RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 PTPN23Q9H3S7 1636 aa10.21□□□□□ -0.78
KPNB1-203ENST00000540627 GRIN2BQ13224 1484 aa10.2□□□□□ -0.78
KPNB1-203ENST00000540627 THOC2Q8NI27 1593 aaKnown RBP10.2□□□□□ -0.78
KPNB1-203ENST00000540627 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
KPNB1-203ENST00000540627 NAIPQ13075 1403 aa10.19□□□□□ -0.78
KPNB1-203ENST00000540627 PDS5BQ9NTI5 1447 aa10.19□□□□□ -0.78
KPNB1-203ENST00000540627 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
KPNB1-203ENST00000540627 MYCNP04198 464 aaPredicted RBP10.19□□□□□ -0.78
KPNB1-203ENST00000540627 NEFLP07196 543 aa10.17□□□□□ -0.78
KPNB1-203ENST00000540627 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
KPNB1-203ENST00000540627 LRRIQ1Q96JM4 1722 aa10.17□□□□□ -0.78
KPNB1-203ENST00000540627 IFNLR1Q8IU57 520 aaPredicted RBP10.17□□□□□ -0.78
KPNB1-203ENST00000540627 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
KPNB1-203ENST00000540627 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
KPNB1-203ENST00000540627 UGGT2Q9NYU1 1516 aa10.15□□□□□ -0.78
KPNB1-203ENST00000540627 KIF21AQ7Z4S6 1674 aa10.15□□□□□ -0.78
KPNB1-203ENST00000540627 RRP7BPQ9NSQ0 103 aa10.14□□□□□ -0.79
KPNB1-203ENST00000540627 NPM2Q86SE8 214 aaKnown RBP10.14□□□□□ -0.79
KPNB1-203ENST00000540627 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
KPNB1-203ENST00000540627 CHIC2Q9UKJ5 165 aa10.13□□□□□ -0.79
KPNB1-203ENST00000540627 HECW1Q76N89 1606 aa10.12□□□□□ -0.79
KPNB1-203ENST00000540627 MAGI3Q5TCQ9 1506 aa10.12□□□□□ -0.79
KPNB1-203ENST00000540627 TCOF1Q13428 1488 aaKnown RBP10.11□□□□□ -0.79
KPNB1-203ENST00000540627 TARBP1Q13395 1621 aaKnown RBP10.1□□□□□ -0.79
KPNB1-203ENST00000540627 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
KPNB1-203ENST00000540627 EPRSP07814 1512 aaKnown RBP10.09□□□□□ -0.79
KPNB1-203ENST00000540627 KDM5BQ9UGL1 1544 aa10.09□□□□□ -0.79
KPNB1-203ENST00000540627 GCC2Q8IWJ2 1684 aa10.09□□□□□ -0.79
KPNB1-203ENST00000540627 IQGAP2Q13576 1575 aa10.09□□□□□ -0.79
KPNB1-203ENST00000540627 MIA2Q96PC5 1412 aa10.09□□□□□ -0.79
KPNB1-203ENST00000540627 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
KPNB1-203ENST00000540627 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
KPNB1-203ENST00000540627 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
KPNB1-203ENST00000540627 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.81e-16■□□□□ 10.7
KPNB1-203ENST00000540627 MPHOSPH9Q99550 1183 aa10.07□□□□□ -0.8
KPNB1-203ENST00000540627 PBRM1Q86U86 1689 aa10.07□□□□□ -0.8
KPNB1-203ENST00000540627 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
KPNB1-203ENST00000540627 CDK13Q14004 1512 aaKnown RBP10.06□□□□□ -0.8
KPNB1-203ENST00000540627 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
KPNB1-203ENST00000540627 WASHC2AQ641Q2 1341 aa10.06□□□□□ -0.8
KPNB1-203ENST00000540627 HNRNPUQ00839 825 aaKnown RBP eCLIP10.05□□□□□ -0.8
KPNB1-203ENST00000540627 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
KPNB1-203ENST00000540627 ADAMTS12P58397 1594 aa10.05□□□□□ -0.8
KPNB1-203ENST00000540627 DENND4BO75064 1496 aaPredicted RBP10.05□□□□□ -0.8
KPNB1-203ENST00000540627 WDR62O43379 1518 aa10.05□□□□□ -0.8
KPNB1-203ENST00000540627 KDM6BO15054 1643 aa10.04□□□□□ -0.8
KPNB1-203ENST00000540627 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
KPNB1-203ENST00000540627 ROCK1Q13464 1354 aa10.02□□□□□ -0.81
KPNB1-203ENST00000540627 ANP32EQ9BTT0 268 aa10.02□□□□□ -0.81
KPNB1-203ENST00000540627 CNTLNQ9NXG0 1405 aa10.01□□□□□ -0.81
KPNB1-203ENST00000540627 MRC2Q9UBG0 1479 aa10.01□□□□□ -0.81
KPNB1-203ENST00000540627 DAPK1P53355 1430 aa10.01□□□□□ -0.81
KPNB1-203ENST00000540627 CDK11AQ9UQ88 783 aaPredicted RBP10.01□□□□□ -0.81
KPNB1-203ENST00000540627 ERCC6Q03468 1493 aa10.01□□□□□ -0.81
KPNB1-203ENST00000540627 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
KPNB1-203ENST00000540627 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
KPNB1-203ENST00000540627 RBM19Q9Y4C8 960 aaKnown RBP9.99□□□□□ -0.81
KPNB1-203ENST00000540627 KIAA0586Q9BVV6 1533 aa9.99□□□□□ -0.81
KPNB1-203ENST00000540627 ABCC5O15440 1437 aa9.99□□□□□ -0.81
KPNB1-203ENST00000540627 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
KPNB1-203ENST00000540627 CCDC7Q96M83 1385 aa9.98□□□□□ -0.81
KPNB1-203ENST00000540627 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
KPNB1-203ENST00000540627 IFT140Q96RY7 1462 aa9.97□□□□□ -0.81
KPNB1-203ENST00000540627 ZNF644Q9H582 1327 aaPredicted RBP9.97□□□□□ -0.81
KPNB1-203ENST00000540627 KIAA0556O60303 1618 aa9.97□□□□□ -0.81
KPNB1-203ENST00000540627 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
KPNB1-203ENST00000540627 NUP153P49790 1475 aaKnown RBP9.97□□□□□ -0.81
KPNB1-203ENST00000540627 DISP1Q96F81 1524 aa9.96□□□□□ -0.81
KPNB1-203ENST00000540627 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.81
KPNB1-203ENST00000540627 NBPF8Q3BBV2 869 aa9.96□□□□□ -0.82
KPNB1-203ENST00000540627 TEX14Q8IWB6 1497 aa9.96□□□□□ -0.82
KPNB1-203ENST00000540627 ZNF608Q9ULD9 1512 aaPredicted RBP9.96□□□□□ -0.82
KPNB1-203ENST00000540627 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
KPNB1-203ENST00000540627 MRS2Q9HD23 443 aa9.96□□□□□ -0.82
KPNB1-203ENST00000540627 RAPGEF6Q8TEU7 1601 aa9.95□□□□□ -0.82
KPNB1-203ENST00000540627 IRX6P78412 446 aaPredicted RBP9.95□□□□□ -0.82
KPNB1-203ENST00000540627 ERICH6BQ5W0A0 696 aa9.95□□□□□ -0.82
KPNB1-203ENST00000540627 FAM9BQ8IZU0 186 aa9.95□□□□□ -0.82
KPNB1-203ENST00000540627 CCDC184Q52MB2 194 aa9.94□□□□□ -0.82
KPNB1-203ENST00000540627 CFDP1Q9UEE9 299 aaPredicted RBP9.94□□□□□ -0.82
KPNB1-203ENST00000540627 KIF7Q2M1P5 1343 aa9.93□□□□□ -0.82
KPNB1-203ENST00000540627 GRIN2AQ12879 1464 aa9.93□□□□□ -0.82
KPNB1-203ENST00000540627 TROQ12816 1431 aaPredicted RBP9.93□□□□□ -0.82
KPNB1-203ENST00000540627 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
KPNB1-203ENST00000540627 PRG4Q92954 1404 aaPredicted RBP9.92□□□□□ -0.82
KPNB1-203ENST00000540627 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
KPNB1-203ENST00000540627 CAMSAP2Q08AD1 1489 aa9.91□□□□□ -0.82
KPNB1-203ENST00000540627 PPP4R2Q9NY27 417 aa9.91□□□□□ -0.82
KPNB1-203ENST00000540627 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
KPNB1-203ENST00000540627 RGL2O15211 777 aa9.9□□□□□ -0.82
KPNB1-203ENST00000540627 PZPP20742 1482 aa9.9□□□□□ -0.82
KPNB1-203ENST00000540627 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.82
KPNB1-203ENST00000540627 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.83
KPNB1-203ENST00000540627 KIAA1107Q9UPP5 1409 aa9.89□□□□□ -0.83
KPNB1-203ENST00000540627 POLR1AO95602 1720 aaPredicted RBP9.89□□□□□ -0.83
KPNB1-203ENST00000540627 CHMP7Q8WUX9 453 aaPredicted RBP9.89□□□□□ -0.83
KPNB1-203ENST00000540627 ANKRD30AQ9BXX3 1397 aa9.89□□□□□ -0.83
KPNB1-203ENST00000540627 GPATCH8Q9UKJ3 1502 aaKnown RBP9.89□□□□□ -0.83
KPNB1-203ENST00000540627 ZNF326Q5BKZ1 582 aaKnown RBP9.88□□□□□ -0.83
KPNB1-203ENST00000540627 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms