RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 CAMSAP2Q08AD1 1489 aa15.6■□□□□ 0.09
NECAP1-206ENST00000542095 CENPBP07199 599 aaPredicted RBP15.6■□□□□ 0.09
NECAP1-206ENST00000542095 ADGBQ8N7X0 1667 aa15.59■□□□□ 0.09
NECAP1-206ENST00000542095 CDC42BPAQ5VT25 1732 aa15.59■□□□□ 0.09
NECAP1-206ENST00000542095 PTPRGP23470 1445 aa15.58■□□□□ 0.08
NECAP1-206ENST00000542095 CROCC2H7BZ55 1655 aa15.58■□□□□ 0.08
NECAP1-206ENST00000542095 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
NECAP1-206ENST00000542095 TONSLQ96HA7 1378 aa15.58■□□□□ 0.08
NECAP1-206ENST00000542095 CFDP1Q9UEE9 299 aaPredicted RBP15.57■□□□□ 0.08
NECAP1-206ENST00000542095 ZNF644Q9H582 1327 aaPredicted RBP15.57■□□□□ 0.08
NECAP1-206ENST00000542095 PPP1R15AO75807 674 aaPredicted RBP15.56■□□□□ 0.08
NECAP1-206ENST00000542095 TRIM52Q96A61 297 aa15.55■□□□□ 0.08
NECAP1-206ENST00000542095 ABCC10Q5T3U5 1492 aa15.54■□□□□ 0.08
NECAP1-206ENST00000542095 DENND4BO75064 1496 aaPredicted RBP15.52■□□□□ 0.08
NECAP1-206ENST00000542095 ADGRL2O95490 1459 aa15.5■□□□□ 0.07
NECAP1-206ENST00000542095 MPHOSPH9Q99550 1183 aa15.5■□□□□ 0.07
NECAP1-206ENST00000542095 ZNF777Q9ULD5 760 aaPredicted RBP15.49■□□□□ 0.07
NECAP1-206ENST00000542095 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
NECAP1-206ENST00000542095 NCOA1Q15788 1441 aa15.48■□□□□ 0.07
NECAP1-206ENST00000542095 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
NECAP1-206ENST00000542095 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
NECAP1-206ENST00000542095 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
NECAP1-206ENST00000542095 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
NECAP1-206ENST00000542095 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
NECAP1-206ENST00000542095 KDM5BQ9UGL1 1544 aa15.46■□□□□ 0.07
NECAP1-206ENST00000542095 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.06
NECAP1-206ENST00000542095 ANKRD30AQ9BXX3 1397 aa15.45■□□□□ 0.06
NECAP1-206ENST00000542095 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
NECAP1-206ENST00000542095 ARHGEF5Q12774 1597 aa15.44■□□□□ 0.06
NECAP1-206ENST00000542095 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
NECAP1-206ENST00000542095 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
NECAP1-206ENST00000542095 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
NECAP1-206ENST00000542095 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
NECAP1-206ENST00000542095 PZPP20742 1482 aa15.4■□□□□ 0.06
NECAP1-206ENST00000542095 MYO5CQ9NQX4 1742 aa15.4■□□□□ 0.06
NECAP1-206ENST00000542095 TTC37Q6PGP7 1564 aa15.39■□□□□ 0.05
NECAP1-206ENST00000542095 RPRD2Q5VT52 1461 aaKnown RBP15.39■□□□□ 0.05
NECAP1-206ENST00000542095 ANKRD50Q9ULJ7 1429 aa15.39■□□□□ 0.05
NECAP1-206ENST00000542095 ZCCHC11Q5TAX3 1644 aaKnown RBP15.38■□□□□ 0.05
NECAP1-206ENST00000542095 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
NECAP1-206ENST00000542095 TSPY4P0CV99 314 aa15.38■□□□□ 0.05
NECAP1-206ENST00000542095 TSPY10P0CW01 314 aa15.38■□□□□ 0.05
NECAP1-206ENST00000542095 FOXD1Q16676 465 aa15.38■□□□□ 0.05
NECAP1-206ENST00000542095 UHRF1BP1LA0JNW5 1464 aa15.37■□□□□ 0.05
NECAP1-206ENST00000542095 CCDC141Q6ZP82 1450 aa15.36■□□□□ 0.05
NECAP1-206ENST00000542095 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
NECAP1-206ENST00000542095 ARHGAP5Q13017 1502 aa15.35■□□□□ 0.05
NECAP1-206ENST00000542095 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
NECAP1-206ENST00000542095 RSPH4AQ5TD94 716 aa15.35■□□□□ 0.05
NECAP1-206ENST00000542095 HNRNPMP52272 730 aaKnown RBP eCLIP15.34■□□□□ 0.05
NECAP1-206ENST00000542095 HIRIP3Q9BW71 556 aaPredicted RBP15.34■□□□□ 0.05
NECAP1-206ENST00000542095 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
NECAP1-206ENST00000542095 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
NECAP1-206ENST00000542095 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.04
NECAP1-206ENST00000542095 L3MBTL2Q969R5 705 aa15.33■□□□□ 0.04
NECAP1-206ENST00000542095 MAST1Q9Y2H9 1570 aa15.32■□□□□ 0.04
NECAP1-206ENST00000542095 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
NECAP1-206ENST00000542095 KIF15Q9NS87 1388 aa15.32■□□□□ 0.04
NECAP1-206ENST00000542095 PLEKHH2Q8IVE3 1493 aa15.31■□□□□ 0.04
NECAP1-206ENST00000542095 GTF3C3Q9Y5Q9 886 aa15.31■□□□□ 0.04
NECAP1-206ENST00000542095 NUP155O75694 1391 aa15.28■□□□□ 0.04
NECAP1-206ENST00000542095 PKD2Q13563 968 aa15.27■□□□□ 0.04
NECAP1-206ENST00000542095 PLXNC1O60486 1568 aa15.27■□□□□ 0.03
NECAP1-206ENST00000542095 EIF4G2P78344 907 aaKnown RBP eCLIP15.26■□□□□ 0.03
NECAP1-206ENST00000542095 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
NECAP1-206ENST00000542095 PLCH2O75038 1416 aa15.26■□□□□ 0.03
NECAP1-206ENST00000542095 HSPA5P11021 654 aaKnown RBP15.25■□□□□ 0.03
NECAP1-206ENST00000542095 ANP32CO43423 234 aa15.23■□□□□ 0.03
NECAP1-206ENST00000542095 UNC13BO14795 1591 aa15.23■□□□□ 0.03
NECAP1-206ENST00000542095 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
NECAP1-206ENST00000542095 ABCC1P33527 1531 aa15.22■□□□□ 0.03
NECAP1-206ENST00000542095 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
NECAP1-206ENST00000542095 NBPF8Q3BBV2 869 aa15.21■□□□□ 0.03
NECAP1-206ENST00000542095 FAM135AQ9P2D6 1515 aa15.21■□□□□ 0.03
NECAP1-206ENST00000542095 EFCAB2Q5VUJ9 269 aa15.21■□□□□ 0.03
NECAP1-206ENST00000542095 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
NECAP1-206ENST00000542095 DUOX2Q9NRD8 1548 aa15.19■□□□□ 0.02
NECAP1-206ENST00000542095 CCER2I3L3R5 266 aa15.19■□□□□ 0.02
NECAP1-206ENST00000542095 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
NECAP1-206ENST00000542095 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
NECAP1-206ENST00000542095 IQGAP3Q86VI3 1631 aa15.17■□□□□ 0.02
NECAP1-206ENST00000542095 ERBINQ96RT1 1412 aa15.16■□□□□ 0.02
NECAP1-206ENST00000542095 ABCA9Q8IUA7 1624 aa15.15■□□□□ 0.02
NECAP1-206ENST00000542095 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
NECAP1-206ENST00000542095 UHRF1BP1Q6BDS2 1440 aa15.14■□□□□ 0.02
NECAP1-206ENST00000542095 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
NECAP1-206ENST00000542095 TRAPPC8Q9Y2L5 1435 aa15.13■□□□□ 0.01
NECAP1-206ENST00000542095 CCDC7Q96M83 1385 aa15.12■□□□□ 0.01
NECAP1-206ENST00000542095 CNTLNQ9NXG0 1405 aa15.12■□□□□ 0.01
NECAP1-206ENST00000542095 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
NECAP1-206ENST00000542095 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
NECAP1-206ENST00000542095 RTEL1-TNFRSF6BF6WH68 1400 aa15.11■□□□□ 0.01
NECAP1-206ENST00000542095 KDM5CP41229 1560 aa15.1■□□□□ 0.01
NECAP1-206ENST00000542095 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
NECAP1-206ENST00000542095 ZFYVE16Q7Z3T8 1539 aa15.09■□□□□ 0.01
NECAP1-206ENST00000542095 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
NECAP1-206ENST00000542095 FANCAO15360 1455 aa15.09■□□□□ 0.01
NECAP1-206ENST00000542095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
NECAP1-206ENST00000542095 ASXL2Q76L83 1435 aa15.08■□□□□ 0.01
NECAP1-206ENST00000542095 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms