RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.472e-7■■■□□ 14.7
DDB1-217ENST00000540166 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
DDB1-217ENST00000540166 HNRNPMP52272 730 aaKnown RBP eCLIP12.1□□□□□ -0.477e-7■■■■□ 23.1
DDB1-217ENST00000540166 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
DDB1-217ENST00000540166 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
DDB1-217ENST00000540166 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
DDB1-217ENST00000540166 ATP10BO94823 1461 aa12.09□□□□□ -0.47
DDB1-217ENST00000540166 KDM5BQ9UGL1 1544 aa12.08□□□□□ -0.48
DDB1-217ENST00000540166 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
DDB1-217ENST00000540166 AKNAQ7Z591 1439 aa12.07□□□□□ -0.48
DDB1-217ENST00000540166 CCDC18Q5T9S5 1454 aa12.06□□□□□ -0.48
DDB1-217ENST00000540166 DEKP35659 375 aaKnown RBP12.05□□□□□ -0.48
DDB1-217ENST00000540166 CHGAP10645 457 aaKnown RBP12.05□□□□□ -0.48
DDB1-217ENST00000540166 ARHGAP5Q13017 1502 aa12.04□□□□□ -0.48
DDB1-217ENST00000540166 FANCAO15360 1455 aa12.04□□□□□ -0.48
DDB1-217ENST00000540166 EFCAB5A4FU69 1503 aa12.04□□□□□ -0.48
DDB1-217ENST00000540166 DMRT2Q9Y5R5 561 aa12.04□□□□□ -0.48
DDB1-217ENST00000540166 KIF3BO15066 747 aa12.04□□□□□ -0.48
DDB1-217ENST00000540166 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
DDB1-217ENST00000540166 HSPA2P54652 639 aa12.03□□□□□ -0.48
DDB1-217ENST00000540166 NBR1Q14596 966 aa12.03□□□□□ -0.48
DDB1-217ENST00000540166 ADGRL1O94910 1474 aa12.02□□□□□ -0.48
DDB1-217ENST00000540166 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.48
DDB1-217ENST00000540166 DIP2BQ9P265 1576 aa12.02□□□□□ -0.49
DDB1-217ENST00000540166 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
DDB1-217ENST00000540166 CEBPAP49715 358 aaPredicted RBP12.01□□□□□ -0.49
DDB1-217ENST00000540166 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
DDB1-217ENST00000540166 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
DDB1-217ENST00000540166 RSPH4AQ5TD94 716 aa12□□□□□ -0.49
DDB1-217ENST00000540166 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
DDB1-217ENST00000540166 RAPGEF6Q8TEU7 1601 aa11.99□□□□□ -0.49
DDB1-217ENST00000540166 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
DDB1-217ENST00000540166 ZCCHC11Q5TAX3 1644 aaKnown RBP11.98□□□□□ -0.49
DDB1-217ENST00000540166 CDK13Q14004 1512 aaKnown RBP11.98□□□□□ -0.49
DDB1-217ENST00000540166 PPP1R15AO75807 674 aaPredicted RBP11.98□□□□□ -0.49
DDB1-217ENST00000540166 C14orf37Q86TY3 774 aa11.96□□□□□ -0.49
DDB1-217ENST00000540166 NEO1Q92859 1461 aa11.96□□□□□ -0.5
DDB1-217ENST00000540166 KIF21BO75037 1637 aa11.96□□□□□ -0.5
DDB1-217ENST00000540166 NUP153P49790 1475 aaKnown RBP11.95□□□□□ -0.5
DDB1-217ENST00000540166 ANP32CO43423 234 aa11.95□□□□□ -0.5
DDB1-217ENST00000540166 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
DDB1-217ENST00000540166 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
DDB1-217ENST00000540166 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
DDB1-217ENST00000540166 ARHGAP35Q9NRY4 1499 aa11.95□□□□□ -0.5
DDB1-217ENST00000540166 MAGI3Q5TCQ9 1506 aa11.94□□□□□ -0.5
DDB1-217ENST00000540166 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
DDB1-217ENST00000540166 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
DDB1-217ENST00000540166 PLCH2O75038 1416 aa11.93□□□□□ -0.5
DDB1-217ENST00000540166 ABCA8O94911 1581 aa11.93□□□□□ -0.5
DDB1-217ENST00000540166 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
DDB1-217ENST00000540166 RRP7BPQ9NSQ0 103 aa11.92□□□□□ -0.5
DDB1-217ENST00000540166 KANK1Q14678 1352 aa11.92□□□□□ -0.5
DDB1-217ENST00000540166 EID1Q9Y6B2 187 aa11.91□□□□□ -0.5
DDB1-217ENST00000540166 GLI2P10070 1586 aa11.9□□□□□ -0.5
DDB1-217ENST00000540166 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
DDB1-217ENST00000540166 RTN4Q9NQC3 1192 aaKnown RBP11.89□□□□□ -0.51
DDB1-217ENST00000540166 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
DDB1-217ENST00000540166 FANCIQ9NVI1 1328 aa11.88□□□□□ -0.51
DDB1-217ENST00000540166 ANP32AP39687 249 aaKnown RBP11.88□□□□□ -0.51
DDB1-217ENST00000540166 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
DDB1-217ENST00000540166 KIF14Q15058 1648 aa11.88□□□□□ -0.51
DDB1-217ENST00000540166 ZNF644Q9H582 1327 aaPredicted RBP11.88□□□□□ -0.51
DDB1-217ENST00000540166 PLEKHH2Q8IVE3 1493 aa11.87□□□□□ -0.51
DDB1-217ENST00000540166 ERICH6BQ5W0A0 696 aa11.87□□□□□ -0.51
DDB1-217ENST00000540166 ZNF518AQ6AHZ1 1483 aa11.86□□□□□ -0.51
DDB1-217ENST00000540166 CCDC136Q96JN2 1154 aa11.86□□□□□ -0.51
DDB1-217ENST00000540166 THEMISQ8N1K5 641 aaPredicted RBP11.86□□□□□ -0.51
DDB1-217ENST00000540166 HIRIP3Q9BW71 556 aaPredicted RBP11.86□□□□□ -0.51
DDB1-217ENST00000540166 COL17A1Q9UMD9 1497 aaPredicted RBP11.86□□□□□ -0.51
DDB1-217ENST00000540166 MSH5O43196 834 aa11.85□□□□□ -0.51
DDB1-217ENST00000540166 ATP10AO60312 1499 aa11.85□□□□□ -0.51
DDB1-217ENST00000540166 ZNF326Q5BKZ1 582 aaKnown RBP11.85□□□□□ -0.51
DDB1-217ENST00000540166 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
DDB1-217ENST00000540166 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
DDB1-217ENST00000540166 DHX57Q6P158 1386 aaKnown RBP11.84□□□□□ -0.51
DDB1-217ENST00000540166 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
DDB1-217ENST00000540166 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
DDB1-217ENST00000540166 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
DDB1-217ENST00000540166 PIP4K2BP78356 416 aa11.83□□□□□ -0.52
DDB1-217ENST00000540166 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
DDB1-217ENST00000540166 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.52
DDB1-217ENST00000540166 ZFYVE16Q7Z3T8 1539 aa11.83□□□□□ -0.52
DDB1-217ENST00000540166 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
DDB1-217ENST00000540166 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
DDB1-217ENST00000540166 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
DDB1-217ENST00000540166 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
DDB1-217ENST00000540166 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
DDB1-217ENST00000540166 YEATS2Q9ULM3 1422 aa11.81□□□□□ -0.52
DDB1-217ENST00000540166 ARAP3Q8WWN8 1544 aa11.81□□□□□ -0.52
DDB1-217ENST00000540166 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
DDB1-217ENST00000540166 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
DDB1-217ENST00000540166 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
DDB1-217ENST00000540166 SAMD9Q5K651 1589 aa11.8□□□□□ -0.52
DDB1-217ENST00000540166 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
DDB1-217ENST00000540166 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
DDB1-217ENST00000540166 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
DDB1-217ENST00000540166 ANKRD30AQ9BXX3 1397 aa11.78□□□□□ -0.52
DDB1-217ENST00000540166 PTPRMP28827 1452 aa11.77□□□□□ -0.53
DDB1-217ENST00000540166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.77□□□□□ -0.533e-6■■■■□ 20
DDB1-217ENST00000540166 CNTLNQ9NXG0 1405 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms