RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
GPD2-213ENST00000540309 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
GPD2-213ENST00000540309 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
GPD2-213ENST00000540309 C11orf95C9JLR9 678 aaPredicted RBP13.94□□□□□ -0.18
GPD2-213ENST00000540309 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
GPD2-213ENST00000540309 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
GPD2-213ENST00000540309 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
GPD2-213ENST00000540309 ROCK2O75116 1388 aaKnown RBP13.92□□□□□ -0.18
GPD2-213ENST00000540309 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
GPD2-213ENST00000540309 TCERG1O14776 1098 aaKnown RBP13.91□□□□□ -0.18
GPD2-213ENST00000540309 MS4A1P11836 297 aa13.91□□□□□ -0.18
GPD2-213ENST00000540309 FAM9BQ8IZU0 186 aa13.91□□□□□ -0.18
GPD2-213ENST00000540309 DNAJC5Q9H3Z4 198 aa13.91□□□□□ -0.18
GPD2-213ENST00000540309 L3MBTL2Q969R5 705 aa13.9□□□□□ -0.18
GPD2-213ENST00000540309 MPHOSPH9Q99550 1183 aa13.9□□□□□ -0.18
GPD2-213ENST00000540309 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
GPD2-213ENST00000540309 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
GPD2-213ENST00000540309 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
GPD2-213ENST00000540309 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
GPD2-213ENST00000540309 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
GPD2-213ENST00000540309 FANCD2Q9BXW9 1451 aa13.88□□□□□ -0.19
GPD2-213ENST00000540309 WASHC2CQ9Y4E1 1318 aa13.88□□□□□ -0.19
GPD2-213ENST00000540309 P3H3Q8IVL6 736 aa13.87□□□□□ -0.19
GPD2-213ENST00000540309 NBR1Q14596 966 aa13.87□□□□□ -0.19
GPD2-213ENST00000540309 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
GPD2-213ENST00000540309 INSRP06213 1382 aa13.86□□□□□ -0.19
GPD2-213ENST00000540309 ZMYM4Q5VZL5 1548 aa13.86□□□□□ -0.19
GPD2-213ENST00000540309 MBD5Q9P267 1494 aa13.85□□□□□ -0.19
GPD2-213ENST00000540309 LRPPRCP42704 1394 aaKnown RBP13.85□□□□□ -0.19
GPD2-213ENST00000540309 KDM6BO15054 1643 aa13.84□□□□□ -0.19
GPD2-213ENST00000540309 DNMT1P26358 1616 aaKnown RBP13.83□□□□□ -0.2
GPD2-213ENST00000540309 PDE3BQ13370 1112 aa13.83□□□□□ -0.2
GPD2-213ENST00000540309 KIF14Q15058 1648 aa13.83□□□□□ -0.2
GPD2-213ENST00000540309 MAGI3Q5TCQ9 1506 aa13.82□□□□□ -0.2
GPD2-213ENST00000540309 BRD4O60885 1362 aaPredicted RBP13.82□□□□□ -0.2
GPD2-213ENST00000540309 PNISRQ8TF01 805 aaKnown RBP13.82□□□□□ -0.2
GPD2-213ENST00000540309 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
GPD2-213ENST00000540309 KDM5CP41229 1560 aa13.8□□□□□ -0.2
GPD2-213ENST00000540309 NESP48681 1621 aa13.8□□□□□ -0.2
GPD2-213ENST00000540309 NBPF8Q3BBV2 869 aa13.8□□□□□ -0.2
GPD2-213ENST00000540309 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
GPD2-213ENST00000540309 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
GPD2-213ENST00000540309 BACH2Q9BYV9 841 aa13.78□□□□□ -0.2
GPD2-213ENST00000540309 EPRSP07814 1512 aaKnown RBP13.78□□□□□ -0.2
GPD2-213ENST00000540309 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
GPD2-213ENST00000540309 KIF15Q9NS87 1388 aa13.77□□□□□ -0.2
GPD2-213ENST00000540309 BCORL1Q5H9F3 1711 aa13.77□□□□□ -0.2
GPD2-213ENST00000540309 DAPK1P53355 1430 aa13.77□□□□□ -0.21
GPD2-213ENST00000540309 RALBP1Q15311 655 aa13.77□□□□□ -0.21
GPD2-213ENST00000540309 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
GPD2-213ENST00000540309 RRP1P56182 461 aaKnown RBP13.76□□□□□ -0.21
GPD2-213ENST00000540309 PDE4AP27815 886 aa13.75□□□□□ -0.21
GPD2-213ENST00000540309 E9PCH4 1651 aa13.75□□□□□ -0.21
GPD2-213ENST00000540309 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
GPD2-213ENST00000540309 USP47Q96K76 1375 aa13.74□□□□□ -0.21
GPD2-213ENST00000540309 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
GPD2-213ENST00000540309 ANO8Q9HCE9 1232 aaPredicted RBP13.74□□□□□ -0.21
GPD2-213ENST00000540309 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
GPD2-213ENST00000540309 NEFMP07197 916 aa13.73□□□□□ -0.21
GPD2-213ENST00000540309 WDR62O43379 1518 aa13.73□□□□□ -0.21
GPD2-213ENST00000540309 LAMC3Q9Y6N6 1575 aa13.72□□□□□ -0.21
GPD2-213ENST00000540309 TMC1Q8TDI8 760 aa13.72□□□□□ -0.21
GPD2-213ENST00000540309 PLEKHH2Q8IVE3 1493 aa13.72□□□□□ -0.21
GPD2-213ENST00000540309 MYBBP1AQ9BQG0 1328 aaKnown RBP13.72□□□□□ -0.21
GPD2-213ENST00000540309 ABCC5O15440 1437 aa13.71□□□□□ -0.21
GPD2-213ENST00000540309 KIAA1107Q9UPP5 1409 aa13.71□□□□□ -0.21
GPD2-213ENST00000540309 ADGRL2O95490 1459 aa13.71□□□□□ -0.21
GPD2-213ENST00000540309 PZPP20742 1482 aa13.71□□□□□ -0.21
GPD2-213ENST00000540309 RCAN3Q9UKA8 241 aa13.69□□□□□ -0.22
GPD2-213ENST00000540309 IQGAP2Q13576 1575 aa13.69□□□□□ -0.22
GPD2-213ENST00000540309 GSE1Q14687 1217 aa13.69□□□□□ -0.22
GPD2-213ENST00000540309 SALL2Q9Y467 1007 aaPredicted RBP13.69□□□□□ -0.22
GPD2-213ENST00000540309 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
GPD2-213ENST00000540309 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
GPD2-213ENST00000540309 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
GPD2-213ENST00000540309 CHIC2Q9UKJ5 165 aa13.68□□□□□ -0.22
GPD2-213ENST00000540309 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
GPD2-213ENST00000540309 CROCC2H7BZ55 1655 aa13.65□□□□□ -0.22
GPD2-213ENST00000540309 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
GPD2-213ENST00000540309 NLRP13Q86W25 1043 aa13.64□□□□□ -0.23
GPD2-213ENST00000540309 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
GPD2-213ENST00000540309 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
GPD2-213ENST00000540309 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
GPD2-213ENST00000540309 BLMP54132 1417 aaPredicted RBP13.61□□□□□ -0.23
GPD2-213ENST00000540309 LAMC1P11047 1609 aa13.61□□□□□ -0.23
GPD2-213ENST00000540309 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
GPD2-213ENST00000540309 CDK13Q14004 1512 aaKnown RBP13.6□□□□□ -0.23
GPD2-213ENST00000540309 FOXD1Q16676 465 aa13.6□□□□□ -0.23
GPD2-213ENST00000540309 RSPH6AQ9H0K4 717 aa13.6□□□□□ -0.23
GPD2-213ENST00000540309 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
GPD2-213ENST00000540309 SHANK2Q9UPX8 1470 aa13.59□□□□□ -0.23
GPD2-213ENST00000540309 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
GPD2-213ENST00000540309 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
GPD2-213ENST00000540309 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
GPD2-213ENST00000540309 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
GPD2-213ENST00000540309 CEP170Q5SW79 1584 aa13.57□□□□□ -0.24
GPD2-213ENST00000540309 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
GPD2-213ENST00000540309 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
GPD2-213ENST00000540309 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
GPD2-213ENST00000540309 ADAMTS12P58397 1594 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms