RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 MLECQ14165 292 aa17.02■□□□□ 0.32
VPS37C-204ENST00000538036 HECW1Q76N89 1606 aa17.02■□□□□ 0.31
VPS37C-204ENST00000538036 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
VPS37C-204ENST00000538036 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
VPS37C-204ENST00000538036 CDK13Q14004 1512 aaKnown RBP17.01■□□□□ 0.31
VPS37C-204ENST00000538036 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
VPS37C-204ENST00000538036 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
VPS37C-204ENST00000538036 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
VPS37C-204ENST00000538036 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
VPS37C-204ENST00000538036 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
VPS37C-204ENST00000538036 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.3
VPS37C-204ENST00000538036 ZNF518AQ6AHZ1 1483 aa16.95■□□□□ 0.3
VPS37C-204ENST00000538036 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
VPS37C-204ENST00000538036 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
VPS37C-204ENST00000538036 CLIP1P30622 1438 aa16.92■□□□□ 0.3
VPS37C-204ENST00000538036 TROQ12816 1431 aaPredicted RBP16.92■□□□□ 0.3
VPS37C-204ENST00000538036 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
VPS37C-204ENST00000538036 MYO5CQ9NQX4 1742 aa16.9■□□□□ 0.3
VPS37C-204ENST00000538036 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
VPS37C-204ENST00000538036 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
VPS37C-204ENST00000538036 KIF14Q15058 1648 aa16.88■□□□□ 0.29
VPS37C-204ENST00000538036 ARHGAP5Q13017 1502 aa16.88■□□□□ 0.29
VPS37C-204ENST00000538036 KDM5CP41229 1560 aa16.88■□□□□ 0.29
VPS37C-204ENST00000538036 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
VPS37C-204ENST00000538036 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
VPS37C-204ENST00000538036 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
VPS37C-204ENST00000538036 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
VPS37C-204ENST00000538036 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
VPS37C-204ENST00000538036 SETD1BQ9UPS6 1966 aaKnown RBP16.85■□□□□ 0.29
VPS37C-204ENST00000538036 EHMT2Q96KQ7 1210 aa16.84■□□□□ 0.29
VPS37C-204ENST00000538036 AGLP35573 1532 aa16.82■□□□□ 0.28
VPS37C-204ENST00000538036 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
VPS37C-204ENST00000538036 PTPRTO14522 1441 aa16.81■□□□□ 0.28
VPS37C-204ENST00000538036 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
VPS37C-204ENST00000538036 CCDC18Q5T9S5 1454 aa16.79■□□□□ 0.28
VPS37C-204ENST00000538036 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
VPS37C-204ENST00000538036 STRCQ7RTU9 1775 aa16.78■□□□□ 0.28
VPS37C-204ENST00000538036 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
VPS37C-204ENST00000538036 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
VPS37C-204ENST00000538036 ABCC1P33527 1531 aa16.75■□□□□ 0.27
VPS37C-204ENST00000538036 ABCA6Q8N139 1617 aa16.75■□□□□ 0.27
VPS37C-204ENST00000538036 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
VPS37C-204ENST00000538036 DISP3Q9P2K9 1392 aa16.74■□□□□ 0.27
VPS37C-204ENST00000538036 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
VPS37C-204ENST00000538036 C3P01024 1663 aa16.72■□□□□ 0.27
VPS37C-204ENST00000538036 NPATQ14207 1427 aa16.72■□□□□ 0.27
VPS37C-204ENST00000538036 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
VPS37C-204ENST00000538036 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
VPS37C-204ENST00000538036 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
VPS37C-204ENST00000538036 SPAG9O60271 1321 aaKnown RBP16.7■□□□□ 0.26
VPS37C-204ENST00000538036 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
VPS37C-204ENST00000538036 ZMYM3Q14202 1370 aa16.69■□□□□ 0.26
VPS37C-204ENST00000538036 SOCS7O14512 581 aa16.69■□□□□ 0.26
VPS37C-204ENST00000538036 ZNF777Q9ULD5 760 aaPredicted RBP16.69■□□□□ 0.26
VPS37C-204ENST00000538036 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
VPS37C-204ENST00000538036 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
VPS37C-204ENST00000538036 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
VPS37C-204ENST00000538036 ILDR2Q71H61 639 aa16.67■□□□□ 0.26
VPS37C-204ENST00000538036 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
VPS37C-204ENST00000538036 SAMD9LQ8IVG5 1584 aa16.66■□□□□ 0.26
VPS37C-204ENST00000538036 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
VPS37C-204ENST00000538036 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
VPS37C-204ENST00000538036 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
VPS37C-204ENST00000538036 HNRNPMP52272 730 aaKnown RBP eCLIP16.65■□□□□ 0.264e-7■■■■□ 24.4
VPS37C-204ENST00000538036 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
VPS37C-204ENST00000538036 PKD2Q13563 968 aa16.64■□□□□ 0.25
VPS37C-204ENST00000538036 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
VPS37C-204ENST00000538036 CDC42BPAQ5VT25 1732 aa16.64■□□□□ 0.25
VPS37C-204ENST00000538036 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
VPS37C-204ENST00000538036 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
VPS37C-204ENST00000538036 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
VPS37C-204ENST00000538036 A2MP01023 1474 aa16.61■□□□□ 0.25
VPS37C-204ENST00000538036 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
VPS37C-204ENST00000538036 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
VPS37C-204ENST00000538036 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
VPS37C-204ENST00000538036 GGT6Q6P531 493 aa16.59■□□□□ 0.25
VPS37C-204ENST00000538036 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
VPS37C-204ENST00000538036 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
VPS37C-204ENST00000538036 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
VPS37C-204ENST00000538036 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
VPS37C-204ENST00000538036 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
VPS37C-204ENST00000538036 TCOF1Q13428 1488 aaKnown RBP16.55■□□□□ 0.24
VPS37C-204ENST00000538036 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
VPS37C-204ENST00000538036 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
VPS37C-204ENST00000538036 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
VPS37C-204ENST00000538036 RTEL1-TNFRSF6BF6WH68 1400 aa16.53■□□□□ 0.24
VPS37C-204ENST00000538036 ZNF142P52746 1687 aaPredicted RBP16.53■□□□□ 0.24
VPS37C-204ENST00000538036 CEP170BQ9Y4F5 1589 aaPredicted RBP16.52■□□□□ 0.24
VPS37C-204ENST00000538036 CLTCQ00610 1675 aaKnown RBP16.52■□□□□ 0.23
VPS37C-204ENST00000538036 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
VPS37C-204ENST00000538036 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
VPS37C-204ENST00000538036 ZNF644Q9H582 1327 aaPredicted RBP16.49■□□□□ 0.23
VPS37C-204ENST00000538036 A2ML1A8K2U0 1454 aa16.49■□□□□ 0.23
VPS37C-204ENST00000538036 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
VPS37C-204ENST00000538036 RSPH4AQ5TD94 716 aa16.49■□□□□ 0.23
VPS37C-204ENST00000538036 ADGBQ8N7X0 1667 aa16.49■□□□□ 0.23
VPS37C-204ENST00000538036 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
VPS37C-204ENST00000538036 KIF3BO15066 747 aa16.45■□□□□ 0.22
VPS37C-204ENST00000538036 TOM1O60784 492 aa16.45■□□□□ 0.22
VPS37C-204ENST00000538036 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms