RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 CCDC136Q96JN2 1154 aa32.17■■■□□ 2.74
SHD-201ENST00000543264 ARHGEF11O15085 1522 aa32.17■■■□□ 2.74
SHD-201ENST00000543264 TCOF1Q13428 1488 aaKnown RBP32.17■■■□□ 2.74
SHD-201ENST00000543264 THOC2Q8NI27 1593 aaKnown RBP32.17■■■□□ 2.74
SHD-201ENST00000543264 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
SHD-201ENST00000543264 SMG6Q86US8 1419 aaKnown RBP32.14■■■□□ 2.74
SHD-201ENST00000543264 DNAJC5BQ9UF47 199 aa32.13■■■□□ 2.73
SHD-201ENST00000543264 NUDCQ9Y266 331 aa32.12■■■□□ 2.73
SHD-201ENST00000543264 SENP3-EIF4A1A0A087X0R7 540 aa32.11■■■□□ 2.73
SHD-201ENST00000543264 ANP32AP39687 249 aaKnown RBP32.11■■■□□ 2.73
SHD-201ENST00000543264 ANKRD30BQ9BXX2 1392 aa32.1■■■□□ 2.73
SHD-201ENST00000543264 POLR3GLQ9BT43 218 aa32.1■■■□□ 2.73
SHD-201ENST00000543264 SPATA31E1Q6ZUB1 1445 aa32.09■■■□□ 2.73
SHD-201ENST00000543264 IPO9Q96P70 1041 aaKnown RBP32.08■■■□□ 2.73
SHD-201ENST00000543264 RPRD2Q5VT52 1461 aaKnown RBP32.07■■■□□ 2.73
SHD-201ENST00000543264 ARID3CA6NKF2 412 aa32.06■■■□□ 2.72
SHD-201ENST00000543264 NESP48681 1621 aa32.04■■■□□ 2.72
SHD-201ENST00000543264 ZBTB47Q9UFB7 747 aaPredicted RBP32.03■■■□□ 2.72
SHD-201ENST00000543264 RNF123Q5XPI4 1314 aa32.03■■■□□ 2.72
SHD-201ENST00000543264 SLC4A1APQ9BWU0 796 aaKnown RBP32.03■■■□□ 2.72
SHD-201ENST00000543264 TEX14Q8IWB6 1497 aa32.02■■■□□ 2.72
SHD-201ENST00000543264 MIA2Q96PC5 1412 aa31.99■■■□□ 2.71
SHD-201ENST00000543264 GAPVD1Q14C86 1478 aa31.98■■■□□ 2.71
SHD-201ENST00000543264 DHX29Q7Z478 1369 aaKnown RBP31.98■■■□□ 2.71
SHD-201ENST00000543264 ABCA5Q8WWZ7 1642 aa31.98■■■□□ 2.71
SHD-201ENST00000543264 RTL5Q5HYW3 569 aaPredicted RBP31.98■■■□□ 2.71
SHD-201ENST00000543264 POLR1AO95602 1720 aaPredicted RBP31.96■■■□□ 2.71
SHD-201ENST00000543264 EPRSP07814 1512 aaKnown RBP31.93■■■□□ 2.7
SHD-201ENST00000543264 ZNF326Q5BKZ1 582 aaKnown RBP31.92■■■□□ 2.7
SHD-201ENST00000543264 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
SHD-201ENST00000543264 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
SHD-201ENST00000543264 KIF21AQ7Z4S6 1674 aa31.89■■■□□ 2.69
SHD-201ENST00000543264 TMC1Q8TDI8 760 aa31.88■■■□□ 2.69
SHD-201ENST00000543264 PNISRQ8TF01 805 aaKnown RBP31.87■■■□□ 2.69
SHD-201ENST00000543264 DAPK1P53355 1430 aa31.87■■■□□ 2.69
SHD-201ENST00000543264 ROCK1Q13464 1354 aa31.85■■■□□ 2.69
SHD-201ENST00000543264 ZNF644Q9H582 1327 aaPredicted RBP31.85■■■□□ 2.69
SHD-201ENST00000543264 USP47Q96K76 1375 aa31.84■■■□□ 2.69
SHD-201ENST00000543264 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
SHD-201ENST00000543264 NPM2Q86SE8 214 aaKnown RBP31.82■■■□□ 2.68
SHD-201ENST00000543264 ABCC5O15440 1437 aa31.81■■■□□ 2.68
SHD-201ENST00000543264 BCORL1Q5H9F3 1711 aa31.8■■■□□ 2.68
SHD-201ENST00000543264 EXOC6Q8TAG9 804 aa31.73■■■□□ 2.67
SHD-201ENST00000543264 DNMT1P26358 1616 aaKnown RBP31.71■■■□□ 2.67
SHD-201ENST00000543264 RRP1P56182 461 aaKnown RBP31.7■■■□□ 2.67
SHD-201ENST00000543264 ARID4BQ4LE39 1312 aaPredicted RBP31.7■■■□□ 2.67
SHD-201ENST00000543264 PZPP20742 1482 aa31.69■■■□□ 2.66
SHD-201ENST00000543264 WDR62O43379 1518 aa31.68■■■□□ 2.66
SHD-201ENST00000543264 SALL2Q9Y467 1007 aaPredicted RBP31.67■■■□□ 2.66
SHD-201ENST00000543264 MBD5Q9P267 1494 aa31.67■■■□□ 2.66
SHD-201ENST00000543264 TCERG1O14776 1098 aaKnown RBP31.66■■■□□ 2.66
SHD-201ENST00000543264 LAS1LQ9Y4W2 734 aaKnown RBP31.66■■■□□ 2.66
SHD-201ENST00000543264 IQGAP2Q13576 1575 aa31.65■■■□□ 2.66
SHD-201ENST00000543264 PDE4AP27815 886 aa31.65■■■□□ 2.66
SHD-201ENST00000543264 PKD2Q13563 968 aa31.64■■■□□ 2.66
SHD-201ENST00000543264 ROCK2O75116 1388 aaKnown RBP31.63■■■□□ 2.65
SHD-201ENST00000543264 RCAN3Q9UKA8 241 aa31.63■■■□□ 2.65
SHD-201ENST00000543264 KIF15Q9NS87 1388 aa31.62■■■□□ 2.65
SHD-201ENST00000543264 KDM5CP41229 1560 aa31.62■■■□□ 2.65
SHD-201ENST00000543264 LRPPRCP42704 1394 aaKnown RBP31.62■■■□□ 2.65
SHD-201ENST00000543264 CARD11Q9BXL7 1154 aa31.62■■■□□ 2.65
SHD-201ENST00000543264 IL27Q8NEV9 243 aa31.61■■■□□ 2.65
SHD-201ENST00000543264 KIAA1107Q9UPP5 1409 aa31.61■■■□□ 2.65
SHD-201ENST00000543264 NEFMP07197 916 aa31.61■■■□□ 2.65
SHD-201ENST00000543264 ANO8Q9HCE9 1232 aaPredicted RBP31.6■■■□□ 2.65
SHD-201ENST00000543264 MYBBP1AQ9BQG0 1328 aaKnown RBP31.58■■■□□ 2.65
SHD-201ENST00000543264 BRD4O60885 1362 aaPredicted RBP31.57■■■□□ 2.64
SHD-201ENST00000543264 BACH2Q9BYV9 841 aa31.57■■■□□ 2.64
SHD-201ENST00000543264 KIF14Q15058 1648 aa31.56■■■□□ 2.64
SHD-201ENST00000543264 ST20-MTHFSA0A0A6YYL1 179 aa31.54■■■□□ 2.64
SHD-201ENST00000543264 RALBP1Q15311 655 aa31.54■■■□□ 2.64
SHD-201ENST00000543264 ZNF777Q9ULD5 760 aaPredicted RBP31.53■■■□□ 2.64
SHD-201ENST00000543264 RTN4Q9NQC3 1192 aaKnown RBP31.52■■■□□ 2.64
SHD-201ENST00000543264 CFDP1Q9UEE9 299 aaPredicted RBP31.52■■■□□ 2.64
SHD-201ENST00000543264 KDM2AQ9Y2K7 1162 aa31.52■■■□□ 2.64
SHD-201ENST00000543264 PRKCSHP14314 528 aaPredicted RBP31.5■■■□□ 2.63
SHD-201ENST00000543264 MS4A1P11836 297 aa31.49■■■□□ 2.63
SHD-201ENST00000543264 USP35Q9P2H5 1018 aa31.49■■■□□ 2.63
SHD-201ENST00000543264 TARBP1Q13395 1621 aaKnown RBP31.47■■■□□ 2.63
SHD-201ENST00000543264 PDS5BQ9NTI5 1447 aa31.46■■■□□ 2.63
SHD-201ENST00000543264 RALGAPBQ86X10 1494 aa31.45■■■□□ 2.63
SHD-201ENST00000543264 CDCA7LQ96GN5 454 aa31.44■■■□□ 2.62
SHD-201ENST00000543264 KTN1Q86UP2 1357 aaKnown RBP31.44■■■□□ 2.62
SHD-201ENST00000543264 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
SHD-201ENST00000543264 UHRF1BP1Q6BDS2 1440 aa31.44■■■□□ 2.62
SHD-201ENST00000543264 NUP153P49790 1475 aaKnown RBP31.43■■■□□ 2.62
SHD-201ENST00000543264 PPM1GO15355 546 aaPredicted RBP31.43■■■□□ 2.62
SHD-201ENST00000543264 PDE3BQ13370 1112 aa31.43■■■□□ 2.62
SHD-201ENST00000543264 PLIN1O60240 522 aa31.42■■■□□ 2.62
SHD-201ENST00000543264 PBRM1Q86U86 1689 aa31.42■■■□□ 2.62
SHD-201ENST00000543264 NLRP13Q86W25 1043 aa31.4■■■□□ 2.62
SHD-201ENST00000543264 SKAP1Q86WV1 359 aa31.4■■■□□ 2.62
SHD-201ENST00000543264 PRG4Q92954 1404 aaPredicted RBP31.39■■■□□ 2.62
SHD-201ENST00000543264 DCAF11Q8TEB1 546 aa31.38■■■□□ 2.61
SHD-201ENST00000543264 ANKRD30AQ9BXX3 1397 aa31.37■■■□□ 2.61
SHD-201ENST00000543264 NUP155O75694 1391 aa31.36■■■□□ 2.61
SHD-201ENST00000543264 ADAMTS12P58397 1594 aa31.36■■■□□ 2.61
SHD-201ENST00000543264 ADGBQ8N7X0 1667 aa31.35■■■□□ 2.61
SHD-201ENST00000543264 ANKRD50Q9ULJ7 1429 aa31.34■■■□□ 2.61
SHD-201ENST00000543264 CRBNQ96SW2 442 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms