RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
CACNB4-210ENST00000539935 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
CACNB4-210ENST00000539935 GBP4Q96PP9 640 aa16.19■□□□□ 0.18
CACNB4-210ENST00000539935 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
CACNB4-210ENST00000539935 SPRYD3Q8NCJ5 442 aa16.18■□□□□ 0.18
CACNB4-210ENST00000539935 HTATSF1O43719 755 aaKnown RBP16.17■□□□□ 0.18
CACNB4-210ENST00000539935 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
CACNB4-210ENST00000539935 DEKP35659 375 aaKnown RBP16.16■□□□□ 0.18
CACNB4-210ENST00000539935 ANO8Q9HCE9 1232 aaPredicted RBP16.16■□□□□ 0.18
CACNB4-210ENST00000539935 EEA1Q15075 1411 aa16.15■□□□□ 0.18
CACNB4-210ENST00000539935 TMF1P82094 1093 aa16.15■□□□□ 0.18
CACNB4-210ENST00000539935 RRP12Q5JTH9 1297 aaKnown RBP16.14■□□□□ 0.17
CACNB4-210ENST00000539935 TPM4P67936 248 aa16.14■□□□□ 0.17
CACNB4-210ENST00000539935 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
CACNB4-210ENST00000539935 CEP162Q5TB80 1403 aa16.13■□□□□ 0.17
CACNB4-210ENST00000539935 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
CACNB4-210ENST00000539935 IPO8O15397 1037 aaKnown RBP16.12■□□□□ 0.17
CACNB4-210ENST00000539935 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
CACNB4-210ENST00000539935 KANK1Q14678 1352 aa16.08■□□□□ 0.16
CACNB4-210ENST00000539935 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
CACNB4-210ENST00000539935 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
CACNB4-210ENST00000539935 SRPK2P78362 688 aaKnown RBP16.07■□□□□ 0.16
CACNB4-210ENST00000539935 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
CACNB4-210ENST00000539935 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
CACNB4-210ENST00000539935 CREBRFQ8IUR6 639 aa16.06■□□□□ 0.16
CACNB4-210ENST00000539935 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
CACNB4-210ENST00000539935 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
CACNB4-210ENST00000539935 APBB1O00213 710 aa16.05■□□□□ 0.16
CACNB4-210ENST00000539935 SOX12O15370 315 aa16.05■□□□□ 0.16
CACNB4-210ENST00000539935 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
CACNB4-210ENST00000539935 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
CACNB4-210ENST00000539935 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
CACNB4-210ENST00000539935 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
CACNB4-210ENST00000539935 TPM3P06753 285 aa16.03■□□□□ 0.16
CACNB4-210ENST00000539935 RWDD1Q9H446 243 aaPredicted RBP16.02■□□□□ 0.16
CACNB4-210ENST00000539935 KIF27Q86VH2 1401 aa16.02■□□□□ 0.15
CACNB4-210ENST00000539935 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.15
CACNB4-210ENST00000539935 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
CACNB4-210ENST00000539935 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
CACNB4-210ENST00000539935 RBM19Q9Y4C8 960 aaKnown RBP16■□□□□ 0.15
CACNB4-210ENST00000539935 PHF14O94880 888 aa16■□□□□ 0.15
CACNB4-210ENST00000539935 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
CACNB4-210ENST00000539935 SLKQ9H2G2 1235 aaPredicted RBP16■□□□□ 0.15
CACNB4-210ENST00000539935 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
CACNB4-210ENST00000539935 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
CACNB4-210ENST00000539935 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
CACNB4-210ENST00000539935 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
CACNB4-210ENST00000539935 HSP90B1P14625 803 aaKnown RBP15.98■□□□□ 0.15
CACNB4-210ENST00000539935 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
CACNB4-210ENST00000539935 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
CACNB4-210ENST00000539935 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
CACNB4-210ENST00000539935 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
CACNB4-210ENST00000539935 APPP05067 770 aa15.97■□□□□ 0.15
CACNB4-210ENST00000539935 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
CACNB4-210ENST00000539935 HDAC5Q9UQL6 1122 aa15.96■□□□□ 0.15
CACNB4-210ENST00000539935 TCERG1O14776 1098 aaKnown RBP15.96■□□□□ 0.15
CACNB4-210ENST00000539935 HDGFL2Q7Z4V5 671 aaPredicted RBP15.96■□□□□ 0.15
CACNB4-210ENST00000539935 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.14
CACNB4-210ENST00000539935 RCAN3Q9UKA8 241 aa15.95■□□□□ 0.14
CACNB4-210ENST00000539935 TRIM6-TRIM34B2RNG4 842 aa15.95■□□□□ 0.14
CACNB4-210ENST00000539935 FHAD1B1AJZ9 1412 aa15.94■□□□□ 0.14
CACNB4-210ENST00000539935 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
CACNB4-210ENST00000539935 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
CACNB4-210ENST00000539935 GPS2Q13227 327 aa15.93■□□□□ 0.14
CACNB4-210ENST00000539935 CCAR2Q8N163 923 aaKnown RBP15.93■□□□□ 0.14
CACNB4-210ENST00000539935 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
CACNB4-210ENST00000539935 HMMRO75330 724 aa15.93■□□□□ 0.14
CACNB4-210ENST00000539935 SAFB2Q14151 953 aaKnown RBP eCLIP15.92■□□□□ 0.14
CACNB4-210ENST00000539935 HSP90AA2PQ14568 343 aaPredicted RBP15.92■□□□□ 0.14
CACNB4-210ENST00000539935 CCDC70Q6NSX1 233 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 PES1O00541 588 aaKnown RBP15.92■□□□□ 0.14
CACNB4-210ENST00000539935 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 TIMELESSQ9UNS1 1208 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 ZNF771Q7L3S4 317 aaPredicted RBP15.92■□□□□ 0.14
CACNB4-210ENST00000539935 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
CACNB4-210ENST00000539935 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
CACNB4-210ENST00000539935 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
CACNB4-210ENST00000539935 TSR1Q2NL82 804 aaKnown RBP15.91■□□□□ 0.14
CACNB4-210ENST00000539935 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
CACNB4-210ENST00000539935 VPS53Q5VIR6 699 aa15.9■□□□□ 0.14
CACNB4-210ENST00000539935 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
CACNB4-210ENST00000539935 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
CACNB4-210ENST00000539935 KIF16BQ96L93 1317 aa15.89■□□□□ 0.13
CACNB4-210ENST00000539935 ST18O60284 1047 aa15.88■□□□□ 0.13
CACNB4-210ENST00000539935 RALBP1Q15311 655 aa15.88■□□□□ 0.13
CACNB4-210ENST00000539935 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
CACNB4-210ENST00000539935 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
CACNB4-210ENST00000539935 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
CACNB4-210ENST00000539935 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
CACNB4-210ENST00000539935 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
CACNB4-210ENST00000539935 STK26Q9P289 416 aa15.86■□□□□ 0.13
CACNB4-210ENST00000539935 TPD52L1Q16890 204 aaPredicted RBP15.85■□□□□ 0.13
CACNB4-210ENST00000539935 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.85■□□□□ 0.13
CACNB4-210ENST00000539935 ROCK2O75116 1388 aaKnown RBP15.85■□□□□ 0.13
CACNB4-210ENST00000539935 G3V3G9 751 aa15.85■□□□□ 0.13
CACNB4-210ENST00000539935 DCAF8Q5TAQ9 597 aa15.85■□□□□ 0.13
CACNB4-210ENST00000539935 MARCH6O60337 910 aa15.85■□□□□ 0.13
CACNB4-210ENST00000539935 IPO9Q96P70 1041 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms