RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 MS4A1P11836 297 aa8.93□□□□□ -0.98
SCAPER-203ENST00000538941 PDE3BQ13370 1112 aa8.92□□□□□ -0.98
SCAPER-203ENST00000538941 RRP1P56182 461 aaKnown RBP8.92□□□□□ -0.98
SCAPER-203ENST00000538941 GSE1Q14687 1217 aa8.92□□□□□ -0.98
SCAPER-203ENST00000538941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
SCAPER-203ENST00000538941 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
SCAPER-203ENST00000538941 L1TD1Q5T7N2 865 aaKnown RBP8.92□□□□□ -0.98
SCAPER-203ENST00000538941 RGS3P49796 1198 aa8.91□□□□□ -0.98
SCAPER-203ENST00000538941 KTN1Q86UP2 1357 aaKnown RBP8.91□□□□□ -0.98
SCAPER-203ENST00000538941 CASKIN1Q8WXD9 1431 aa8.91□□□□□ -0.98
SCAPER-203ENST00000538941 TSPY4P0CV99 314 aa8.91□□□□□ -0.98
SCAPER-203ENST00000538941 TSPY10P0CW01 314 aa8.91□□□□□ -0.98
SCAPER-203ENST00000538941 HFM1A2PYH4 1435 aa8.9□□□□□ -0.98
SCAPER-203ENST00000538941 MYOM3Q5VTT5 1437 aa8.9□□□□□ -0.98
SCAPER-203ENST00000538941 KIF15Q9NS87 1388 aa8.9□□□□□ -0.98
SCAPER-203ENST00000538941 SMG6Q86US8 1419 aaKnown RBP8.9□□□□□ -0.98
SCAPER-203ENST00000538941 ANO8Q9HCE9 1232 aaPredicted RBP8.9□□□□□ -0.99
SCAPER-203ENST00000538941 KIF7Q2M1P5 1343 aa8.9□□□□□ -0.99
SCAPER-203ENST00000538941 EXOC6Q8TAG9 804 aa8.89□□□□□ -0.99
SCAPER-203ENST00000538941 CFDP1Q9UEE9 299 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-203ENST00000538941 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
SCAPER-203ENST00000538941 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
SCAPER-203ENST00000538941 HSP90AA1P07900 732 aaKnown RBP8.88□□□□□ -0.99
SCAPER-203ENST00000538941 AKNAQ7Z591 1439 aa8.88□□□□□ -0.99
SCAPER-203ENST00000538941 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
SCAPER-203ENST00000538941 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
SCAPER-203ENST00000538941 TRIM44Q96DX7 344 aaPredicted RBP8.87□□□□□ -0.99
SCAPER-203ENST00000538941 CC2D1BQ5T0F9 858 aaKnown RBP8.87□□□□□ -0.99
SCAPER-203ENST00000538941 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
SCAPER-203ENST00000538941 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
SCAPER-203ENST00000538941 LAMC3Q9Y6N6 1575 aa8.87□□□□□ -0.99
SCAPER-203ENST00000538941 PKNOX2Q96KN3 472 aa8.87□□□□□ -0.99
SCAPER-203ENST00000538941 EFCAB5A4FU69 1503 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 USP47Q96K76 1375 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 CCDC184Q52MB2 194 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 KNSTRNQ9Y448 316 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 ARID4BQ4LE39 1312 aaPredicted RBP8.86□□□□□ -0.99
SCAPER-203ENST00000538941 FGD5Q6ZNL6 1462 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 NCOA2Q15596 1464 aa8.86□□□□□ -0.99
SCAPER-203ENST00000538941 PKD2Q13563 968 aa8.85□□□□□ -0.99
SCAPER-203ENST00000538941 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
SCAPER-203ENST00000538941 PCF11O94913 1555 aaKnown RBP8.85□□□□□ -0.99
SCAPER-203ENST00000538941 CENPQQ7L2Z9 268 aaPredicted RBP8.84□□□□□ -0.99
SCAPER-203ENST00000538941 FAM161AQ3B820 660 aa8.84□□□□□ -0.99
SCAPER-203ENST00000538941 CDCA8Q53HL2 280 aa8.84□□□□□ -0.99
SCAPER-203ENST00000538941 FBLN2P98095 1184 aa8.83□□□□□ -1
SCAPER-203ENST00000538941 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
SCAPER-203ENST00000538941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.83□□□□□ -12e-6■■■□□ 17
SCAPER-203ENST00000538941 TMF1P82094 1093 aa8.83□□□□□ -1
SCAPER-203ENST00000538941 RGL3Q3MIN7 710 aa8.83□□□□□ -1
SCAPER-203ENST00000538941 NFKBIBQ15653 356 aa8.82□□□□□ -1
SCAPER-203ENST00000538941 NAIPQ13075 1403 aa8.82□□□□□ -1
SCAPER-203ENST00000538941 CFTRP13569 1480 aa8.82□□□□□ -1
SCAPER-203ENST00000538941 CRBNQ96SW2 442 aa8.82□□□□□ -1
SCAPER-203ENST00000538941 SLC4A3P48751 1232 aa8.81□□□□□ -1
SCAPER-203ENST00000538941 BACH2Q9BYV9 841 aa8.81□□□□□ -1
SCAPER-203ENST00000538941 BRD4O60885 1362 aaPredicted RBP8.81□□□□□ -1
SCAPER-203ENST00000538941 EHBP1L1Q8N3D4 1523 aa8.81□□□□□ -1
SCAPER-203ENST00000538941 PNNQ9H307 717 aaKnown RBP8.8□□□□□ -1
SCAPER-203ENST00000538941 PLIN1O60240 522 aa8.8□□□□□ -1
SCAPER-203ENST00000538941 AQRO60306 1485 aaKnown RBP eCLIP8.8□□□□□ -1
SCAPER-203ENST00000538941 NCOA1Q15788 1441 aa8.8□□□□□ -1
SCAPER-203ENST00000538941 ANKRD30AQ9BXX3 1397 aa8.8□□□□□ -1
SCAPER-203ENST00000538941 DNAJC5BQ9UF47 199 aa8.8□□□□□ -1
SCAPER-203ENST00000538941 PTPN23Q9H3S7 1636 aa8.8□□□□□ -1
SCAPER-203ENST00000538941 PLEKHD1A6NEE1 506 aa8.79□□□□□ -1
SCAPER-203ENST00000538941 GOLGA6L22H0YM25 854 aa8.79□□□□□ -1
SCAPER-203ENST00000538941 BRPF3Q9ULD4 1205 aa8.79□□□□□ -1
SCAPER-203ENST00000538941 FRAT1Q92837 279 aaPredicted RBP8.79□□□□□ -1
SCAPER-203ENST00000538941 SLKQ9H2G2 1235 aaPredicted RBP8.79□□□□□ -1
SCAPER-203ENST00000538941 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
SCAPER-203ENST00000538941 GOLGA6L3A6NEY3 463 aa8.79□□□□□ -1
SCAPER-203ENST00000538941 SUPT6HQ7KZ85 1726 aaKnown RBP8.78□□□□□ -1
SCAPER-203ENST00000538941 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
SCAPER-203ENST00000538941 GOLGA2Q08379 1002 aa8.78□□□□□ -1
SCAPER-203ENST00000538941 NUP155O75694 1391 aa8.78□□□□□ -1
SCAPER-203ENST00000538941 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
SCAPER-203ENST00000538941 NBPF8Q3BBV2 869 aa8.77□□□□□ -1.01
SCAPER-203ENST00000538941 TDRD9Q8NDG6 1382 aaKnown RBP8.77□□□□□ -1.01
SCAPER-203ENST00000538941 HSCBQ8IWL3 235 aa8.76□□□□□ -1.01
SCAPER-203ENST00000538941 MIA2Q96PC5 1412 aa8.76□□□□□ -1.01
SCAPER-203ENST00000538941 CFAP43Q8NDM7 1665 aa8.76□□□□□ -1.01
SCAPER-203ENST00000538941 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
SCAPER-203ENST00000538941 FTSJ3Q8IY81 847 aaKnown RBP8.75□□□□□ -1.01
SCAPER-203ENST00000538941 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
SCAPER-203ENST00000538941 MAPK8IP3Q9UPT6 1336 aa8.74□□□□□ -1.01
SCAPER-203ENST00000538941 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
SCAPER-203ENST00000538941 RAD54L2Q9Y4B4 1467 aa8.74□□□□□ -1.01
SCAPER-203ENST00000538941 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
SCAPER-203ENST00000538941 GZF1Q9H116 711 aaPredicted RBP8.73□□□□□ -1.01
SCAPER-203ENST00000538941 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
SCAPER-203ENST00000538941 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
SCAPER-203ENST00000538941 PTMSP20962 102 aa8.73□□□□□ -1.01
SCAPER-203ENST00000538941 HSP90AA2PQ14568 343 aaPredicted RBP8.72□□□□□ -1.01
SCAPER-203ENST00000538941 CFAP53Q96M91 514 aa8.72□□□□□ -1.01
SCAPER-203ENST00000538941 UBE2Q2Q8WVN8 375 aa8.72□□□□□ -1.01
SCAPER-203ENST00000538941 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
SCAPER-203ENST00000538941 EIF3AQ14152 1382 aaKnown RBP8.72□□□□□ -1.01
SCAPER-203ENST00000538941 RWDD1Q9H446 243 aaPredicted RBP8.71□□□□□ -1.01
SCAPER-203ENST00000538941 FRAT2O75474 233 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms