RNA–Protein interactions for RNA: ENST00000536675.2

CDH20-202, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-202ENST00000536675 NBPF8Q3BBV2 869 aa19.73■□□□□ 0.75
CDH20-202ENST00000536675 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
CDH20-202ENST00000536675 KIF7Q2M1P5 1343 aa19.72■□□□□ 0.75
CDH20-202ENST00000536675 NBR1Q14596 966 aa19.72■□□□□ 0.75
CDH20-202ENST00000536675 SMG6Q86US8 1419 aaKnown RBP19.72■□□□□ 0.75
CDH20-202ENST00000536675 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
CDH20-202ENST00000536675 KIF21AQ7Z4S6 1674 aa19.7■□□□□ 0.74
CDH20-202ENST00000536675 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
CDH20-202ENST00000536675 TEX14Q8IWB6 1497 aa19.68■□□□□ 0.74
CDH20-202ENST00000536675 ANKRD30BQ9BXX2 1392 aa19.67■□□□□ 0.74
CDH20-202ENST00000536675 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
CDH20-202ENST00000536675 NUDCQ9Y266 331 aa19.65■□□□□ 0.74
CDH20-202ENST00000536675 CCDC136Q96JN2 1154 aa19.64■□□□□ 0.73
CDH20-202ENST00000536675 IPO9Q96P70 1041 aaKnown RBP19.63■□□□□ 0.73
CDH20-202ENST00000536675 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
CDH20-202ENST00000536675 NESP48681 1621 aa19.62■□□□□ 0.73
CDH20-202ENST00000536675 MIA2Q96PC5 1412 aa19.62■□□□□ 0.73
CDH20-202ENST00000536675 DHX29Q7Z478 1369 aaKnown RBP19.62■□□□□ 0.73
CDH20-202ENST00000536675 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
CDH20-202ENST00000536675 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
CDH20-202ENST00000536675 CNGB1Q14028 1251 aaPredicted RBP19.58■□□□□ 0.73
CDH20-202ENST00000536675 LAMC3Q9Y6N6 1575 aa19.58■□□□□ 0.73
CDH20-202ENST00000536675 EPRSP07814 1512 aaKnown RBP19.58■□□□□ 0.73
CDH20-202ENST00000536675 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.72
CDH20-202ENST00000536675 BCORL1Q5H9F3 1711 aa19.57■□□□□ 0.72
CDH20-202ENST00000536675 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
CDH20-202ENST00000536675 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
CDH20-202ENST00000536675 ROCK1Q13464 1354 aa19.55■□□□□ 0.72
CDH20-202ENST00000536675 DAPK1P53355 1430 aa19.54■□□□□ 0.72
CDH20-202ENST00000536675 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
CDH20-202ENST00000536675 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
CDH20-202ENST00000536675 RTL5Q5HYW3 569 aaPredicted RBP19.51■□□□□ 0.71
CDH20-202ENST00000536675 DNMT1P26358 1616 aaKnown RBP19.51■□□□□ 0.71
CDH20-202ENST00000536675 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
CDH20-202ENST00000536675 ABCC5O15440 1437 aa19.5■□□□□ 0.71
CDH20-202ENST00000536675 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
CDH20-202ENST00000536675 PNISRQ8TF01 805 aaKnown RBP19.5■□□□□ 0.71
CDH20-202ENST00000536675 USP47Q96K76 1375 aa19.48■□□□□ 0.71
CDH20-202ENST00000536675 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
CDH20-202ENST00000536675 WDR62O43379 1518 aa19.48■□□□□ 0.71
CDH20-202ENST00000536675 PZPP20742 1482 aa19.45■□□□□ 0.7
CDH20-202ENST00000536675 KDM5CP41229 1560 aa19.45■□□□□ 0.7
CDH20-202ENST00000536675 ZNF644Q9H582 1327 aaPredicted RBP19.45■□□□□ 0.7
CDH20-202ENST00000536675 TMC1Q8TDI8 760 aa19.44■□□□□ 0.7
CDH20-202ENST00000536675 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
CDH20-202ENST00000536675 KIF14Q15058 1648 aa19.43■□□□□ 0.7
CDH20-202ENST00000536675 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
CDH20-202ENST00000536675 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
CDH20-202ENST00000536675 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
CDH20-202ENST00000536675 LRPPRCP42704 1394 aaKnown RBP19.4■□□□□ 0.7
CDH20-202ENST00000536675 RRP1P56182 461 aaKnown RBP19.39■□□□□ 0.7
CDH20-202ENST00000536675 EXOC6Q8TAG9 804 aa19.38■□□□□ 0.69
CDH20-202ENST00000536675 KIAA1107Q9UPP5 1409 aa19.37■□□□□ 0.69
CDH20-202ENST00000536675 TCERG1O14776 1098 aaKnown RBP19.37■□□□□ 0.69
CDH20-202ENST00000536675 PBRM1Q86U86 1689 aa19.37■□□□□ 0.69
CDH20-202ENST00000536675 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
CDH20-202ENST00000536675 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
CDH20-202ENST00000536675 KIF15Q9NS87 1388 aa19.35■□□□□ 0.69
CDH20-202ENST00000536675 PDE4AP27815 886 aa19.34■□□□□ 0.69
CDH20-202ENST00000536675 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
CDH20-202ENST00000536675 BRD4O60885 1362 aaPredicted RBP19.34■□□□□ 0.69
CDH20-202ENST00000536675 IL27Q8NEV9 243 aa19.34■□□□□ 0.69
CDH20-202ENST00000536675 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.69
CDH20-202ENST00000536675 PRKCSHP14314 528 aaPredicted RBP19.33■□□□□ 0.68
CDH20-202ENST00000536675 LAS1LQ9Y4W2 734 aaKnown RBP19.33■□□□□ 0.68
CDH20-202ENST00000536675 MYBBP1AQ9BQG0 1328 aaKnown RBP19.32■□□□□ 0.68
CDH20-202ENST00000536675 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
CDH20-202ENST00000536675 BACH2Q9BYV9 841 aa19.32■□□□□ 0.68
CDH20-202ENST00000536675 RALGAPBQ86X10 1494 aa19.32■□□□□ 0.68
CDH20-202ENST00000536675 PKD2Q13563 968 aa19.31■□□□□ 0.68
CDH20-202ENST00000536675 NEFMP07197 916 aa19.31■□□□□ 0.68
CDH20-202ENST00000536675 UHRF1BP1Q6BDS2 1440 aa19.3■□□□□ 0.68
CDH20-202ENST00000536675 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
CDH20-202ENST00000536675 CAMSAP2Q08AD1 1489 aa19.29■□□□□ 0.68
CDH20-202ENST00000536675 RALBP1Q15311 655 aa19.29■□□□□ 0.68
CDH20-202ENST00000536675 CARD11Q9BXL7 1154 aa19.29■□□□□ 0.68
CDH20-202ENST00000536675 E9PCH4 1651 aa19.29■□□□□ 0.68
CDH20-202ENST00000536675 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
CDH20-202ENST00000536675 NUP153P49790 1475 aaKnown RBP19.28■□□□□ 0.68
CDH20-202ENST00000536675 KTN1Q86UP2 1357 aaKnown RBP19.28■□□□□ 0.68
CDH20-202ENST00000536675 MS4A1P11836 297 aa19.28■□□□□ 0.68
CDH20-202ENST00000536675 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
CDH20-202ENST00000536675 ST20-MTHFSA0A0A6YYL1 179 aa19.26■□□□□ 0.67
CDH20-202ENST00000536675 CROCC2H7BZ55 1655 aa19.26■□□□□ 0.67
CDH20-202ENST00000536675 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
CDH20-202ENST00000536675 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
CDH20-202ENST00000536675 RAPGEF6Q8TEU7 1601 aa19.24■□□□□ 0.67
CDH20-202ENST00000536675 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
CDH20-202ENST00000536675 RTN4Q9NQC3 1192 aaKnown RBP19.23■□□□□ 0.67
CDH20-202ENST00000536675 CFDP1Q9UEE9 299 aaPredicted RBP19.23■□□□□ 0.67
CDH20-202ENST00000536675 ITSN2Q9NZM3 1697 aa19.22■□□□□ 0.67
CDH20-202ENST00000536675 PDE3BQ13370 1112 aa19.22■□□□□ 0.67
CDH20-202ENST00000536675 DISP1Q96F81 1524 aa19.22■□□□□ 0.67
CDH20-202ENST00000536675 ARHGEF12Q9NZN5 1544 aa19.22■□□□□ 0.67
CDH20-202ENST00000536675 PPM1GO15355 546 aaPredicted RBP19.22■□□□□ 0.67
CDH20-202ENST00000536675 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
CDH20-202ENST00000536675 WASHC2CQ9Y4E1 1318 aa19.21■□□□□ 0.67
CDH20-202ENST00000536675 CDCA7LQ96GN5 454 aa19.2■□□□□ 0.66
CDH20-202ENST00000536675 KDM2AQ9Y2K7 1162 aa19.2■□□□□ 0.66
CDH20-202ENST00000536675 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms