RNA–Protein interactions for RNA: ENST00000543694.1

LRTM2-206, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-206ENST00000543694 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
LRTM2-206ENST00000543694 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
LRTM2-206ENST00000543694 UHRF1BP1Q6BDS2 1440 aa25■■□□□ 1.59
LRTM2-206ENST00000543694 HECW1Q76N89 1606 aa25■■□□□ 1.59
LRTM2-206ENST00000543694 NUP153P49790 1475 aaKnown RBP24.99■■□□□ 1.59
LRTM2-206ENST00000543694 SAMD9Q5K651 1589 aa24.99■■□□□ 1.59
LRTM2-206ENST00000543694 PLEKHD1A6NEE1 506 aa24.96■■□□□ 1.59
LRTM2-206ENST00000543694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.58
LRTM2-206ENST00000543694 CEBPAP49715 358 aaPredicted RBP24.94■■□□□ 1.58
LRTM2-206ENST00000543694 PTPRTO14522 1441 aa24.94■■□□□ 1.58
LRTM2-206ENST00000543694 C9orf84Q5VXU9 1444 aa24.94■■□□□ 1.58
LRTM2-206ENST00000543694 IQSEC2Q5JU85 1478 aa24.93■■□□□ 1.58
LRTM2-206ENST00000543694 ATP10AO60312 1499 aa24.91■■□□□ 1.58
LRTM2-206ENST00000543694 SCAPERQ9BY12 1400 aa24.88■■□□□ 1.57
LRTM2-206ENST00000543694 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
LRTM2-206ENST00000543694 LTBP4Q8N2S1 1624 aa24.86■■□□□ 1.57
LRTM2-206ENST00000543694 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
LRTM2-206ENST00000543694 PLCH2O75038 1416 aa24.78■■□□□ 1.56
LRTM2-206ENST00000543694 RANGAP1P46060 587 aaPredicted RBP24.75■■□□□ 1.55
LRTM2-206ENST00000543694 C3P01024 1663 aa24.75■■□□□ 1.55
LRTM2-206ENST00000543694 ESF1Q9H501 851 aaKnown RBP24.74■■□□□ 1.55
LRTM2-206ENST00000543694 NCOA1Q15788 1441 aa24.74■■□□□ 1.55
LRTM2-206ENST00000543694 ZNF518AQ6AHZ1 1483 aa24.73■■□□□ 1.55
LRTM2-206ENST00000543694 UBAP1LF5GYI3 381 aa24.73■■□□□ 1.55
LRTM2-206ENST00000543694 MYT1LQ9UL68 1186 aa24.73■■□□□ 1.55
LRTM2-206ENST00000543694 MYO5CQ9NQX4 1742 aa24.7■■□□□ 1.54
LRTM2-206ENST00000543694 TRAPPC8Q9Y2L5 1435 aa24.69■■□□□ 1.54
LRTM2-206ENST00000543694 EFCAB2Q5VUJ9 269 aa24.69■■□□□ 1.54
LRTM2-206ENST00000543694 CDK13Q14004 1512 aaKnown RBP24.68■■□□□ 1.54
LRTM2-206ENST00000543694 DIP2CQ9Y2E4 1556 aa24.67■■□□□ 1.54
LRTM2-206ENST00000543694 KDM5CP41229 1560 aa24.66■■□□□ 1.54
LRTM2-206ENST00000543694 REREQ9P2R6 1566 aa24.66■■□□□ 1.54
LRTM2-206ENST00000543694 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
LRTM2-206ENST00000543694 MED1Q15648 1581 aaPredicted RBP24.62■■□□□ 1.53
LRTM2-206ENST00000543694 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
LRTM2-206ENST00000543694 ABCA6Q8N139 1617 aa24.6■■□□□ 1.53
LRTM2-206ENST00000543694 ARHGAP5Q13017 1502 aa24.6■■□□□ 1.53
LRTM2-206ENST00000543694 CNTLNQ9NXG0 1405 aa24.6■■□□□ 1.53
LRTM2-206ENST00000543694 AFAP1Q8N556 730 aa24.59■■□□□ 1.53
LRTM2-206ENST00000543694 AGLP35573 1532 aa24.59■■□□□ 1.53
LRTM2-206ENST00000543694 KIF14Q15058 1648 aa24.55■■□□□ 1.52
LRTM2-206ENST00000543694 SCAF1Q9H7N4 1312 aaKnown RBP24.55■■□□□ 1.52
LRTM2-206ENST00000543694 NCKAP5LQ9HCH0 1330 aa24.53■■□□□ 1.52
LRTM2-206ENST00000543694 NPATQ14207 1427 aa24.52■■□□□ 1.52
LRTM2-206ENST00000543694 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
LRTM2-206ENST00000543694 LOC105371045A0A1W2PR82 267 aa24.51■■□□□ 1.51
LRTM2-206ENST00000543694 CDK11AQ9UQ88 783 aaPredicted RBP24.51■■□□□ 1.51
LRTM2-206ENST00000543694 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
LRTM2-206ENST00000543694 ATP1B4Q9UN42 357 aaPredicted RBP24.49■■□□□ 1.51
LRTM2-206ENST00000543694 MROH2AA6NES4 1674 aa24.48■■□□□ 1.51
LRTM2-206ENST00000543694 UBTFP17480 764 aaKnown RBP24.48■■□□□ 1.51
LRTM2-206ENST00000543694 HSPA1LP34931 641 aa24.48■■□□□ 1.51
LRTM2-206ENST00000543694 PKD2Q13563 968 aa24.48■■□□□ 1.51
LRTM2-206ENST00000543694 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
LRTM2-206ENST00000543694 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
LRTM2-206ENST00000543694 CLIP1P30622 1438 aa24.45■■□□□ 1.51
LRTM2-206ENST00000543694 PIP4K2BP78356 416 aa24.45■■□□□ 1.5
LRTM2-206ENST00000543694 ZNF142P52746 1687 aaPredicted RBP24.44■■□□□ 1.5
LRTM2-206ENST00000543694 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
LRTM2-206ENST00000543694 PPP6R1Q9UPN7 881 aa24.42■■□□□ 1.5
LRTM2-206ENST00000543694 TROQ12816 1431 aaPredicted RBP24.42■■□□□ 1.5
LRTM2-206ENST00000543694 ABCC1P33527 1531 aa24.41■■□□□ 1.5
LRTM2-206ENST00000543694 TCOF1Q13428 1488 aaKnown RBP24.41■■□□□ 1.5
LRTM2-206ENST00000543694 TOM1O60784 492 aa24.41■■□□□ 1.5
LRTM2-206ENST00000543694 CEP170BQ9Y4F5 1589 aaPredicted RBP24.4■■□□□ 1.5
LRTM2-206ENST00000543694 ZMYM3Q14202 1370 aa24.4■■□□□ 1.5
LRTM2-206ENST00000543694 FMN1Q68DA7 1419 aa24.39■■□□□ 1.5
LRTM2-206ENST00000543694 ITSN2Q9NZM3 1697 aa24.39■■□□□ 1.49
LRTM2-206ENST00000543694 CDC42BPBQ9Y5S2 1711 aa24.38■■□□□ 1.49
LRTM2-206ENST00000543694 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
LRTM2-206ENST00000543694 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
LRTM2-206ENST00000543694 CPS1P31327 1500 aa24.34■■□□□ 1.49
LRTM2-206ENST00000543694 CLTCQ00610 1675 aaKnown RBP24.33■■□□□ 1.49
LRTM2-206ENST00000543694 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
LRTM2-206ENST00000543694 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
LRTM2-206ENST00000543694 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
LRTM2-206ENST00000543694 SAMD9LQ8IVG5 1584 aa24.25■■□□□ 1.47
LRTM2-206ENST00000543694 SHANK2Q9UPX8 1470 aa24.24■■□□□ 1.47
LRTM2-206ENST00000543694 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
LRTM2-206ENST00000543694 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
LRTM2-206ENST00000543694 SPAG9O60271 1321 aaKnown RBP24.21■■□□□ 1.47
LRTM2-206ENST00000543694 DNMT1P26358 1616 aaKnown RBP24.2■■□□□ 1.46
LRTM2-206ENST00000543694 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
LRTM2-206ENST00000543694 PLXNC1O60486 1568 aa24.18■■□□□ 1.46
LRTM2-206ENST00000543694 NEURL4Q96JN8 1562 aa24.17■■□□□ 1.46
LRTM2-206ENST00000543694 ATP7AQ04656 1500 aa24.17■■□□□ 1.46
LRTM2-206ENST00000543694 SYCP2Q9BX26 1530 aa24.17■■□□□ 1.46
LRTM2-206ENST00000543694 GGT6Q6P531 493 aa24.17■■□□□ 1.46
LRTM2-206ENST00000543694 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
LRTM2-206ENST00000543694 ARHGAP35Q9NRY4 1499 aa24.17■■□□□ 1.46
LRTM2-206ENST00000543694 CDC42BPAQ5VT25 1732 aa24.16■■□□□ 1.46
LRTM2-206ENST00000543694 A2MP01023 1474 aa24.16■■□□□ 1.46
LRTM2-206ENST00000543694 ZNF777Q9ULD5 760 aaPredicted RBP24.16■■□□□ 1.46
LRTM2-206ENST00000543694 CCDC18Q5T9S5 1454 aa24.12■■□□□ 1.45
LRTM2-206ENST00000543694 ALKQ9UM73 1620 aa24.11■■□□□ 1.45
LRTM2-206ENST00000543694 VWDEQ8N2E2 1590 aa24.11■■□□□ 1.45
LRTM2-206ENST00000543694 INO80Q9ULG1 1556 aaPredicted RBP24.11■■□□□ 1.45
LRTM2-206ENST00000543694 TNRQ92752 1358 aa24.06■■□□□ 1.44
LRTM2-206ENST00000543694 HNRNPMP52272 730 aaKnown RBP eCLIP24.06■■□□□ 1.44
LRTM2-206ENST00000543694 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms