RNA–Protein interactions for RNA: ENST00000543014.1

NEK8-202, Transcript of NIMA related kinase 8, humanhuman

TSL 2

Gene NEK8, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-202ENST00000543014 TRIM52Q96A61 297 aa28.54■■■□□ 2.16
NEK8-202ENST00000543014 ZNF644Q9H582 1327 aaPredicted RBP28.53■■■□□ 2.16
NEK8-202ENST00000543014 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
NEK8-202ENST00000543014 KIF14Q15058 1648 aa28.52■■■□□ 2.16
NEK8-202ENST00000543014 CFDP1Q9UEE9 299 aaPredicted RBP28.52■■■□□ 2.16
NEK8-202ENST00000543014 DENND4BO75064 1496 aaPredicted RBP28.5■■■□□ 2.15
NEK8-202ENST00000543014 CAMSAP2Q08AD1 1489 aa28.5■■■□□ 2.15
NEK8-202ENST00000543014 ATP10BO94823 1461 aa28.49■■■□□ 2.15
NEK8-202ENST00000543014 PLEKHD1A6NEE1 506 aa28.48■■■□□ 2.15
NEK8-202ENST00000543014 MPHOSPH9Q99550 1183 aa28.46■■■□□ 2.15
NEK8-202ENST00000543014 PTPRGP23470 1445 aa28.44■■■□□ 2.14
NEK8-202ENST00000543014 CHD1O14646 1710 aa28.44■■■□□ 2.14
NEK8-202ENST00000543014 GTF3C3Q9Y5Q9 886 aa28.42■■■□□ 2.14
NEK8-202ENST00000543014 KDM5BQ9UGL1 1544 aa28.4■■■□□ 2.14
NEK8-202ENST00000543014 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.14
NEK8-202ENST00000543014 ADGBQ8N7X0 1667 aa28.38■■■□□ 2.13
NEK8-202ENST00000543014 ADGRL2O95490 1459 aa28.37■■■□□ 2.13
NEK8-202ENST00000543014 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
NEK8-202ENST00000543014 CROCC2H7BZ55 1655 aa28.36■■■□□ 2.13
NEK8-202ENST00000543014 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
NEK8-202ENST00000543014 ZNF777Q9ULD5 760 aaPredicted RBP28.36■■■□□ 2.13
NEK8-202ENST00000543014 CDC42BPAQ5VT25 1732 aa28.34■■■□□ 2.13
NEK8-202ENST00000543014 DDX10Q13206 875 aaKnown RBP28.31■■■□□ 2.12
NEK8-202ENST00000543014 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
NEK8-202ENST00000543014 ANKRD30BQ9BXX2 1392 aa28.29■■■□□ 2.12
NEK8-202ENST00000543014 SHANK2Q9UPX8 1470 aa28.27■■■□□ 2.12
NEK8-202ENST00000543014 HIRIP3Q9BW71 556 aaPredicted RBP28.26■■■□□ 2.11
NEK8-202ENST00000543014 SLC4A1APQ9BWU0 796 aaKnown RBP28.26■■■□□ 2.11
NEK8-202ENST00000543014 RPRD2Q5VT52 1461 aaKnown RBP28.24■■■□□ 2.11
NEK8-202ENST00000543014 FOXD1Q16676 465 aa28.24■■■□□ 2.11
NEK8-202ENST00000543014 PZPP20742 1482 aa28.21■■■□□ 2.11
NEK8-202ENST00000543014 C9orf84Q5VXU9 1444 aa28.19■■■□□ 2.1
NEK8-202ENST00000543014 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
NEK8-202ENST00000543014 ANKRD50Q9ULJ7 1429 aa28.18■■■□□ 2.1
NEK8-202ENST00000543014 ARHGEF5Q12774 1597 aa28.17■■■□□ 2.1
NEK8-202ENST00000543014 TSPY4P0CV99 314 aa28.15■■■□□ 2.1
NEK8-202ENST00000543014 TSPY10P0CW01 314 aa28.15■■■□□ 2.1
NEK8-202ENST00000543014 ABCC2Q92887 1545 aa28.15■■■□□ 2.1
NEK8-202ENST00000543014 PREX2Q70Z35 1606 aa28.14■■■□□ 2.1
NEK8-202ENST00000543014 TEX14Q8IWB6 1497 aa28.13■■■□□ 2.09
NEK8-202ENST00000543014 ERCC6L2Q5T890 1561 aa28.13■■■□□ 2.09
NEK8-202ENST00000543014 KIAA1107Q9UPP5 1409 aa28.12■■■□□ 2.09
NEK8-202ENST00000543014 MBD5Q9P267 1494 aa28.11■■■□□ 2.09
NEK8-202ENST00000543014 CLASP1Q7Z460 1538 aa28.11■■■□□ 2.09
NEK8-202ENST00000543014 CDC42BPBQ9Y5S2 1711 aa28.1■■■□□ 2.09
NEK8-202ENST00000543014 RSPH4AQ5TD94 716 aa28.09■■■□□ 2.09
NEK8-202ENST00000543014 SAMD9LQ8IVG5 1584 aa28.08■■■□□ 2.09
NEK8-202ENST00000543014 HNRNPMP52272 730 aaKnown RBP eCLIP28.08■■■□□ 2.09
NEK8-202ENST00000543014 EIF4G2P78344 907 aaKnown RBP eCLIP28.08■■■□□ 2.09
NEK8-202ENST00000543014 ANP32CO43423 234 aa28.07■■■□□ 2.08
NEK8-202ENST00000543014 HSPA5P11021 654 aaKnown RBP28.07■■■□□ 2.08
NEK8-202ENST00000543014 CCDC141Q6ZP82 1450 aa28.07■■■□□ 2.08
NEK8-202ENST00000543014 CCER2I3L3R5 266 aa28.04■■■□□ 2.08
NEK8-202ENST00000543014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
NEK8-202ENST00000543014 KDM5DQ9BY66 1539 aa28.03■■■□□ 2.08
NEK8-202ENST00000543014 KIF15Q9NS87 1388 aa28.03■■■□□ 2.08
NEK8-202ENST00000543014 PKD2Q13563 968 aa28.03■■■□□ 2.08
NEK8-202ENST00000543014 KCNH8Q96L42 1107 aa28.03■■■□□ 2.08
NEK8-202ENST00000543014 TTC37Q6PGP7 1564 aa28.02■■■□□ 2.08
NEK8-202ENST00000543014 UHRF1BP1LA0JNW5 1464 aa28.01■■■□□ 2.07
NEK8-202ENST00000543014 NUP155O75694 1391 aa28■■■□□ 2.07
NEK8-202ENST00000543014 ARHGAP5Q13017 1502 aa27.99■■■□□ 2.07
NEK8-202ENST00000543014 NBPF8Q3BBV2 869 aa27.99■■■□□ 2.07
NEK8-202ENST00000543014 WASHC2AQ641Q2 1341 aa27.96■■■□□ 2.07
NEK8-202ENST00000543014 PLEKHH2Q8IVE3 1493 aa27.95■■■□□ 2.07
NEK8-202ENST00000543014 MAST1Q9Y2H9 1570 aa27.95■■■□□ 2.06
NEK8-202ENST00000543014 MYO5CQ9NQX4 1742 aa27.95■■■□□ 2.06
NEK8-202ENST00000543014 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.06
NEK8-202ENST00000543014 ZCCHC11Q5TAX3 1644 aaKnown RBP27.93■■■□□ 2.06
NEK8-202ENST00000543014 SPATA31E1Q6ZUB1 1445 aa27.87■■■□□ 2.05
NEK8-202ENST00000543014 PLCH2O75038 1416 aa27.86■■■□□ 2.05
NEK8-202ENST00000543014 PLXNC1O60486 1568 aa27.84■■■□□ 2.05
NEK8-202ENST00000543014 CCDC7Q96M83 1385 aa27.83■■■□□ 2.05
NEK8-202ENST00000543014 CNTLNQ9NXG0 1405 aa27.82■■■□□ 2.04
NEK8-202ENST00000543014 FAM135AQ9P2D6 1515 aa27.82■■■□□ 2.04
NEK8-202ENST00000543014 ARHGEF12Q9NZN5 1544 aa27.81■■■□□ 2.04
NEK8-202ENST00000543014 EFCAB2Q5VUJ9 269 aa27.8■■■□□ 2.04
NEK8-202ENST00000543014 UHRF1BP1Q6BDS2 1440 aa27.8■■■□□ 2.04
NEK8-202ENST00000543014 UNC13BO14795 1591 aa27.79■■■□□ 2.04
NEK8-202ENST00000543014 C11orf95C9JLR9 678 aaPredicted RBP27.77■■■□□ 2.04
NEK8-202ENST00000543014 POLR1AO95602 1720 aaPredicted RBP27.75■■■□□ 2.03
NEK8-202ENST00000543014 DUOX2Q9NRD8 1548 aa27.75■■■□□ 2.03
NEK8-202ENST00000543014 ABCC1P33527 1531 aa27.73■■■□□ 2.03
NEK8-202ENST00000543014 ARAP3Q8WWN8 1544 aa27.73■■■□□ 2.03
NEK8-202ENST00000543014 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
NEK8-202ENST00000543014 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
NEK8-202ENST00000543014 ERBINQ96RT1 1412 aa27.71■■■□□ 2.03
NEK8-202ENST00000543014 ZNF326Q5BKZ1 582 aaKnown RBP27.71■■■□□ 2.03
NEK8-202ENST00000543014 KIF7Q2M1P5 1343 aa27.7■■■□□ 2.03
NEK8-202ENST00000543014 USP47Q96K76 1375 aa27.7■■■□□ 2.02
NEK8-202ENST00000543014 IQGAP3Q86VI3 1631 aa27.68■■■□□ 2.02
NEK8-202ENST00000543014 WDR7Q9Y4E6 1490 aa27.66■■■□□ 2.02
NEK8-202ENST00000543014 KDM5CP41229 1560 aa27.66■■■□□ 2.02
NEK8-202ENST00000543014 CCDC144AA2RUR9 1427 aa27.65■■■□□ 2.02
NEK8-202ENST00000543014 MAGI2Q86UL8 1455 aa27.65■■■□□ 2.02
NEK8-202ENST00000543014 TRAPPC8Q9Y2L5 1435 aa27.64■■■□□ 2.01
NEK8-202ENST00000543014 SUPT16HQ9Y5B9 1047 aaKnown RBP27.63■■■□□ 2.01
NEK8-202ENST00000543014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.62■■■□□ 2.011e-6■■■■■ 29.5
NEK8-202ENST00000543014 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
NEK8-202ENST00000543014 RTEL1-TNFRSF6BF6WH68 1400 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms