RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ACIN1Q9UKV3 1341 aaKnown RBP13.49□□□□□ -0.25
UBE3B-207ENST00000537063 ATP10BO94823 1461 aa13.48□□□□□ -0.25
UBE3B-207ENST00000537063 ADGRL2O95490 1459 aa13.47□□□□□ -0.25
UBE3B-207ENST00000537063 FBLN2P98095 1184 aa13.47□□□□□ -0.25
UBE3B-207ENST00000537063 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
UBE3B-207ENST00000537063 ARID3CA6NKF2 412 aa13.46□□□□□ -0.26
UBE3B-207ENST00000537063 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-207ENST00000537063 NEUROD1Q13562 356 aa13.45□□□□□ -0.26
UBE3B-207ENST00000537063 CENPBP07199 599 aaPredicted RBP13.44□□□□□ -0.26
UBE3B-207ENST00000537063 SHANK2Q9UPX8 1470 aa13.43□□□□□ -0.26
UBE3B-207ENST00000537063 RRP7BPQ9NSQ0 103 aa13.43□□□□□ -0.26
UBE3B-207ENST00000537063 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
UBE3B-207ENST00000537063 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-207ENST00000537063 PREX2Q70Z35 1606 aa13.41□□□□□ -0.26
UBE3B-207ENST00000537063 ARHGEF5Q12774 1597 aa13.41□□□□□ -0.26
UBE3B-207ENST00000537063 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
UBE3B-207ENST00000537063 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
UBE3B-207ENST00000537063 PTPRGP23470 1445 aa13.4□□□□□ -0.26
UBE3B-207ENST00000537063 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
UBE3B-207ENST00000537063 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
UBE3B-207ENST00000537063 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
UBE3B-207ENST00000537063 CFDP1Q9UEE9 299 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-207ENST00000537063 PZPP20742 1482 aa13.37□□□□□ -0.27
UBE3B-207ENST00000537063 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
UBE3B-207ENST00000537063 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
UBE3B-207ENST00000537063 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
UBE3B-207ENST00000537063 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
UBE3B-207ENST00000537063 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
UBE3B-207ENST00000537063 PLEKHD1A6NEE1 506 aa13.35□□□□□ -0.27
UBE3B-207ENST00000537063 KDM5DQ9BY66 1539 aa13.35□□□□□ -0.27
UBE3B-207ENST00000537063 TEX14Q8IWB6 1497 aa13.34□□□□□ -0.27
UBE3B-207ENST00000537063 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
UBE3B-207ENST00000537063 TTC37Q6PGP7 1564 aa13.33□□□□□ -0.28
UBE3B-207ENST00000537063 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
UBE3B-207ENST00000537063 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
UBE3B-207ENST00000537063 ANKRD30AQ9BXX3 1397 aa13.32□□□□□ -0.28
UBE3B-207ENST00000537063 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
UBE3B-207ENST00000537063 MYO5CQ9NQX4 1742 aa13.31□□□□□ -0.28
UBE3B-207ENST00000537063 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBE3B-207ENST00000537063 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
UBE3B-207ENST00000537063 ZCCHC11Q5TAX3 1644 aaKnown RBP13.3□□□□□ -0.28
UBE3B-207ENST00000537063 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
UBE3B-207ENST00000537063 CCDC141Q6ZP82 1450 aa13.28□□□□□ -0.28
UBE3B-207ENST00000537063 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.28
UBE3B-207ENST00000537063 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
UBE3B-207ENST00000537063 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-207ENST00000537063 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
UBE3B-207ENST00000537063 UNC13BO14795 1591 aa13.24□□□□□ -0.29
UBE3B-207ENST00000537063 ZNF777Q9ULD5 760 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-207ENST00000537063 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
UBE3B-207ENST00000537063 SYCP2Q9BX26 1530 aa13.24□□□□□ -0.29
UBE3B-207ENST00000537063 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
UBE3B-207ENST00000537063 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
UBE3B-207ENST00000537063 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
UBE3B-207ENST00000537063 FOXD1Q16676 465 aa13.22□□□□□ -0.29
UBE3B-207ENST00000537063 L3MBTL2Q969R5 705 aa13.22□□□□□ -0.29
UBE3B-207ENST00000537063 ARAP3Q8WWN8 1544 aa13.22□□□□□ -0.29
UBE3B-207ENST00000537063 DDX10Q13206 875 aaKnown RBP13.21□□□□□ -0.29
UBE3B-207ENST00000537063 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
UBE3B-207ENST00000537063 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
UBE3B-207ENST00000537063 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
UBE3B-207ENST00000537063 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
UBE3B-207ENST00000537063 ABCC1P33527 1531 aa13.19□□□□□ -0.3
UBE3B-207ENST00000537063 PLCH2O75038 1416 aa13.18□□□□□ -0.3
UBE3B-207ENST00000537063 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 MAGI2Q86UL8 1455 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 HIRIP3Q9BW71 556 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-207ENST00000537063 FAM135AQ9P2D6 1515 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
UBE3B-207ENST00000537063 HNRNPMP52272 730 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBE3B-207ENST00000537063 UHRF1BP1Q6BDS2 1440 aa13.16□□□□□ -0.3
UBE3B-207ENST00000537063 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
UBE3B-207ENST00000537063 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
UBE3B-207ENST00000537063 NUP155O75694 1391 aa13.15□□□□□ -0.3
UBE3B-207ENST00000537063 DUOX2Q9NRD8 1548 aa13.14□□□□□ -0.31
UBE3B-207ENST00000537063 PKD2Q13563 968 aa13.14□□□□□ -0.31
UBE3B-207ENST00000537063 EIF4G2P78344 907 aaKnown RBP eCLIP13.14□□□□□ -0.31
UBE3B-207ENST00000537063 ABCA9Q8IUA7 1624 aa13.14□□□□□ -0.31
UBE3B-207ENST00000537063 WASHC2AQ641Q2 1341 aa13.14□□□□□ -0.31
UBE3B-207ENST00000537063 KDM5CP41229 1560 aa13.13□□□□□ -0.31
UBE3B-207ENST00000537063 ERBINQ96RT1 1412 aa13.12□□□□□ -0.31
UBE3B-207ENST00000537063 RALGAPBQ86X10 1494 aa13.12□□□□□ -0.31
UBE3B-207ENST00000537063 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
UBE3B-207ENST00000537063 CNTLNQ9NXG0 1405 aa13.11□□□□□ -0.31
UBE3B-207ENST00000537063 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
UBE3B-207ENST00000537063 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
UBE3B-207ENST00000537063 ANP32CO43423 234 aa13.09□□□□□ -0.31
UBE3B-207ENST00000537063 ZFYVE16Q7Z3T8 1539 aa13.09□□□□□ -0.31
UBE3B-207ENST00000537063 ATP10AO60312 1499 aa13.09□□□□□ -0.31
UBE3B-207ENST00000537063 DEPDC5O75140 1603 aa13.08□□□□□ -0.31
UBE3B-207ENST00000537063 INO80Q9ULG1 1556 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-207ENST00000537063 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
UBE3B-207ENST00000537063 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
UBE3B-207ENST00000537063 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
UBE3B-207ENST00000537063 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
UBE3B-207ENST00000537063 TRPM1Q7Z4N2 1603 aa13.05□□□□□ -0.32
UBE3B-207ENST00000537063 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
UBE3B-207ENST00000537063 LAMC1P11047 1609 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms