RNA–Protein interactions for RNA: ENST00000538494.1

SP140-212, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 629 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-212ENST00000538494 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
SP140-212ENST00000538494 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
SP140-212ENST00000538494 FAM212AQ96EL1 285 aa10.76□□□□□ -0.69
SP140-212ENST00000538494 WDR97A6NE52 1622 aa10.74□□□□□ -0.69
SP140-212ENST00000538494 PLCG2P16885 1265 aa10.74□□□□□ -0.69
SP140-212ENST00000538494 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
SP140-212ENST00000538494 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
SP140-212ENST00000538494 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
SP140-212ENST00000538494 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
SP140-212ENST00000538494 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
SP140-212ENST00000538494 TDRD9Q8NDG6 1382 aaKnown RBP10.72□□□□□ -0.69
SP140-212ENST00000538494 ST18O60284 1047 aa10.71□□□□□ -0.69
SP140-212ENST00000538494 SYNJ2O15056 1496 aa10.7□□□□□ -0.7
SP140-212ENST00000538494 FBXO41Q8TF61 875 aa10.69□□□□□ -0.7
SP140-212ENST00000538494 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
SP140-212ENST00000538494 DCAF8Q5TAQ9 597 aa10.68□□□□□ -0.7
SP140-212ENST00000538494 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
SP140-212ENST00000538494 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
SP140-212ENST00000538494 SOGA1O94964 1423 aa10.67□□□□□ -0.7
SP140-212ENST00000538494 GRIN2BQ13224 1484 aa10.66□□□□□ -0.7
SP140-212ENST00000538494 ABCC10Q5T3U5 1492 aa10.66□□□□□ -0.7
SP140-212ENST00000538494 PYGBP11216 843 aa10.65□□□□□ -0.7
SP140-212ENST00000538494 FKBP8Q14318 412 aa10.64□□□□□ -0.71
SP140-212ENST00000538494 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
SP140-212ENST00000538494 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
SP140-212ENST00000538494 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
SP140-212ENST00000538494 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
SP140-212ENST00000538494 FAM69CQ0P6D2 419 aa10.6□□□□□ -0.71
SP140-212ENST00000538494 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
SP140-212ENST00000538494 KDM6BO15054 1643 aa10.58□□□□□ -0.72
SP140-212ENST00000538494 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.58□□□□□ -0.72
SP140-212ENST00000538494 SHROOM2Q13796 1616 aa10.58□□□□□ -0.72
SP140-212ENST00000538494 MAPKBP1O60336 1514 aa10.58□□□□□ -0.72
SP140-212ENST00000538494 NUP160Q12769 1436 aa10.57□□□□□ -0.72
SP140-212ENST00000538494 SNPHO15079 494 aa10.56□□□□□ -0.72
SP140-212ENST00000538494 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
SP140-212ENST00000538494 ADGRL1O94910 1474 aa10.55□□□□□ -0.72
SP140-212ENST00000538494 SOCS7O14512 581 aa10.54□□□□□ -0.72
SP140-212ENST00000538494 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
SP140-212ENST00000538494 FGD5Q6ZNL6 1462 aa10.54□□□□□ -0.72
SP140-212ENST00000538494 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
SP140-212ENST00000538494 LMTK3Q96Q04 1460 aa10.53□□□□□ -0.72
SP140-212ENST00000538494 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
SP140-212ENST00000538494 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
SP140-212ENST00000538494 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
SP140-212ENST00000538494 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
SP140-212ENST00000538494 FBXO3Q9UK99 471 aa10.49□□□□□ -0.73
SP140-212ENST00000538494 PBRM1Q86U86 1689 aa10.49□□□□□ -0.73
SP140-212ENST00000538494 KLHL34Q8N239 644 aa10.48□□□□□ -0.73
SP140-212ENST00000538494 MKRN3Q13064 507 aaKnown RBP10.47□□□□□ -0.73
SP140-212ENST00000538494 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.73
SP140-212ENST00000538494 ILDR2Q71H61 639 aa10.46□□□□□ -0.73
SP140-212ENST00000538494 PDCD7Q8N8D1 485 aaKnown RBP10.46□□□□□ -0.73
SP140-212ENST00000538494 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
SP140-212ENST00000538494 CUX1P39880 1505 aa10.45□□□□□ -0.74
SP140-212ENST00000538494 ABCA10Q8WWZ4 1543 aa10.45□□□□□ -0.74
SP140-212ENST00000538494 GSE1Q14687 1217 aa10.45□□□□□ -0.74
SP140-212ENST00000538494 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
SP140-212ENST00000538494 PRG4Q92954 1404 aaPredicted RBP10.44□□□□□ -0.74
SP140-212ENST00000538494 L3MBTL3Q96JM7 780 aaPredicted RBP10.44□□□□□ -0.74
SP140-212ENST00000538494 JPH4Q96JJ6 628 aa10.43□□□□□ -0.74
SP140-212ENST00000538494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.74
SP140-212ENST00000538494 TSPOAP1O95153 1857 aa10.42□□□□□ -0.74
SP140-212ENST00000538494 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
SP140-212ENST00000538494 ADCY10Q96PN6 1610 aa10.41□□□□□ -0.74
SP140-212ENST00000538494 EMP3P54852 163 aa10.41□□□□□ -0.74
SP140-212ENST00000538494 PSEN1P49768 467 aa10.4□□□□□ -0.74
SP140-212ENST00000538494 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
SP140-212ENST00000538494 PPRC1Q5VV67 1664 aaKnown RBP10.39□□□□□ -0.75
SP140-212ENST00000538494 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
SP140-212ENST00000538494 GLI2P10070 1586 aa10.37□□□□□ -0.75
SP140-212ENST00000538494 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
SP140-212ENST00000538494 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
SP140-212ENST00000538494 FAM205CA6NFA0 338 aa10.36□□□□□ -0.75
SP140-212ENST00000538494 TOP2BQ02880 1626 aa10.35□□□□□ -0.75
SP140-212ENST00000538494 POTEB3A0JP26 581 aa10.34□□□□□ -0.75
SP140-212ENST00000538494 POTEBQ6S5H4 581 aa10.34□□□□□ -0.75
SP140-212ENST00000538494 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
SP140-212ENST00000538494 DPY19L2Q6NUT2 758 aa10.33□□□□□ -0.76
SP140-212ENST00000538494 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
SP140-212ENST00000538494 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
SP140-212ENST00000538494 DISP3Q9P2K9 1392 aa10.3□□□□□ -0.76
SP140-212ENST00000538494 PDAP1Q13442 181 aaKnown RBP10.3□□□□□ -0.76
SP140-212ENST00000538494 PLB1Q6P1J6 1458 aa10.3□□□□□ -0.76
SP140-212ENST00000538494 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
SP140-212ENST00000538494 CABP2Q9NPB3 220 aa10.29□□□□□ -0.76
SP140-212ENST00000538494 G3V3G9 751 aa10.28□□□□□ -0.76
SP140-212ENST00000538494 ASXL2Q76L83 1435 aa10.26□□□□□ -0.77
SP140-212ENST00000538494 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
SP140-212ENST00000538494 RUSC2Q8N2Y8 1516 aa10.26□□□□□ -0.77
SP140-212ENST00000538494 ABCC2Q92887 1545 aa10.25□□□□□ -0.77
SP140-212ENST00000538494 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
SP140-212ENST00000538494 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
SP140-212ENST00000538494 MAP3K4Q9Y6R4 1608 aa10.25□□□□□ -0.77
SP140-212ENST00000538494 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
SP140-212ENST00000538494 TEX14Q8IWB6 1497 aa10.24□□□□□ -0.77
SP140-212ENST00000538494 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
SP140-212ENST00000538494 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
SP140-212ENST00000538494 PTPRMP28827 1452 aa10.22□□□□□ -0.77
SP140-212ENST00000538494 EPRSP07814 1512 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms