RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
CIT-209ENST00000538073 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
CIT-209ENST00000538073 TRHP20396 242 aaPredicted RBP12.56□□□□□ -0.4
CIT-209ENST00000538073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIT-209ENST00000538073 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
CIT-209ENST00000538073 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
CIT-209ENST00000538073 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
CIT-209ENST00000538073 MAP3K4Q9Y6R4 1608 aa12.54□□□□□ -0.4
CIT-209ENST00000538073 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
CIT-209ENST00000538073 FAM69CQ0P6D2 419 aa12.52□□□□□ -0.41
CIT-209ENST00000538073 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
CIT-209ENST00000538073 MYO5CQ9NQX4 1742 aa12.5□□□□□ -0.41
CIT-209ENST00000538073 PPRC1Q5VV67 1664 aaKnown RBP12.49□□□□□ -0.41
CIT-209ENST00000538073 ARAP3Q8WWN8 1544 aa12.49□□□□□ -0.41
CIT-209ENST00000538073 CD109Q6YHK3 1445 aa12.49□□□□□ -0.41
CIT-209ENST00000538073 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
CIT-209ENST00000538073 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
CIT-209ENST00000538073 GPATCH8Q9UKJ3 1502 aaKnown RBP12.48□□□□□ -0.41
CIT-209ENST00000538073 PLCH2O75038 1416 aa12.48□□□□□ -0.41
CIT-209ENST00000538073 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
CIT-209ENST00000538073 CCNB3Q8WWL7 1395 aa12.47□□□□□ -0.41
CIT-209ENST00000538073 PHLDB1Q86UU1 1377 aa12.46□□□□□ -0.41
CIT-209ENST00000538073 MYOM3Q5VTT5 1437 aa12.45□□□□□ -0.42
CIT-209ENST00000538073 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
CIT-209ENST00000538073 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
CIT-209ENST00000538073 TEX14Q8IWB6 1497 aa12.43□□□□□ -0.42
CIT-209ENST00000538073 NEO1Q92859 1461 aa12.43□□□□□ -0.42
CIT-209ENST00000538073 MIA2Q96PC5 1412 aa12.43□□□□□ -0.42
CIT-209ENST00000538073 CFAP74Q9C0B2 1584 aa12.43□□□□□ -0.42
CIT-209ENST00000538073 ARHGAP5Q13017 1502 aa12.42□□□□□ -0.42
CIT-209ENST00000538073 FANCAO15360 1455 aa12.42□□□□□ -0.42
CIT-209ENST00000538073 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
CIT-209ENST00000538073 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
CIT-209ENST00000538073 FGD6Q6ZV73 1430 aa12.4□□□□□ -0.42
CIT-209ENST00000538073 EFCAB2Q5VUJ9 269 aa12.4□□□□□ -0.42
CIT-209ENST00000538073 CFDP1Q9UEE9 299 aaPredicted RBP12.4□□□□□ -0.42
CIT-209ENST00000538073 AKNAQ7Z591 1439 aa12.39□□□□□ -0.43
CIT-209ENST00000538073 CAPN15O75808 1086 aa12.39□□□□□ -0.43
CIT-209ENST00000538073 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
CIT-209ENST00000538073 PTPN23Q9H3S7 1636 aa12.38□□□□□ -0.43
CIT-209ENST00000538073 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
CIT-209ENST00000538073 ABCC1P33527 1531 aa12.37□□□□□ -0.43
CIT-209ENST00000538073 CAMSAP2Q08AD1 1489 aa12.37□□□□□ -0.43
CIT-209ENST00000538073 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
CIT-209ENST00000538073 ADGRL1O94910 1474 aa12.36□□□□□ -0.43
CIT-209ENST00000538073 PLEKHH2Q8IVE3 1493 aa12.36□□□□□ -0.43
CIT-209ENST00000538073 POTEHQ6S545 545 aa12.36□□□□□ -0.43
CIT-209ENST00000538073 SPINK5Q9NQ38 1064 aaPredicted RBP12.36□□□□□ -0.43
CIT-209ENST00000538073 ZNF644Q9H582 1327 aaPredicted RBP12.36□□□□□ -0.43
CIT-209ENST00000538073 ARHGEF12Q9NZN5 1544 aa12.35□□□□□ -0.43
CIT-209ENST00000538073 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
CIT-209ENST00000538073 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
CIT-209ENST00000538073 SYCP2Q9BX26 1530 aa12.34□□□□□ -0.43
CIT-209ENST00000538073 DSG3P32926 999 aa12.34□□□□□ -0.43
CIT-209ENST00000538073 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
CIT-209ENST00000538073 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
CIT-209ENST00000538073 ARHGEF5Q12774 1597 aa12.34□□□□□ -0.43
CIT-209ENST00000538073 COL17A1Q9UMD9 1497 aaPredicted RBP12.34□□□□□ -0.43
CIT-209ENST00000538073 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
CIT-209ENST00000538073 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
CIT-209ENST00000538073 FRMPD1Q5SYB0 1578 aa12.31□□□□□ -0.44
CIT-209ENST00000538073 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
CIT-209ENST00000538073 DNMT1P26358 1616 aaKnown RBP12.31□□□□□ -0.44
CIT-209ENST00000538073 KDM5CP41229 1560 aa12.3□□□□□ -0.44
CIT-209ENST00000538073 KDM6BO15054 1643 aa12.3□□□□□ -0.44
CIT-209ENST00000538073 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
CIT-209ENST00000538073 ZNF518AQ6AHZ1 1483 aa12.3□□□□□ -0.44
CIT-209ENST00000538073 HNRNPMP52272 730 aaKnown RBP eCLIP12.3□□□□□ -0.44
CIT-209ENST00000538073 CROCC2H7BZ55 1655 aa12.29□□□□□ -0.44
CIT-209ENST00000538073 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
CIT-209ENST00000538073 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
CIT-209ENST00000538073 ZMYM4Q5VZL5 1548 aa12.28□□□□□ -0.44
CIT-209ENST00000538073 FAM50AQ14320 339 aaKnown RBP12.28□□□□□ -0.44
CIT-209ENST00000538073 ABCC5O15440 1437 aa12.28□□□□□ -0.44
CIT-209ENST00000538073 DAPK1P53355 1430 aa12.28□□□□□ -0.44
CIT-209ENST00000538073 MAST1Q9Y2H9 1570 aa12.27□□□□□ -0.44
CIT-209ENST00000538073 RAPGEF3O95398 923 aa12.27□□□□□ -0.45
CIT-209ENST00000538073 AFAP1Q8N556 730 aa12.27□□□□□ -0.45
CIT-209ENST00000538073 SHANK2Q9UPX8 1470 aa12.27□□□□□ -0.45
CIT-209ENST00000538073 MLH3Q9UHC1 1453 aa12.26□□□□□ -0.45
CIT-209ENST00000538073 HECW2Q9P2P5 1572 aa12.26□□□□□ -0.45
CIT-209ENST00000538073 INO80Q9ULG1 1556 aaPredicted RBP12.26□□□□□ -0.45
CIT-209ENST00000538073 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
CIT-209ENST00000538073 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
CIT-209ENST00000538073 PTPRKQ15262 1439 aa12.24□□□□□ -0.45
CIT-209ENST00000538073 MAGI2Q86UL8 1455 aa12.24□□□□□ -0.45
CIT-209ENST00000538073 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
CIT-209ENST00000538073 ATP7AQ04656 1500 aa12.23□□□□□ -0.45
CIT-209ENST00000538073 C9orf84Q5VXU9 1444 aa12.23□□□□□ -0.45
CIT-209ENST00000538073 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
CIT-209ENST00000538073 SPAG9O60271 1321 aaKnown RBP12.22□□□□□ -0.45
CIT-209ENST00000538073 TSPY4P0CV99 314 aa12.22□□□□□ -0.45
CIT-209ENST00000538073 TSPY10P0CW01 314 aa12.22□□□□□ -0.45
CIT-209ENST00000538073 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
CIT-209ENST00000538073 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
CIT-209ENST00000538073 ABCA6Q8N139 1617 aa12.21□□□□□ -0.46
CIT-209ENST00000538073 DIP2CQ9Y2E4 1556 aa12.2□□□□□ -0.46
CIT-209ENST00000538073 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
CIT-209ENST00000538073 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
CIT-209ENST00000538073 YEATS2Q9ULM3 1422 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms