RNA–Protein interactions for RNA: ENST00000539408.5

GABARAPL1-207, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-207ENST00000539408 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
GABARAPL1-207ENST00000539408 HSPA2P54652 639 aa20.39■□□□□ 0.85
GABARAPL1-207ENST00000539408 CERKQ8TCT0 537 aa20.38■□□□□ 0.85
GABARAPL1-207ENST00000539408 PLCH2O75038 1416 aa20.36■□□□□ 0.85
GABARAPL1-207ENST00000539408 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
GABARAPL1-207ENST00000539408 SCAPERQ9BY12 1400 aa20.35■□□□□ 0.85
GABARAPL1-207ENST00000539408 CDK11AQ9UQ88 783 aaPredicted RBP20.34■□□□□ 0.85
GABARAPL1-207ENST00000539408 DMRT2Q9Y5R5 561 aa20.34■□□□□ 0.85
GABARAPL1-207ENST00000539408 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
GABARAPL1-207ENST00000539408 ATP10AO60312 1499 aa20.32■□□□□ 0.84
GABARAPL1-207ENST00000539408 MLECQ14165 292 aa20.32■□□□□ 0.84
GABARAPL1-207ENST00000539408 TTC37Q6PGP7 1564 aa20.32■□□□□ 0.84
GABARAPL1-207ENST00000539408 HECW1Q76N89 1606 aa20.31■□□□□ 0.84
GABARAPL1-207ENST00000539408 C9orf84Q5VXU9 1444 aa20.28■□□□□ 0.84
GABARAPL1-207ENST00000539408 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.84
GABARAPL1-207ENST00000539408 FMN1Q68DA7 1419 aa20.27■□□□□ 0.83
GABARAPL1-207ENST00000539408 FER1L4A9Z1Z3 1794 aa20.26■□□□□ 0.83
GABARAPL1-207ENST00000539408 ZNF518AQ6AHZ1 1483 aa20.24■□□□□ 0.83
GABARAPL1-207ENST00000539408 CDK13Q14004 1512 aaKnown RBP20.23■□□□□ 0.83
GABARAPL1-207ENST00000539408 SIGLEC1Q9BZZ2 1709 aa20.23■□□□□ 0.83
GABARAPL1-207ENST00000539408 PREX1Q8TCU6 1659 aa20.22■□□□□ 0.83
GABARAPL1-207ENST00000539408 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
GABARAPL1-207ENST00000539408 UHRF1BP1Q6BDS2 1440 aa20.19■□□□□ 0.82
GABARAPL1-207ENST00000539408 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
GABARAPL1-207ENST00000539408 CLIP1P30622 1438 aa20.18■□□□□ 0.82
GABARAPL1-207ENST00000539408 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
GABARAPL1-207ENST00000539408 CEBPAP49715 358 aaPredicted RBP20.17■□□□□ 0.82
GABARAPL1-207ENST00000539408 AFAP1Q8N556 730 aa20.16■□□□□ 0.82
GABARAPL1-207ENST00000539408 ESF1Q9H501 851 aaKnown RBP20.16■□□□□ 0.82
GABARAPL1-207ENST00000539408 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
GABARAPL1-207ENST00000539408 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
GABARAPL1-207ENST00000539408 SETD1BQ9UPS6 1966 aaKnown RBP20.15■□□□□ 0.82
GABARAPL1-207ENST00000539408 KIF14Q15058 1648 aa20.14■□□□□ 0.81
GABARAPL1-207ENST00000539408 KDM5CP41229 1560 aa20.14■□□□□ 0.81
GABARAPL1-207ENST00000539408 REREQ9P2R6 1566 aa20.13■□□□□ 0.81
GABARAPL1-207ENST00000539408 ARHGAP5Q13017 1502 aa20.13■□□□□ 0.81
GABARAPL1-207ENST00000539408 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
GABARAPL1-207ENST00000539408 PTPRTO14522 1441 aa20.12■□□□□ 0.81
GABARAPL1-207ENST00000539408 DISP3Q9P2K9 1392 aa20.1■□□□□ 0.81
GABARAPL1-207ENST00000539408 AGLP35573 1532 aa20.09■□□□□ 0.81
GABARAPL1-207ENST00000539408 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
GABARAPL1-207ENST00000539408 TRAPPC8Q9Y2L5 1435 aa20.08■□□□□ 0.8
GABARAPL1-207ENST00000539408 STRCQ7RTU9 1775 aa20.08■□□□□ 0.8
GABARAPL1-207ENST00000539408 CNTLNQ9NXG0 1405 aa20.07■□□□□ 0.8
GABARAPL1-207ENST00000539408 SOCS7O14512 581 aa20.06■□□□□ 0.8
GABARAPL1-207ENST00000539408 DIP2CQ9Y2E4 1556 aa20.06■□□□□ 0.8
GABARAPL1-207ENST00000539408 IQSEC2Q5JU85 1478 aa20.04■□□□□ 0.8
GABARAPL1-207ENST00000539408 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
GABARAPL1-207ENST00000539408 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
GABARAPL1-207ENST00000539408 C3P01024 1663 aa20■□□□□ 0.79
GABARAPL1-207ENST00000539408 ILDR2Q71H61 639 aa19.99■□□□□ 0.79
GABARAPL1-207ENST00000539408 ABCA6Q8N139 1617 aa19.98■□□□□ 0.79
GABARAPL1-207ENST00000539408 ABCC1P33527 1531 aa19.98■□□□□ 0.79
GABARAPL1-207ENST00000539408 NPATQ14207 1427 aa19.98■□□□□ 0.79
GABARAPL1-207ENST00000539408 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
GABARAPL1-207ENST00000539408 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
GABARAPL1-207ENST00000539408 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
GABARAPL1-207ENST00000539408 PREX2Q70Z35 1606 aa19.96■□□□□ 0.79
GABARAPL1-207ENST00000539408 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
GABARAPL1-207ENST00000539408 LTBP4Q8N2S1 1624 aa19.94■□□□□ 0.78
GABARAPL1-207ENST00000539408 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
GABARAPL1-207ENST00000539408 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
GABARAPL1-207ENST00000539408 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
GABARAPL1-207ENST00000539408 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
GABARAPL1-207ENST00000539408 PKD2Q13563 968 aa19.91■□□□□ 0.78
GABARAPL1-207ENST00000539408 SPAG9O60271 1321 aaKnown RBP19.9■□□□□ 0.78
GABARAPL1-207ENST00000539408 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
GABARAPL1-207ENST00000539408 SPATA31D1Q6ZQQ2 1576 aa19.89■□□□□ 0.77
GABARAPL1-207ENST00000539408 LRRIQ1Q96JM4 1722 aa19.88■□□□□ 0.77
GABARAPL1-207ENST00000539408 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
GABARAPL1-207ENST00000539408 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
GABARAPL1-207ENST00000539408 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
GABARAPL1-207ENST00000539408 PLEKHH2Q8IVE3 1493 aa19.86■□□□□ 0.77
GABARAPL1-207ENST00000539408 KIAA1107Q9UPP5 1409 aa19.86■□□□□ 0.77
GABARAPL1-207ENST00000539408 PLA2R1Q13018 1463 aa19.86■□□□□ 0.77
GABARAPL1-207ENST00000539408 CDC42BPAQ5VT25 1732 aa19.84■□□□□ 0.77
GABARAPL1-207ENST00000539408 FYCO1Q9BQS8 1478 aa19.84■□□□□ 0.77
GABARAPL1-207ENST00000539408 HNRNPMP52272 730 aaKnown RBP eCLIP19.83■□□□□ 0.77
GABARAPL1-207ENST00000539408 GPATCH8Q9UKJ3 1502 aaKnown RBP19.82■□□□□ 0.76
GABARAPL1-207ENST00000539408 CFDP1Q9UEE9 299 aaPredicted RBP19.82■□□□□ 0.76
GABARAPL1-207ENST00000539408 NCKAP5LQ9HCH0 1330 aa19.81■□□□□ 0.76
GABARAPL1-207ENST00000539408 UBAP1LF5GYI3 381 aa19.81■□□□□ 0.76
GABARAPL1-207ENST00000539408 A2MP01023 1474 aa19.8■□□□□ 0.76
GABARAPL1-207ENST00000539408 ATP7AQ04656 1500 aa19.79■□□□□ 0.76
GABARAPL1-207ENST00000539408 SYCP2Q9BX26 1530 aa19.79■□□□□ 0.76
GABARAPL1-207ENST00000539408 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
GABARAPL1-207ENST00000539408 PTPRKQ15262 1439 aa19.78■□□□□ 0.76
GABARAPL1-207ENST00000539408 GGT6Q6P531 493 aa19.78■□□□□ 0.76
GABARAPL1-207ENST00000539408 TCOF1Q13428 1488 aaKnown RBP19.78■□□□□ 0.76
GABARAPL1-207ENST00000539408 CCNB3Q8WWL7 1395 aa19.77■□□□□ 0.76
GABARAPL1-207ENST00000539408 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
GABARAPL1-207ENST00000539408 ZNF142P52746 1687 aaPredicted RBP19.76■□□□□ 0.75
GABARAPL1-207ENST00000539408 CEP170BQ9Y4F5 1589 aaPredicted RBP19.75■□□□□ 0.75
GABARAPL1-207ENST00000539408 SUPT6HQ7KZ85 1726 aaKnown RBP19.75■□□□□ 0.75
GABARAPL1-207ENST00000539408 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
GABARAPL1-207ENST00000539408 MYO3AQ8NEV4 1616 aa19.73■□□□□ 0.75
GABARAPL1-207ENST00000539408 CLTCQ00610 1675 aaKnown RBP19.73■□□□□ 0.75
GABARAPL1-207ENST00000539408 RTEL1-TNFRSF6BF6WH68 1400 aa19.71■□□□□ 0.75
GABARAPL1-207ENST00000539408 SCAF1Q9H7N4 1312 aaKnown RBP19.71■□□□□ 0.75
GABARAPL1-207ENST00000539408 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms