RNA–Protein interactions for RNA: ENST00000541240.5

KIFC3-206, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 3,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-206ENST00000541240 SUPT16HQ9Y5B9 1047 aaKnown RBP22.72■■□□□ 1.23
KIFC3-206ENST00000541240 ABCC5O15440 1437 aa22.72■■□□□ 1.23
KIFC3-206ENST00000541240 SYNJ2O15056 1496 aa22.71■■□□□ 1.23
KIFC3-206ENST00000541240 ANP32CO43423 234 aa22.71■■□□□ 1.23
KIFC3-206ENST00000541240 JPH4Q96JJ6 628 aa22.68■■□□□ 1.22
KIFC3-206ENST00000541240 ROCK1Q13464 1354 aa22.66■■□□□ 1.22
KIFC3-206ENST00000541240 L3MBTL2Q969R5 705 aa22.66■■□□□ 1.22
KIFC3-206ENST00000541240 CFDP1Q9UEE9 299 aaPredicted RBP22.65■■□□□ 1.22
KIFC3-206ENST00000541240 TROQ12816 1431 aaPredicted RBP22.65■■□□□ 1.22
KIFC3-206ENST00000541240 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.22
KIFC3-206ENST00000541240 ZNF777Q9ULD5 760 aaPredicted RBP22.64■■□□□ 1.21
KIFC3-206ENST00000541240 HSPA5P11021 654 aaKnown RBP22.63■■□□□ 1.21
KIFC3-206ENST00000541240 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
KIFC3-206ENST00000541240 SLC4A1APQ9BWU0 796 aaKnown RBP22.6■■□□□ 1.21
KIFC3-206ENST00000541240 NUP160Q12769 1436 aa22.6■■□□□ 1.21
KIFC3-206ENST00000541240 CARMIL2Q6F5E8 1435 aa22.6■■□□□ 1.21
KIFC3-206ENST00000541240 ANKRD30BQ9BXX2 1392 aa22.59■■□□□ 1.21
KIFC3-206ENST00000541240 GPATCH8Q9UKJ3 1502 aaKnown RBP22.58■■□□□ 1.21
KIFC3-206ENST00000541240 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
KIFC3-206ENST00000541240 CAMSAP2Q08AD1 1489 aa22.58■■□□□ 1.2
KIFC3-206ENST00000541240 KIF14Q15058 1648 aa22.57■■□□□ 1.2
KIFC3-206ENST00000541240 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
KIFC3-206ENST00000541240 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
KIFC3-206ENST00000541240 NCOA1Q15788 1441 aa22.53■■□□□ 1.2
KIFC3-206ENST00000541240 RPRD2Q5VT52 1461 aaKnown RBP22.52■■□□□ 1.2
KIFC3-206ENST00000541240 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
KIFC3-206ENST00000541240 C11orf95C9JLR9 678 aaPredicted RBP22.49■■□□□ 1.19
KIFC3-206ENST00000541240 PZPP20742 1482 aa22.47■■□□□ 1.19
KIFC3-206ENST00000541240 TEX14Q8IWB6 1497 aa22.47■■□□□ 1.19
KIFC3-206ENST00000541240 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
KIFC3-206ENST00000541240 ATP10BO94823 1461 aa22.46■■□□□ 1.19
KIFC3-206ENST00000541240 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.19
KIFC3-206ENST00000541240 ABCA8O94911 1581 aa22.44■■□□□ 1.18
KIFC3-206ENST00000541240 BCANQ96GW7 911 aa22.44■■□□□ 1.18
KIFC3-206ENST00000541240 FKBP8Q14318 412 aa22.43■■□□□ 1.18
KIFC3-206ENST00000541240 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
KIFC3-206ENST00000541240 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
KIFC3-206ENST00000541240 PKD2Q13563 968 aa22.41■■□□□ 1.18
KIFC3-206ENST00000541240 ABCC10Q5T3U5 1492 aa22.39■■□□□ 1.18
KIFC3-206ENST00000541240 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.17
KIFC3-206ENST00000541240 CCDC7Q96M83 1385 aa22.38■■□□□ 1.17
KIFC3-206ENST00000541240 ADGBQ8N7X0 1667 aa22.38■■□□□ 1.17
KIFC3-206ENST00000541240 PTPRGP23470 1445 aa22.36■■□□□ 1.17
KIFC3-206ENST00000541240 CNTLNQ9NXG0 1405 aa22.36■■□□□ 1.17
KIFC3-206ENST00000541240 KIAA1107Q9UPP5 1409 aa22.36■■□□□ 1.17
KIFC3-206ENST00000541240 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
KIFC3-206ENST00000541240 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.17
KIFC3-206ENST00000541240 CDC42BPAQ5VT25 1732 aa22.36■■□□□ 1.17
KIFC3-206ENST00000541240 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
KIFC3-206ENST00000541240 CCDC184Q52MB2 194 aa22.34■■□□□ 1.17
KIFC3-206ENST00000541240 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
KIFC3-206ENST00000541240 C9orf84Q5VXU9 1444 aa22.34■■□□□ 1.17
KIFC3-206ENST00000541240 SPATA31E1Q6ZUB1 1445 aa22.33■■□□□ 1.17
KIFC3-206ENST00000541240 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
KIFC3-206ENST00000541240 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
KIFC3-206ENST00000541240 NUP155O75694 1391 aa22.32■■□□□ 1.16
KIFC3-206ENST00000541240 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
KIFC3-206ENST00000541240 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
KIFC3-206ENST00000541240 NEFLP07196 543 aa22.28■■□□□ 1.16
KIFC3-206ENST00000541240 SHANK2Q9UPX8 1470 aa22.26■■□□□ 1.15
KIFC3-206ENST00000541240 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
KIFC3-206ENST00000541240 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
KIFC3-206ENST00000541240 TSHZ2Q9NRE2 1034 aa22.25■■□□□ 1.15
KIFC3-206ENST00000541240 USP47Q96K76 1375 aa22.21■■□□□ 1.15
KIFC3-206ENST00000541240 POLR3GLQ9BT43 218 aa22.21■■□□□ 1.15
KIFC3-206ENST00000541240 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.15
KIFC3-206ENST00000541240 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
KIFC3-206ENST00000541240 CNGB1Q14028 1251 aaPredicted RBP22.19■■□□□ 1.14
KIFC3-206ENST00000541240 CHD1O14646 1710 aa22.18■■□□□ 1.14
KIFC3-206ENST00000541240 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
KIFC3-206ENST00000541240 SAMD9LQ8IVG5 1584 aa22.17■■□□□ 1.14
KIFC3-206ENST00000541240 ARHGEF5Q12774 1597 aa22.15■■□□□ 1.14
KIFC3-206ENST00000541240 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
KIFC3-206ENST00000541240 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
KIFC3-206ENST00000541240 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
KIFC3-206ENST00000541240 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
KIFC3-206ENST00000541240 DCAF11Q8TEB1 546 aa22.12■■□□□ 1.13
KIFC3-206ENST00000541240 CARD11Q9BXL7 1154 aa22.12■■□□□ 1.13
KIFC3-206ENST00000541240 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
KIFC3-206ENST00000541240 PREX2Q70Z35 1606 aa22.12■■□□□ 1.13
KIFC3-206ENST00000541240 IRX6P78412 446 aaPredicted RBP22.11■■□□□ 1.13
KIFC3-206ENST00000541240 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
KIFC3-206ENST00000541240 SYCP2Q9BX26 1530 aa22.1■■□□□ 1.13
KIFC3-206ENST00000541240 TTC37Q6PGP7 1564 aa22.1■■□□□ 1.13
KIFC3-206ENST00000541240 RSPH4AQ5TD94 716 aa22.09■■□□□ 1.13
KIFC3-206ENST00000541240 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
KIFC3-206ENST00000541240 DHX29Q7Z478 1369 aaKnown RBP22.09■■□□□ 1.13
KIFC3-206ENST00000541240 ARHGAP5Q13017 1502 aa22.09■■□□□ 1.13
KIFC3-206ENST00000541240 KDM5CP41229 1560 aa22.09■■□□□ 1.13
KIFC3-206ENST00000541240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.132e-6■■■■■ 27.8
KIFC3-206ENST00000541240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.122e-6■■■■■ 51.7
KIFC3-206ENST00000541240 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
KIFC3-206ENST00000541240 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
KIFC3-206ENST00000541240 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
KIFC3-206ENST00000541240 ST20-MTHFSA0A0A6YYL1 179 aa22.05■■□□□ 1.12
KIFC3-206ENST00000541240 ARHGEF12Q9NZN5 1544 aa22.05■■□□□ 1.12
KIFC3-206ENST00000541240 ABCC2Q92887 1545 aa22.03■■□□□ 1.12
KIFC3-206ENST00000541240 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
KIFC3-206ENST00000541240 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
KIFC3-206ENST00000541240 ZBED9Q6R2W3 1325 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms