RNA–Protein interactions for RNA: ENST00000543697.5

RAP1B-230, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-230ENST00000543697 TMEM106CQ9BVX2 250 aa13.64□□□□□ -0.23
RAP1B-230ENST00000543697 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
RAP1B-230ENST00000543697 MKRN3Q13064 507 aaKnown RBP13.63□□□□□ -0.23
RAP1B-230ENST00000543697 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
RAP1B-230ENST00000543697 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
RAP1B-230ENST00000543697 TULP1O00294 542 aaPredicted RBP13.6□□□□□ -0.23
RAP1B-230ENST00000543697 PRKCSHP14314 528 aaPredicted RBP13.6□□□□□ -0.23
RAP1B-230ENST00000543697 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
RAP1B-230ENST00000543697 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
RAP1B-230ENST00000543697 LMTK3Q96Q04 1460 aa13.58□□□□□ -0.24
RAP1B-230ENST00000543697 ZNF608Q9ULD9 1512 aaPredicted RBP13.58□□□□□ -0.24
RAP1B-230ENST00000543697 PDE4AP27815 886 aa13.57□□□□□ -0.24
RAP1B-230ENST00000543697 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
RAP1B-230ENST00000543697 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
RAP1B-230ENST00000543697 SOCS7O14512 581 aa13.55□□□□□ -0.24
RAP1B-230ENST00000543697 PPP1R37O75864 691 aa13.55□□□□□ -0.24
RAP1B-230ENST00000543697 E2F4Q16254 413 aa13.55□□□□□ -0.24
RAP1B-230ENST00000543697 KCNV2Q8TDN2 545 aa13.55□□□□□ -0.24
RAP1B-230ENST00000543697 CHD1O14646 1710 aa13.55□□□□□ -0.24
RAP1B-230ENST00000543697 URB2Q14146 1524 aaKnown RBP13.54□□□□□ -0.24
RAP1B-230ENST00000543697 MROH2BQ7Z745 1585 aa13.54□□□□□ -0.24
RAP1B-230ENST00000543697 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
RAP1B-230ENST00000543697 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
RAP1B-230ENST00000543697 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
RAP1B-230ENST00000543697 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
RAP1B-230ENST00000543697 MFSD10Q14728 455 aa13.49□□□□□ -0.25
RAP1B-230ENST00000543697 ILDR2Q71H61 639 aa13.49□□□□□ -0.25
RAP1B-230ENST00000543697 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
RAP1B-230ENST00000543697 ARIH1Q9Y4X5 557 aaPredicted RBP13.47□□□□□ -0.25
RAP1B-230ENST00000543697 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
RAP1B-230ENST00000543697 WIZO95785 1651 aa13.44□□□□□ -0.26
RAP1B-230ENST00000543697 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
RAP1B-230ENST00000543697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.44□□□□□ -0.26
RAP1B-230ENST00000543697 HECW2Q9P2P5 1572 aa13.44□□□□□ -0.26
RAP1B-230ENST00000543697 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
RAP1B-230ENST00000543697 HAX1O00165 279 aa13.42□□□□□ -0.26
RAP1B-230ENST00000543697 IER5LQ5T953 404 aa13.42□□□□□ -0.26
RAP1B-230ENST00000543697 LARP6Q9BRS8 491 aaKnown RBP13.42□□□□□ -0.26
RAP1B-230ENST00000543697 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
RAP1B-230ENST00000543697 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
RAP1B-230ENST00000543697 TRPC6Q9Y210 931 aa13.41□□□□□ -0.26
RAP1B-230ENST00000543697 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
RAP1B-230ENST00000543697 SMYD5Q6GMV2 418 aa13.4□□□□□ -0.26
RAP1B-230ENST00000543697 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
RAP1B-230ENST00000543697 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
RAP1B-230ENST00000543697 CAMK2BQ13554 666 aa13.37□□□□□ -0.27
RAP1B-230ENST00000543697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAP1B-230ENST00000543697 GALR2O43603 387 aaPredicted RBP13.36□□□□□ -0.27
RAP1B-230ENST00000543697 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
RAP1B-230ENST00000543697 GPHNQ9NQX3 736 aaPredicted RBP13.34□□□□□ -0.27
RAP1B-230ENST00000543697 ASTLQ6HA08 431 aaPredicted RBP13.33□□□□□ -0.28
RAP1B-230ENST00000543697 TESPA1A2RU30 521 aaPredicted RBP13.32□□□□□ -0.28
RAP1B-230ENST00000543697 G3V3G9 751 aa13.31□□□□□ -0.28
RAP1B-230ENST00000543697 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
RAP1B-230ENST00000543697 CFTRP13569 1480 aa13.29□□□□□ -0.28
RAP1B-230ENST00000543697 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
RAP1B-230ENST00000543697 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
RAP1B-230ENST00000543697 TOP2AP11388 1531 aaKnown RBP13.28□□□□□ -0.28
RAP1B-230ENST00000543697 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
RAP1B-230ENST00000543697 ATMINO43313 823 aaPredicted RBP13.27□□□□□ -0.29
RAP1B-230ENST00000543697 MICALL2Q8IY33 904 aa13.27□□□□□ -0.29
RAP1B-230ENST00000543697 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■□ 26.1
RAP1B-230ENST00000543697 SYNJ2O15056 1496 aa13.26□□□□□ -0.29
RAP1B-230ENST00000543697 IRX5P78411 483 aaPredicted RBP13.26□□□□□ -0.29
RAP1B-230ENST00000543697 PDCD7Q8N8D1 485 aaKnown RBP13.26□□□□□ -0.29
RAP1B-230ENST00000543697 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
RAP1B-230ENST00000543697 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
RAP1B-230ENST00000543697 SPDYE16A6NNV3 312 aaPredicted RBP13.24□□□□□ -0.29
RAP1B-230ENST00000543697 ATN1P54259 1190 aaPredicted RBP13.24□□□□□ -0.29
RAP1B-230ENST00000543697 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
RAP1B-230ENST00000543697 FOXK1P85037 733 aa13.23□□□□□ -0.29
RAP1B-230ENST00000543697 DISP3Q9P2K9 1392 aa13.22□□□□□ -0.29
RAP1B-230ENST00000543697 PLCG2P16885 1265 aa13.22□□□□□ -0.29
RAP1B-230ENST00000543697 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
RAP1B-230ENST00000543697 SEMA3EO15041 775 aa13.21□□□□□ -0.29
RAP1B-230ENST00000543697 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
RAP1B-230ENST00000543697 KDM6BO15054 1643 aa13.18□□□□□ -0.3
RAP1B-230ENST00000543697 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
RAP1B-230ENST00000543697 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
RAP1B-230ENST00000543697 TOPBP1Q92547 1522 aa13.15□□□□□ -0.3
RAP1B-230ENST00000543697 EVX2Q03828 476 aa13.15□□□□□ -0.3
RAP1B-230ENST00000543697 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
RAP1B-230ENST00000543697 DSG2Q14126 1118 aa13.13□□□□□ -0.31
RAP1B-230ENST00000543697 PDIA6Q15084 440 aa13.13□□□□□ -0.31
RAP1B-230ENST00000543697 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
RAP1B-230ENST00000543697 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
RAP1B-230ENST00000543697 SLC39A7Q92504 469 aa13.13□□□□□ -0.31
RAP1B-230ENST00000543697 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
RAP1B-230ENST00000543697 KIF3CO14782 793 aa13.11□□□□□ -0.31
RAP1B-230ENST00000543697 GABBR2O75899 941 aa13.11□□□□□ -0.31
RAP1B-230ENST00000543697 SEC24BO95487 1268 aa13.11□□□□□ -0.31
RAP1B-230ENST00000543697 C7P10643 843 aa13.1□□□□□ -0.31
RAP1B-230ENST00000543697 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
RAP1B-230ENST00000543697 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
RAP1B-230ENST00000543697 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
RAP1B-230ENST00000543697 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
RAP1B-230ENST00000543697 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
RAP1B-230ENST00000543697 C2orf72A6NCS6 295 aa13.06□□□□□ -0.32
RAP1B-230ENST00000543697 ERICH6Q7L0X2 663 aa13.06□□□□□ -0.32
RAP1B-230ENST00000543697 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms