RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 MAPKBP1O60336 1514 aa8.35□□□□□ -1.07
PTPRD-214ENST00000540109 NUP153P49790 1475 aaKnown RBP8.34□□□□□ -1.07
PTPRD-214ENST00000540109 ANP32AP39687 249 aaKnown RBP8.33□□□□□ -1.08
PTPRD-214ENST00000540109 DNMT1P26358 1616 aaKnown RBP8.33□□□□□ -1.08
PTPRD-214ENST00000540109 ABCA8O94911 1581 aa8.32□□□□□ -1.08
PTPRD-214ENST00000540109 MAGI3Q5TCQ9 1506 aa8.32□□□□□ -1.08
PTPRD-214ENST00000540109 NPM2Q86SE8 214 aaKnown RBP8.32□□□□□ -1.08
PTPRD-214ENST00000540109 NAIPQ13075 1403 aa8.32□□□□□ -1.08
PTPRD-214ENST00000540109 KIF14Q15058 1648 aa8.31□□□□□ -1.08
PTPRD-214ENST00000540109 CDK13Q14004 1512 aaKnown RBP8.31□□□□□ -1.08
PTPRD-214ENST00000540109 ITGAEP38570 1179 aa8.31□□□□□ -1.08
PTPRD-214ENST00000540109 DEKP35659 375 aaKnown RBP8.31□□□□□ -1.08
PTPRD-214ENST00000540109 SHANK2Q9UPX8 1470 aa8.3□□□□□ -1.08
PTPRD-214ENST00000540109 ADGBQ8N7X0 1667 aa8.3□□□□□ -1.08
PTPRD-214ENST00000540109 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
PTPRD-214ENST00000540109 JPH4Q96JJ6 628 aa8.29□□□□□ -1.08
PTPRD-214ENST00000540109 ADGRL2O95490 1459 aa8.29□□□□□ -1.08
PTPRD-214ENST00000540109 DAPK1P53355 1430 aa8.29□□□□□ -1.08
PTPRD-214ENST00000540109 TONSLQ96HA7 1378 aa8.28□□□□□ -1.08
PTPRD-214ENST00000540109 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-214ENST00000540109 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
PTPRD-214ENST00000540109 PLEKHD1A6NEE1 506 aa8.26□□□□□ -1.09
PTPRD-214ENST00000540109 CROCC2H7BZ55 1655 aa8.26□□□□□ -1.09
PTPRD-214ENST00000540109 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
PTPRD-214ENST00000540109 ARHGEF5Q12774 1597 aa8.26□□□□□ -1.09
PTPRD-214ENST00000540109 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-214ENST00000540109 PTPRGP23470 1445 aa8.25□□□□□ -1.09
PTPRD-214ENST00000540109 CAMSAP2Q08AD1 1489 aa8.25□□□□□ -1.09
PTPRD-214ENST00000540109 PTPRKQ15262 1439 aa8.25□□□□□ -1.09
PTPRD-214ENST00000540109 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
PTPRD-214ENST00000540109 PRG4Q92954 1404 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-214ENST00000540109 ANKRD30AQ9BXX3 1397 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 PLEKHG5O94827 1062 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 CHD1O14646 1710 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 GPATCH8Q9UKJ3 1502 aaKnown RBP8.24□□□□□ -1.09
PTPRD-214ENST00000540109 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 ARXQ96QS3 562 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 POLR3GLQ9BT43 218 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 ABCC5O15440 1437 aa8.24□□□□□ -1.09
PTPRD-214ENST00000540109 PLB1Q6P1J6 1458 aa8.23□□□□□ -1.09
PTPRD-214ENST00000540109 FBLN2P98095 1184 aa8.23□□□□□ -1.09
PTPRD-214ENST00000540109 CFDP1Q9UEE9 299 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-214ENST00000540109 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
PTPRD-214ENST00000540109 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
PTPRD-214ENST00000540109 ZBTB47Q9UFB7 747 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-214ENST00000540109 ABCC2Q92887 1545 aa8.22□□□□□ -1.09
PTPRD-214ENST00000540109 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
PTPRD-214ENST00000540109 ATP10BO94823 1461 aa8.21□□□□□ -1.09
PTPRD-214ENST00000540109 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.1
PTPRD-214ENST00000540109 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.1
PTPRD-214ENST00000540109 MAST1Q9Y2H9 1570 aa8.21□□□□□ -1.1
PTPRD-214ENST00000540109 PREX2Q70Z35 1606 aa8.21□□□□□ -1.1
PTPRD-214ENST00000540109 ARAP3Q8WWN8 1544 aa8.2□□□□□ -1.1
PTPRD-214ENST00000540109 CDC42BPAQ5VT25 1732 aa8.19□□□□□ -1.1
PTPRD-214ENST00000540109 MIER1Q8N108 512 aa8.19□□□□□ -1.1
PTPRD-214ENST00000540109 NCOA1Q15788 1441 aa8.19□□□□□ -1.1
PTPRD-214ENST00000540109 NAP1L5Q96NT1 182 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-214ENST00000540109 KIAA1107Q9UPP5 1409 aa8.18□□□□□ -1.1
PTPRD-214ENST00000540109 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
PTPRD-214ENST00000540109 TRIM52Q96A61 297 aa8.18□□□□□ -1.1
PTPRD-214ENST00000540109 RPRD2Q5VT52 1461 aaKnown RBP8.17□□□□□ -1.1
PTPRD-214ENST00000540109 SUPT16HQ9Y5B9 1047 aaKnown RBP8.17□□□□□ -1.1
PTPRD-214ENST00000540109 ARID4BQ4LE39 1312 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-214ENST00000540109 TSPY4P0CV99 314 aa8.17□□□□□ -1.1
PTPRD-214ENST00000540109 TSPY10P0CW01 314 aa8.17□□□□□ -1.1
PTPRD-214ENST00000540109 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
PTPRD-214ENST00000540109 NEFMP07197 916 aa8.17□□□□□ -1.1
PTPRD-214ENST00000540109 MPHOSPH9Q99550 1183 aa8.17□□□□□ -1.1
PTPRD-214ENST00000540109 C9orf84Q5VXU9 1444 aa8.16□□□□□ -1.1
PTPRD-214ENST00000540109 RRP7BPQ9NSQ0 103 aa8.16□□□□□ -1.1
PTPRD-214ENST00000540109 PLXNC1O60486 1568 aa8.16□□□□□ -1.1
PTPRD-214ENST00000540109 MYO5CQ9NQX4 1742 aa8.16□□□□□ -1.1
PTPRD-214ENST00000540109 ANKRD50Q9ULJ7 1429 aa8.15□□□□□ -1.1
PTPRD-214ENST00000540109 ARHGEF12Q9NZN5 1544 aa8.15□□□□□ -1.1
PTPRD-214ENST00000540109 ANKRD30BQ9BXX2 1392 aa8.15□□□□□ -1.1
PTPRD-214ENST00000540109 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.11
PTPRD-214ENST00000540109 KDM5BQ9UGL1 1544 aa8.15□□□□□ -1.11
PTPRD-214ENST00000540109 CCER2I3L3R5 266 aa8.15□□□□□ -1.11
PTPRD-214ENST00000540109 SIN3AQ96ST3 1273 aa8.14□□□□□ -1.11
PTPRD-214ENST00000540109 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-214ENST00000540109 TEX14Q8IWB6 1497 aa8.13□□□□□ -1.11
PTPRD-214ENST00000540109 RBM19Q9Y4C8 960 aaKnown RBP8.13□□□□□ -1.11
PTPRD-214ENST00000540109 CHIC2Q9UKJ5 165 aa8.13□□□□□ -1.11
PTPRD-214ENST00000540109 PZPP20742 1482 aa8.12□□□□□ -1.11
PTPRD-214ENST00000540109 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
PTPRD-214ENST00000540109 ARHGAP5Q13017 1502 aa8.12□□□□□ -1.11
PTPRD-214ENST00000540109 WDR7Q9Y4E6 1490 aa8.12□□□□□ -1.11
PTPRD-214ENST00000540109 SAMD9LQ8IVG5 1584 aa8.12□□□□□ -1.11
PTPRD-214ENST00000540109 MBD5Q9P267 1494 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 UNC13BO14795 1591 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 ERBINQ96RT1 1412 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 KDM6BO15054 1643 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 DUOX2Q9NRD8 1548 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
PTPRD-214ENST00000540109 SALL2Q9Y467 1007 aaPredicted RBP8.11□□□□□ -1.11
PTPRD-214ENST00000540109 KIF15Q9NS87 1388 aa8.11□□□□□ -1.11
PTPRD-214ENST00000540109 TNNT2P45379 298 aaPredicted RBP8.1□□□□□ -1.11
PTPRD-214ENST00000540109 ZCCHC11Q5TAX3 1644 aaKnown RBP8.1□□□□□ -1.11
PTPRD-214ENST00000540109 CDC42BPBQ9Y5S2 1711 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms