RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 RBM10P98175 930 aaKnown RBP13.37□□□□□ -0.27
RFX4-204ENST00000536688 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
RFX4-204ENST00000536688 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
RFX4-204ENST00000536688 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
RFX4-204ENST00000536688 CFTRP13569 1480 aa13.35□□□□□ -0.27
RFX4-204ENST00000536688 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
RFX4-204ENST00000536688 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
RFX4-204ENST00000536688 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
RFX4-204ENST00000536688 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
RFX4-204ENST00000536688 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
RFX4-204ENST00000536688 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
RFX4-204ENST00000536688 FRAT2O75474 233 aaPredicted RBP13.33□□□□□ -0.28
RFX4-204ENST00000536688 TPM2P07951 284 aa13.33□□□□□ -0.28
RFX4-204ENST00000536688 RRP1P56182 461 aaKnown RBP13.32□□□□□ -0.28
RFX4-204ENST00000536688 FANCD2Q9BXW9 1451 aa13.32□□□□□ -0.28
RFX4-204ENST00000536688 CFAP43Q8NDM7 1665 aa13.31□□□□□ -0.28
RFX4-204ENST00000536688 PRDM4Q9UKN5 801 aa13.31□□□□□ -0.28
RFX4-204ENST00000536688 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
RFX4-204ENST00000536688 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
RFX4-204ENST00000536688 CCDC18Q5T9S5 1454 aa13.28□□□□□ -0.28
RFX4-204ENST00000536688 HFM1A2PYH4 1435 aa13.28□□□□□ -0.28
RFX4-204ENST00000536688 PDE4CQ08493 712 aa13.27□□□□□ -0.28
RFX4-204ENST00000536688 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.28
RFX4-204ENST00000536688 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.28
RFX4-204ENST00000536688 RANGAP1P46060 587 aaPredicted RBP13.27□□□□□ -0.29
RFX4-204ENST00000536688 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
RFX4-204ENST00000536688 FSD2A1L4K1 749 aa13.25□□□□□ -0.29
RFX4-204ENST00000536688 MAP7D2Q96T17 732 aa13.24□□□□□ -0.29
RFX4-204ENST00000536688 PTPN23Q9H3S7 1636 aa13.23□□□□□ -0.29
RFX4-204ENST00000536688 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
RFX4-204ENST00000536688 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
RFX4-204ENST00000536688 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
RFX4-204ENST00000536688 ISY1Q9ULR0 285 aaKnown RBP13.22□□□□□ -0.29
RFX4-204ENST00000536688 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
RFX4-204ENST00000536688 WDR62O43379 1518 aa13.22□□□□□ -0.29
RFX4-204ENST00000536688 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.29
RFX4-204ENST00000536688 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.29
RFX4-204ENST00000536688 TERF1P54274 439 aa13.21□□□□□ -0.29
RFX4-204ENST00000536688 POGKQ9P215 609 aa13.21□□□□□ -0.29
RFX4-204ENST00000536688 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
RFX4-204ENST00000536688 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.29
RFX4-204ENST00000536688 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
RFX4-204ENST00000536688 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
RFX4-204ENST00000536688 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
RFX4-204ENST00000536688 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
RFX4-204ENST00000536688 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
RFX4-204ENST00000536688 SLC4A3P48751 1232 aa13.2□□□□□ -0.3
RFX4-204ENST00000536688 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
RFX4-204ENST00000536688 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
RFX4-204ENST00000536688 VIRMAQ69YN4 1812 aaKnown RBP13.18□□□□□ -0.3
RFX4-204ENST00000536688 CUX1P39880 1505 aa13.18□□□□□ -0.3
RFX4-204ENST00000536688 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
RFX4-204ENST00000536688 ESPNB1AK53 854 aa13.17□□□□□ -0.3
RFX4-204ENST00000536688 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
RFX4-204ENST00000536688 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
RFX4-204ENST00000536688 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
RFX4-204ENST00000536688 MRE11P49959 708 aa13.17□□□□□ -0.3
RFX4-204ENST00000536688 KDM2BQ8NHM5 1336 aa13.17□□□□□ -0.3
RFX4-204ENST00000536688 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
RFX4-204ENST00000536688 C8orf34Q49A92 452 aa13.16□□□□□ -0.3
RFX4-204ENST00000536688 KIF7Q2M1P5 1343 aa13.16□□□□□ -0.3
RFX4-204ENST00000536688 MIA2Q96PC5 1412 aa13.16□□□□□ -0.3
RFX4-204ENST00000536688 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
RFX4-204ENST00000536688 KIF27Q86VH2 1401 aa13.14□□□□□ -0.31
RFX4-204ENST00000536688 INSRP06213 1382 aa13.14□□□□□ -0.31
RFX4-204ENST00000536688 BECN1Q14457 450 aa13.14□□□□□ -0.31
RFX4-204ENST00000536688 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
RFX4-204ENST00000536688 NAIPQ13075 1403 aa13.14□□□□□ -0.31
RFX4-204ENST00000536688 PDIA4P13667 645 aaKnown RBP13.14□□□□□ -0.31
RFX4-204ENST00000536688 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
RFX4-204ENST00000536688 BRD4O60885 1362 aaPredicted RBP13.13□□□□□ -0.31
RFX4-204ENST00000536688 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
RFX4-204ENST00000536688 UTP14CQ5TAP6 766 aaKnown RBP13.11□□□□□ -0.31
RFX4-204ENST00000536688 RGS3P49796 1198 aa13.11□□□□□ -0.31
RFX4-204ENST00000536688 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
RFX4-204ENST00000536688 TOPBP1Q92547 1522 aa13.11□□□□□ -0.31
RFX4-204ENST00000536688 MYH16Q9H6N6 1097 aa13.1□□□□□ -0.31
RFX4-204ENST00000536688 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
RFX4-204ENST00000536688 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.31
RFX4-204ENST00000536688 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.31
RFX4-204ENST00000536688 TMC1Q8TDI8 760 aa13.08□□□□□ -0.32
RFX4-204ENST00000536688 GCC2Q8IWJ2 1684 aa13.07□□□□□ -0.32
RFX4-204ENST00000536688 CCDC144AA2RUR9 1427 aa13.07□□□□□ -0.32
RFX4-204ENST00000536688 PCF11O94913 1555 aaKnown RBP13.07□□□□□ -0.32
RFX4-204ENST00000536688 DNMBPQ6XZF7 1577 aa13.06□□□□□ -0.32
RFX4-204ENST00000536688 PLEKHH2Q8IVE3 1493 aa13.06□□□□□ -0.32
RFX4-204ENST00000536688 PANK2Q9BZ23 570 aa13.05□□□□□ -0.32
RFX4-204ENST00000536688 OFD1O75665 1012 aa13.05□□□□□ -0.32
RFX4-204ENST00000536688 KIAA1211Q6ZU35 1233 aa13.05□□□□□ -0.32
RFX4-204ENST00000536688 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
RFX4-204ENST00000536688 TRIM44Q96DX7 344 aaPredicted RBP13.04□□□□□ -0.32
RFX4-204ENST00000536688 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
RFX4-204ENST00000536688 PTPRKQ15262 1439 aa13.04□□□□□ -0.32
RFX4-204ENST00000536688 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
RFX4-204ENST00000536688 GRPEL1Q9HAV7 217 aa13.04□□□□□ -0.32
RFX4-204ENST00000536688 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
RFX4-204ENST00000536688 RALBP1Q15311 655 aa13.03□□□□□ -0.32
RFX4-204ENST00000536688 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
RFX4-204ENST00000536688 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
RFX4-204ENST00000536688 RPRD2Q5VT52 1461 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms