RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 EEA1Q15075 1411 aa30.15■■■□□ 2.42
RAP1B-228ENST00000542145 SCAPERQ9BY12 1400 aa30.14■■■□□ 2.42
RAP1B-228ENST00000542145 PLCH2O75038 1416 aa30.13■■■□□ 2.41
RAP1B-228ENST00000542145 ARHGEF12Q9NZN5 1544 aa30.07■■■□□ 2.4
RAP1B-228ENST00000542145 ATP10AO60312 1499 aa30.07■■■□□ 2.4
RAP1B-228ENST00000542145 PREX1Q8TCU6 1659 aa30.04■■■□□ 2.4
RAP1B-228ENST00000542145 MYO5CQ9NQX4 1742 aa30.04■■■□□ 2.4
RAP1B-228ENST00000542145 CEBPAP49715 358 aaPredicted RBP30.03■■■□□ 2.4
RAP1B-228ENST00000542145 C9orf84Q5VXU9 1444 aa30.02■■■□□ 2.4
RAP1B-228ENST00000542145 EFCAB2Q5VUJ9 269 aa30.01■■■□□ 2.39
RAP1B-228ENST00000542145 STRCQ7RTU9 1775 aa29.99■■■□□ 2.39
RAP1B-228ENST00000542145 ATP1B4Q9UN42 357 aaPredicted RBP29.98■■■□□ 2.39
RAP1B-228ENST00000542145 SETD1BQ9UPS6 1966 aaKnown RBP29.97■■■□□ 2.39
RAP1B-228ENST00000542145 KIF14Q15058 1648 aa29.94■■■□□ 2.38
RAP1B-228ENST00000542145 AFAP1Q8N556 730 aa29.91■■■□□ 2.38
RAP1B-228ENST00000542145 ZNF518AQ6AHZ1 1483 aa29.9■■■□□ 2.38
RAP1B-228ENST00000542145 FMN1Q68DA7 1419 aa29.88■■■□□ 2.37
RAP1B-228ENST00000542145 CDK11AQ9UQ88 783 aaPredicted RBP29.88■■■□□ 2.37
RAP1B-228ENST00000542145 DMRT2Q9Y5R5 561 aa29.88■■■□□ 2.37
RAP1B-228ENST00000542145 KDM5CP41229 1560 aa29.88■■■□□ 2.37
RAP1B-228ENST00000542145 EHMT2Q96KQ7 1210 aa29.87■■■□□ 2.37
RAP1B-228ENST00000542145 ARHGAP5Q13017 1502 aa29.86■■■□□ 2.37
RAP1B-228ENST00000542145 UHRF1BP1Q6BDS2 1440 aa29.85■■■□□ 2.37
RAP1B-228ENST00000542145 ARHGAP35Q9NRY4 1499 aa29.85■■■□□ 2.37
RAP1B-228ENST00000542145 UBTFP17480 764 aaKnown RBP29.84■■■□□ 2.37
RAP1B-228ENST00000542145 DIP2CQ9Y2E4 1556 aa29.84■■■□□ 2.37
RAP1B-228ENST00000542145 LRRIQ1Q96JM4 1722 aa29.83■■■□□ 2.37
RAP1B-228ENST00000542145 TROQ12816 1431 aaPredicted RBP29.83■■■□□ 2.37
RAP1B-228ENST00000542145 MYT1LQ9UL68 1186 aa29.83■■■□□ 2.37
RAP1B-228ENST00000542145 ILDR2Q71H61 639 aa29.82■■■□□ 2.36
RAP1B-228ENST00000542145 CDC42BPBQ9Y5S2 1711 aa29.82■■■□□ 2.36
RAP1B-228ENST00000542145 C3P01024 1663 aa29.82■■■□□ 2.36
RAP1B-228ENST00000542145 DISP3Q9P2K9 1392 aa29.81■■■□□ 2.36
RAP1B-228ENST00000542145 REREQ9P2R6 1566 aa29.79■■■□□ 2.36
RAP1B-228ENST00000542145 ABCA6Q8N139 1617 aa29.78■■■□□ 2.36
RAP1B-228ENST00000542145 CLIP1P30622 1438 aa29.75■■■□□ 2.35
RAP1B-228ENST00000542145 MLH3Q9UHC1 1453 aa29.74■■■□□ 2.35
RAP1B-228ENST00000542145 PTPRTO14522 1441 aa29.73■■■□□ 2.35
RAP1B-228ENST00000542145 TRAPPC8Q9Y2L5 1435 aa29.71■■■□□ 2.35
RAP1B-228ENST00000542145 AGLP35573 1532 aa29.7■■■□□ 2.34
RAP1B-228ENST00000542145 PREX2Q70Z35 1606 aa29.68■■■□□ 2.34
RAP1B-228ENST00000542145 SOCS7O14512 581 aa29.68■■■□□ 2.34
RAP1B-228ENST00000542145 ITSN2Q9NZM3 1697 aa29.68■■■□□ 2.34
RAP1B-228ENST00000542145 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
RAP1B-228ENST00000542145 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
RAP1B-228ENST00000542145 ABCC1P33527 1531 aa29.66■■■□□ 2.34
RAP1B-228ENST00000542145 KIDINS220Q9ULH0 1771 aa29.66■■■□□ 2.34
RAP1B-228ENST00000542145 CDC42BPAQ5VT25 1732 aa29.61■■■□□ 2.33
RAP1B-228ENST00000542145 NCOA1Q15788 1441 aa29.59■■■□□ 2.33
RAP1B-228ENST00000542145 SPATA31D1Q6ZQQ2 1576 aa29.59■■■□□ 2.33
RAP1B-228ENST00000542145 CNTLNQ9NXG0 1405 aa29.57■■■□□ 2.32
RAP1B-228ENST00000542145 IQSEC2Q5JU85 1478 aa29.54■■■□□ 2.32
RAP1B-228ENST00000542145 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
RAP1B-228ENST00000542145 CASKIN1Q8WXD9 1431 aa29.53■■■□□ 2.32
RAP1B-228ENST00000542145 CAMSAP1Q5T5Y3 1602 aa29.53■■■□□ 2.32
RAP1B-228ENST00000542145 CCDC18Q5T9S5 1454 aa29.52■■■□□ 2.32
RAP1B-228ENST00000542145 SAMD9LQ8IVG5 1584 aa29.52■■■□□ 2.32
RAP1B-228ENST00000542145 SUPT6HQ7KZ85 1726 aaKnown RBP29.5■■■□□ 2.31
RAP1B-228ENST00000542145 NPATQ14207 1427 aa29.49■■■□□ 2.31
RAP1B-228ENST00000542145 ZMYM3Q14202 1370 aa29.49■■■□□ 2.31
RAP1B-228ENST00000542145 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
RAP1B-228ENST00000542145 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.31
RAP1B-228ENST00000542145 HNRNPMP52272 730 aaKnown RBP eCLIP29.43■■■□□ 2.3
RAP1B-228ENST00000542145 SYCP2Q9BX26 1530 aa29.43■■■□□ 2.3
RAP1B-228ENST00000542145 CLTCQ00610 1675 aaKnown RBP29.43■■■□□ 2.3
RAP1B-228ENST00000542145 SPAG9O60271 1321 aaKnown RBP29.43■■■□□ 2.3
RAP1B-228ENST00000542145 ZNF335Q9H4Z2 1342 aaPredicted RBP29.41■■■□□ 2.3
RAP1B-228ENST00000542145 GPATCH8Q9UKJ3 1502 aaKnown RBP29.4■■■□□ 2.3
RAP1B-228ENST00000542145 CHIC1Q5VXU3 224 aa29.4■■■□□ 2.3
RAP1B-228ENST00000542145 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
RAP1B-228ENST00000542145 ATP7AQ04656 1500 aa29.37■■■□□ 2.29
RAP1B-228ENST00000542145 MYO3AQ8NEV4 1616 aa29.36■■■□□ 2.29
RAP1B-228ENST00000542145 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
RAP1B-228ENST00000542145 UBAP1LF5GYI3 381 aa29.35■■■□□ 2.29
RAP1B-228ENST00000542145 PLXNC1O60486 1568 aa29.35■■■□□ 2.29
RAP1B-228ENST00000542145 INO80Q9ULG1 1556 aaPredicted RBP29.34■■■□□ 2.29
RAP1B-228ENST00000542145 PTPRKQ15262 1439 aa29.33■■■□□ 2.29
RAP1B-228ENST00000542145 CEP170BQ9Y4F5 1589 aaPredicted RBP29.32■■■□□ 2.28
RAP1B-228ENST00000542145 A2MP01023 1474 aa29.32■■■□□ 2.28
RAP1B-228ENST00000542145 PLA2R1Q13018 1463 aa29.32■■■□□ 2.28
RAP1B-228ENST00000542145 PKD2Q13563 968 aa29.32■■■□□ 2.28
RAP1B-228ENST00000542145 KIAA1107Q9UPP5 1409 aa29.31■■■□□ 2.28
RAP1B-228ENST00000542145 GGT6Q6P531 493 aa29.31■■■□□ 2.28
RAP1B-228ENST00000542145 TCOF1Q13428 1488 aaKnown RBP29.3■■■□□ 2.28
RAP1B-228ENST00000542145 CFDP1Q9UEE9 299 aaPredicted RBP29.29■■■□□ 2.28
RAP1B-228ENST00000542145 PLEKHH2Q8IVE3 1493 aa29.27■■■□□ 2.28
RAP1B-228ENST00000542145 ADGBQ8N7X0 1667 aa29.24■■■□□ 2.27
RAP1B-228ENST00000542145 CCNB3Q8WWL7 1395 aa29.23■■■□□ 2.27
RAP1B-228ENST00000542145 PPP6R1Q9UPN7 881 aa29.21■■■□□ 2.27
RAP1B-228ENST00000542145 DNMT1P26358 1616 aaKnown RBP29.19■■■□□ 2.26
RAP1B-228ENST00000542145 A2ML1A8K2U0 1454 aa29.17■■■□□ 2.26
RAP1B-228ENST00000542145 ZNF644Q9H582 1327 aaPredicted RBP29.17■■■□□ 2.26
RAP1B-228ENST00000542145 POLR1AO95602 1720 aaPredicted RBP29.13■■■□□ 2.25
RAP1B-228ENST00000542145 MTUS2Q5JR59 1369 aa29.13■■■□□ 2.25
RAP1B-228ENST00000542145 MBD5Q9P267 1494 aa29.11■■■□□ 2.25
RAP1B-228ENST00000542145 TIAM1Q13009 1591 aa29.09■■■□□ 2.25
RAP1B-228ENST00000542145 HSPA1LP34931 641 aa29.09■■■□□ 2.25
RAP1B-228ENST00000542145 FBXO31Q5XUX0 539 aaPredicted RBP29.09■■■□□ 2.25
RAP1B-228ENST00000542145 NEURL4Q96JN8 1562 aa29.09■■■□□ 2.25
RAP1B-228ENST00000542145 SCAF1Q9H7N4 1312 aaKnown RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms