RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
SLC28A1-204ENST00000538177 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
SLC28A1-204ENST00000538177 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
SLC28A1-204ENST00000538177 CFDP1Q9UEE9 299 aaPredicted RBP16.35■□□□□ 0.21
SLC28A1-204ENST00000538177 ITSN2Q9NZM3 1697 aa16.34■□□□□ 0.21
SLC28A1-204ENST00000538177 ATP10BO94823 1461 aa16.34■□□□□ 0.21
SLC28A1-204ENST00000538177 KIF14Q15058 1648 aa16.33■□□□□ 0.21
SLC28A1-204ENST00000538177 PLEKHD1A6NEE1 506 aa16.33■□□□□ 0.2
SLC28A1-204ENST00000538177 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
SLC28A1-204ENST00000538177 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
SLC28A1-204ENST00000538177 PTPRGP23470 1445 aa16.31■□□□□ 0.2
SLC28A1-204ENST00000538177 KDM5BQ9UGL1 1544 aa16.31■□□□□ 0.2
SLC28A1-204ENST00000538177 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
SLC28A1-204ENST00000538177 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
SLC28A1-204ENST00000538177 CHD1O14646 1710 aa16.28■□□□□ 0.2
SLC28A1-204ENST00000538177 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
SLC28A1-204ENST00000538177 ADGRL2O95490 1459 aa16.27■□□□□ 0.2
SLC28A1-204ENST00000538177 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
SLC28A1-204ENST00000538177 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
SLC28A1-204ENST00000538177 ANKRD30BQ9BXX2 1392 aa16.24■□□□□ 0.19
SLC28A1-204ENST00000538177 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
SLC28A1-204ENST00000538177 ADGBQ8N7X0 1667 aa16.23■□□□□ 0.19
SLC28A1-204ENST00000538177 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
SLC28A1-204ENST00000538177 CROCC2H7BZ55 1655 aa16.23■□□□□ 0.19
SLC28A1-204ENST00000538177 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
SLC28A1-204ENST00000538177 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
SLC28A1-204ENST00000538177 SHANK2Q9UPX8 1470 aa16.2■□□□□ 0.18
SLC28A1-204ENST00000538177 FOXD1Q16676 465 aa16.2■□□□□ 0.18
SLC28A1-204ENST00000538177 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
SLC28A1-204ENST00000538177 PZPP20742 1482 aa16.19■□□□□ 0.18
SLC28A1-204ENST00000538177 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
SLC28A1-204ENST00000538177 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
SLC28A1-204ENST00000538177 C9orf84Q5VXU9 1444 aa16.15■□□□□ 0.18
SLC28A1-204ENST00000538177 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
SLC28A1-204ENST00000538177 ARHGEF5Q12774 1597 aa16.14■□□□□ 0.17
SLC28A1-204ENST00000538177 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 MBD5Q9P267 1494 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 ABCC2Q92887 1545 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
SLC28A1-204ENST00000538177 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
SLC28A1-204ENST00000538177 CLASP1Q7Z460 1538 aa16.11■□□□□ 0.17
SLC28A1-204ENST00000538177 PREX2Q70Z35 1606 aa16.11■□□□□ 0.17
SLC28A1-204ENST00000538177 RSPH4AQ5TD94 716 aa16.11■□□□□ 0.17
SLC28A1-204ENST00000538177 HSPA5P11021 654 aaKnown RBP16.1■□□□□ 0.17
SLC28A1-204ENST00000538177 HNRNPMP52272 730 aaKnown RBP eCLIP16.1■□□□□ 0.17
SLC28A1-204ENST00000538177 CDC42BPBQ9Y5S2 1711 aa16.1■□□□□ 0.17
SLC28A1-204ENST00000538177 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
SLC28A1-204ENST00000538177 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
SLC28A1-204ENST00000538177 SAMD9LQ8IVG5 1584 aa16.09■□□□□ 0.17
SLC28A1-204ENST00000538177 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
SLC28A1-204ENST00000538177 ANP32CO43423 234 aa16.08■□□□□ 0.16
SLC28A1-204ENST00000538177 PKD2Q13563 968 aa16.08■□□□□ 0.16
SLC28A1-204ENST00000538177 CCDC141Q6ZP82 1450 aa16.08■□□□□ 0.16
SLC28A1-204ENST00000538177 NBPF8Q3BBV2 869 aa16.07■□□□□ 0.16
SLC28A1-204ENST00000538177 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
SLC28A1-204ENST00000538177 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
SLC28A1-204ENST00000538177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
SLC28A1-204ENST00000538177 UHRF1BP1LA0JNW5 1464 aa16.06■□□□□ 0.16
SLC28A1-204ENST00000538177 NUP155O75694 1391 aa16.05■□□□□ 0.16
SLC28A1-204ENST00000538177 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
SLC28A1-204ENST00000538177 WASHC2AQ641Q2 1341 aa16.04■□□□□ 0.16
SLC28A1-204ENST00000538177 ARHGAP5Q13017 1502 aa16.02■□□□□ 0.16
SLC28A1-204ENST00000538177 MAST1Q9Y2H9 1570 aa16.02■□□□□ 0.16
SLC28A1-204ENST00000538177 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.15
SLC28A1-204ENST00000538177 SPATA31E1Q6ZUB1 1445 aa16.01■□□□□ 0.15
SLC28A1-204ENST00000538177 SYCP2Q9BX26 1530 aa16■□□□□ 0.15
SLC28A1-204ENST00000538177 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
SLC28A1-204ENST00000538177 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
SLC28A1-204ENST00000538177 PLCH2O75038 1416 aa15.98■□□□□ 0.15
SLC28A1-204ENST00000538177 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
SLC28A1-204ENST00000538177 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.14
SLC28A1-204ENST00000538177 UHRF1BP1Q6BDS2 1440 aa15.95■□□□□ 0.14
SLC28A1-204ENST00000538177 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
SLC28A1-204ENST00000538177 PLXNC1O60486 1568 aa15.94■□□□□ 0.14
SLC28A1-204ENST00000538177 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
SLC28A1-204ENST00000538177 ARHGEF12Q9NZN5 1544 aa15.94■□□□□ 0.14
SLC28A1-204ENST00000538177 FAM135AQ9P2D6 1515 aa15.93■□□□□ 0.14
SLC28A1-204ENST00000538177 UNC13BO14795 1591 aa15.92■□□□□ 0.14
SLC28A1-204ENST00000538177 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
SLC28A1-204ENST00000538177 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SLC28A1-204ENST00000538177 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
SLC28A1-204ENST00000538177 ABCC1P33527 1531 aa15.88■□□□□ 0.13
SLC28A1-204ENST00000538177 RALGAPBQ86X10 1494 aa15.88■□□□□ 0.13
SLC28A1-204ENST00000538177 POLR1AO95602 1720 aaPredicted RBP15.88■□□□□ 0.13
SLC28A1-204ENST00000538177 USP47Q96K76 1375 aa15.88■□□□□ 0.13
SLC28A1-204ENST00000538177 ERBINQ96RT1 1412 aa15.87■□□□□ 0.13
SLC28A1-204ENST00000538177 PELP1Q8IZL8 1130 aaKnown RBP15.87■□□□□ 0.13
SLC28A1-204ENST00000538177 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
SLC28A1-204ENST00000538177 TRAPPC8Q9Y2L5 1435 aa15.86■□□□□ 0.13
SLC28A1-204ENST00000538177 MAGI2Q86UL8 1455 aa15.86■□□□□ 0.13
SLC28A1-204ENST00000538177 IQGAP3Q86VI3 1631 aa15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 KDM5CP41229 1560 aa15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 PLA2R1Q13018 1463 aa15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 ARID4BQ4LE39 1312 aaPredicted RBP15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 WDR7Q9Y4E6 1490 aa15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 SUPT16HQ9Y5B9 1047 aaKnown RBP15.85■□□□□ 0.13
SLC28A1-204ENST00000538177 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.13
SLC28A1-204ENST00000538177 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms