RNA–Protein interactions for RNA: ENST00000539396.5

STRN4-204, Transcript of striatin 4, humanhuman

TSL 2 BASIC

Gene STRN4, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-204ENST00000539396 HIRIP3Q9BW71 556 aaPredicted RBP25.07■■□□□ 1.6
STRN4-204ENST00000539396 DENND4BO75064 1496 aaPredicted RBP25.07■■□□□ 1.6
STRN4-204ENST00000539396 ROCK1Q13464 1354 aa25.07■■□□□ 1.6
STRN4-204ENST00000539396 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
STRN4-204ENST00000539396 DNMT1P26358 1616 aaKnown RBP25.05■■□□□ 1.6
STRN4-204ENST00000539396 MYT1Q01538 1121 aa25.04■■□□□ 1.6
STRN4-204ENST00000539396 DDX10Q13206 875 aaKnown RBP25.04■■□□□ 1.6
STRN4-204ENST00000539396 GPATCH8Q9UKJ3 1502 aaKnown RBP25.03■■□□□ 1.6
STRN4-204ENST00000539396 KIF14Q15058 1648 aa25.02■■□□□ 1.6
STRN4-204ENST00000539396 ZNF777Q9ULD5 760 aaPredicted RBP25.01■■□□□ 1.59
STRN4-204ENST00000539396 ABCA8O94911 1581 aa25.01■■□□□ 1.59
STRN4-204ENST00000539396 PLEKHD1A6NEE1 506 aa25.01■■□□□ 1.59
STRN4-204ENST00000539396 CAMSAP2Q08AD1 1489 aa25■■□□□ 1.59
STRN4-204ENST00000539396 ATP10BO94823 1461 aa24.99■■□□□ 1.59
STRN4-204ENST00000539396 FOXD1Q16676 465 aa24.99■■□□□ 1.59
STRN4-204ENST00000539396 KDM5BQ9UGL1 1544 aa24.97■■□□□ 1.59
STRN4-204ENST00000539396 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
STRN4-204ENST00000539396 PTPRGP23470 1445 aa24.95■■□□□ 1.58
STRN4-204ENST00000539396 ITSN2Q9NZM3 1697 aa24.95■■□□□ 1.58
STRN4-204ENST00000539396 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
STRN4-204ENST00000539396 SLC4A1APQ9BWU0 796 aaKnown RBP24.89■■□□□ 1.57
STRN4-204ENST00000539396 KCNH8Q96L42 1107 aa24.88■■□□□ 1.57
STRN4-204ENST00000539396 ABCC10Q5T3U5 1492 aa24.88■■□□□ 1.57
STRN4-204ENST00000539396 ANKRD30BQ9BXX2 1392 aa24.87■■□□□ 1.57
STRN4-204ENST00000539396 CHD1O14646 1710 aa24.86■■□□□ 1.57
STRN4-204ENST00000539396 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
STRN4-204ENST00000539396 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
STRN4-204ENST00000539396 ANKRD30AQ9BXX3 1397 aa24.82■■□□□ 1.56
STRN4-204ENST00000539396 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
STRN4-204ENST00000539396 ADGBQ8N7X0 1667 aa24.79■■□□□ 1.56
STRN4-204ENST00000539396 PZPP20742 1482 aa24.78■■□□□ 1.56
STRN4-204ENST00000539396 RPRD2Q5VT52 1461 aaKnown RBP24.78■■□□□ 1.56
STRN4-204ENST00000539396 CROCC2H7BZ55 1655 aa24.78■■□□□ 1.56
STRN4-204ENST00000539396 HSPA5P11021 654 aaKnown RBP24.76■■□□□ 1.55
STRN4-204ENST00000539396 HNRNPMP52272 730 aaKnown RBP eCLIP24.74■■□□□ 1.552e-6■■■□□ 16.6
STRN4-204ENST00000539396 ANP32CO43423 234 aa24.74■■□□□ 1.55
STRN4-204ENST00000539396 C9orf84Q5VXU9 1444 aa24.74■■□□□ 1.55
STRN4-204ENST00000539396 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
STRN4-204ENST00000539396 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
STRN4-204ENST00000539396 TSPY4P0CV99 314 aa24.73■■□□□ 1.55
STRN4-204ENST00000539396 TSPY10P0CW01 314 aa24.73■■□□□ 1.55
STRN4-204ENST00000539396 EIF4G2P78344 907 aaKnown RBP eCLIP24.71■■□□□ 1.55
STRN4-204ENST00000539396 ERCC6L2Q5T890 1561 aa24.7■■□□□ 1.55
STRN4-204ENST00000539396 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.54
STRN4-204ENST00000539396 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
STRN4-204ENST00000539396 TEX14Q8IWB6 1497 aa24.69■■□□□ 1.54
STRN4-204ENST00000539396 PKD2Q13563 968 aa24.69■■□□□ 1.54
STRN4-204ENST00000539396 KIAA1107Q9UPP5 1409 aa24.67■■□□□ 1.54
STRN4-204ENST00000539396 CCER2I3L3R5 266 aa24.66■■□□□ 1.54
STRN4-204ENST00000539396 WASHC2AQ641Q2 1341 aa24.65■■□□□ 1.54
STRN4-204ENST00000539396 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
STRN4-204ENST00000539396 NUP155O75694 1391 aa24.64■■□□□ 1.53
STRN4-204ENST00000539396 KIF15Q9NS87 1388 aa24.63■■□□□ 1.53
STRN4-204ENST00000539396 ARHGEF5Q12774 1597 aa24.61■■□□□ 1.53
STRN4-204ENST00000539396 ABCC2Q92887 1545 aa24.61■■□□□ 1.53
STRN4-204ENST00000539396 SAMD9LQ8IVG5 1584 aa24.61■■□□□ 1.53
STRN4-204ENST00000539396 CDC42BPBQ9Y5S2 1711 aa24.6■■□□□ 1.53
STRN4-204ENST00000539396 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
STRN4-204ENST00000539396 CCDC141Q6ZP82 1450 aa24.58■■□□□ 1.53
STRN4-204ENST00000539396 RSPH4AQ5TD94 716 aa24.57■■□□□ 1.52
STRN4-204ENST00000539396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.56■■□□□ 1.529e-7■■■□□ 19.1
STRN4-204ENST00000539396 TTC37Q6PGP7 1564 aa24.56■■□□□ 1.52
STRN4-204ENST00000539396 C11orf95C9JLR9 678 aaPredicted RBP24.56■■□□□ 1.52
STRN4-204ENST00000539396 ARHGAP5Q13017 1502 aa24.54■■□□□ 1.52
STRN4-204ENST00000539396 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
STRN4-204ENST00000539396 SYCP2Q9BX26 1530 aa24.51■■□□□ 1.51
STRN4-204ENST00000539396 ZNF326Q5BKZ1 582 aaKnown RBP24.5■■□□□ 1.51
STRN4-204ENST00000539396 KDM5DQ9BY66 1539 aa24.5■■□□□ 1.51
STRN4-204ENST00000539396 CCDC7Q96M83 1385 aa24.5■■□□□ 1.51
STRN4-204ENST00000539396 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
STRN4-204ENST00000539396 CNTLNQ9NXG0 1405 aa24.45■■□□□ 1.5
STRN4-204ENST00000539396 SUPT16HQ9Y5B9 1047 aaKnown RBP24.45■■□□□ 1.5
STRN4-204ENST00000539396 UHRF1BP1LA0JNW5 1464 aa24.44■■□□□ 1.5
STRN4-204ENST00000539396 ZCCHC11Q5TAX3 1644 aaKnown RBP24.42■■□□□ 1.5
STRN4-204ENST00000539396 KIF7Q2M1P5 1343 aa24.42■■□□□ 1.5
STRN4-204ENST00000539396 MYO5CQ9NQX4 1742 aa24.42■■□□□ 1.5
STRN4-204ENST00000539396 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
STRN4-204ENST00000539396 PLCH2O75038 1416 aa24.4■■□□□ 1.5
STRN4-204ENST00000539396 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
STRN4-204ENST00000539396 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.5
STRN4-204ENST00000539396 ARHGEF12Q9NZN5 1544 aa24.39■■□□□ 1.49
STRN4-204ENST00000539396 EFCAB2Q5VUJ9 269 aa24.38■■□□□ 1.49
STRN4-204ENST00000539396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.38■■□□□ 1.492e-7■□□□□ 10.8
STRN4-204ENST00000539396 USP47Q96K76 1375 aa24.37■■□□□ 1.49
STRN4-204ENST00000539396 KDM2AQ9Y2K7 1162 aa24.37■■□□□ 1.49
STRN4-204ENST00000539396 UHRF1BP1Q6BDS2 1440 aa24.36■■□□□ 1.49
STRN4-204ENST00000539396 DCAF11Q8TEB1 546 aa24.33■■□□□ 1.49
STRN4-204ENST00000539396 PRKRIP1Q9H875 184 aaPredicted RBP24.31■■□□□ 1.48
STRN4-204ENST00000539396 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
STRN4-204ENST00000539396 RALGAPBQ86X10 1494 aa24.3■■□□□ 1.48
STRN4-204ENST00000539396 CARD11Q9BXL7 1154 aa24.3■■□□□ 1.48
STRN4-204ENST00000539396 CCDC184Q52MB2 194 aa24.29■■□□□ 1.48
STRN4-204ENST00000539396 TRAPPC8Q9Y2L5 1435 aa24.28■■□□□ 1.48
STRN4-204ENST00000539396 UNC13BO14795 1591 aa24.28■■□□□ 1.48
STRN4-204ENST00000539396 DUOX2Q9NRD8 1548 aa24.27■■□□□ 1.48
STRN4-204ENST00000539396 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.48
STRN4-204ENST00000539396 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
STRN4-204ENST00000539396 KDM5CP41229 1560 aa24.26■■□□□ 1.47
STRN4-204ENST00000539396 HNRNPUQ00839 825 aaKnown RBP eCLIP24.26■■□□□ 1.47
STRN4-204ENST00000539396 ABCC1P33527 1531 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms