RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 ZFYVE16Q7Z3T8 1539 aa12.78□□□□□ -0.36
PRKCH-202ENST00000536400 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.36
PRKCH-202ENST00000536400 FER1L4A9Z1Z3 1794 aa12.77□□□□□ -0.36
PRKCH-202ENST00000536400 SOCS7O14512 581 aa12.76□□□□□ -0.37
PRKCH-202ENST00000536400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRKCH-202ENST00000536400 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
PRKCH-202ENST00000536400 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
PRKCH-202ENST00000536400 HECW1Q76N89 1606 aa12.74□□□□□ -0.37
PRKCH-202ENST00000536400 PREX1Q8TCU6 1659 aa12.73□□□□□ -0.37
PRKCH-202ENST00000536400 MLECQ14165 292 aa12.73□□□□□ -0.37
PRKCH-202ENST00000536400 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
PRKCH-202ENST00000536400 STRCQ7RTU9 1775 aa12.72□□□□□ -0.37
PRKCH-202ENST00000536400 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
PRKCH-202ENST00000536400 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
PRKCH-202ENST00000536400 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
PRKCH-202ENST00000536400 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
PRKCH-202ENST00000536400 ATP10AO60312 1499 aa12.69□□□□□ -0.38
PRKCH-202ENST00000536400 PLCH2O75038 1416 aa12.68□□□□□ -0.38
PRKCH-202ENST00000536400 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
PRKCH-202ENST00000536400 CEBPAP49715 358 aaPredicted RBP12.67□□□□□ -0.38
PRKCH-202ENST00000536400 SPATA31D1Q6ZQQ2 1576 aa12.66□□□□□ -0.38
PRKCH-202ENST00000536400 PTPRTO14522 1441 aa12.64□□□□□ -0.39
PRKCH-202ENST00000536400 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
PRKCH-202ENST00000536400 RANGAP1P46060 587 aaPredicted RBP12.64□□□□□ -0.39
PRKCH-202ENST00000536400 CDK13Q14004 1512 aaKnown RBP12.63□□□□□ -0.39
PRKCH-202ENST00000536400 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
PRKCH-202ENST00000536400 MYO5CQ9NQX4 1742 aa12.62□□□□□ -0.39
PRKCH-202ENST00000536400 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
PRKCH-202ENST00000536400 KDM5CP41229 1560 aa12.6□□□□□ -0.39
PRKCH-202ENST00000536400 ZNF518AQ6AHZ1 1483 aa12.6□□□□□ -0.39
PRKCH-202ENST00000536400 C3P01024 1663 aa12.6□□□□□ -0.39
PRKCH-202ENST00000536400 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
PRKCH-202ENST00000536400 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
PRKCH-202ENST00000536400 EEA1Q15075 1411 aa12.58□□□□□ -0.4
PRKCH-202ENST00000536400 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
PRKCH-202ENST00000536400 AFAP1Q8N556 730 aa12.57□□□□□ -0.4
PRKCH-202ENST00000536400 KIF14Q15058 1648 aa12.56□□□□□ -0.4
PRKCH-202ENST00000536400 NCOA1Q15788 1441 aa12.55□□□□□ -0.4
PRKCH-202ENST00000536400 TRAPPC8Q9Y2L5 1435 aa12.55□□□□□ -0.4
PRKCH-202ENST00000536400 AGLP35573 1532 aa12.55□□□□□ -0.4
PRKCH-202ENST00000536400 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
PRKCH-202ENST00000536400 MLH3Q9UHC1 1453 aa12.54□□□□□ -0.4
PRKCH-202ENST00000536400 ARHGAP5Q13017 1502 aa12.54□□□□□ -0.4
PRKCH-202ENST00000536400 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-202ENST00000536400 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-202ENST00000536400 FMN1Q68DA7 1419 aa12.52□□□□□ -0.41
PRKCH-202ENST00000536400 CDC42BPBQ9Y5S2 1711 aa12.51□□□□□ -0.41
PRKCH-202ENST00000536400 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
PRKCH-202ENST00000536400 CNTLNQ9NXG0 1405 aa12.5□□□□□ -0.41
PRKCH-202ENST00000536400 CAMSAP1Q5T5Y3 1602 aa12.5□□□□□ -0.41
PRKCH-202ENST00000536400 ESF1Q9H501 851 aaKnown RBP12.49□□□□□ -0.41
PRKCH-202ENST00000536400 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
PRKCH-202ENST00000536400 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
PRKCH-202ENST00000536400 ABCC1P33527 1531 aa12.48□□□□□ -0.41
PRKCH-202ENST00000536400 NPATQ14207 1427 aa12.48□□□□□ -0.41
PRKCH-202ENST00000536400 ARHGAP35Q9NRY4 1499 aa12.47□□□□□ -0.41
PRKCH-202ENST00000536400 CLIP1P30622 1438 aa12.47□□□□□ -0.41
PRKCH-202ENST00000536400 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
PRKCH-202ENST00000536400 MROH2AA6NES4 1674 aa12.47□□□□□ -0.41
PRKCH-202ENST00000536400 ITSN2Q9NZM3 1697 aa12.47□□□□□ -0.41
PRKCH-202ENST00000536400 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
PRKCH-202ENST00000536400 PREX2Q70Z35 1606 aa12.46□□□□□ -0.41
PRKCH-202ENST00000536400 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
PRKCH-202ENST00000536400 ZMYM3Q14202 1370 aa12.44□□□□□ -0.42
PRKCH-202ENST00000536400 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
PRKCH-202ENST00000536400 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
PRKCH-202ENST00000536400 ZNF142P52746 1687 aaPredicted RBP12.42□□□□□ -0.42
PRKCH-202ENST00000536400 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
PRKCH-202ENST00000536400 PKD2Q13563 968 aa12.42□□□□□ -0.42
PRKCH-202ENST00000536400 CDC42BPAQ5VT25 1732 aa12.41□□□□□ -0.42
PRKCH-202ENST00000536400 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
PRKCH-202ENST00000536400 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
PRKCH-202ENST00000536400 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
PRKCH-202ENST00000536400 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
PRKCH-202ENST00000536400 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
PRKCH-202ENST00000536400 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
PRKCH-202ENST00000536400 PTPRKQ15262 1439 aa12.38□□□□□ -0.43
PRKCH-202ENST00000536400 KCNA4P22459 653 aa12.38□□□□□ -0.43
PRKCH-202ENST00000536400 CCDC18Q5T9S5 1454 aa12.37□□□□□ -0.43
PRKCH-202ENST00000536400 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
PRKCH-202ENST00000536400 MED1Q15648 1581 aaPredicted RBP12.37□□□□□ -0.43
PRKCH-202ENST00000536400 HSPA1LP34931 641 aa12.36□□□□□ -0.43
PRKCH-202ENST00000536400 CASKIN1Q8WXD9 1431 aa12.36□□□□□ -0.43
PRKCH-202ENST00000536400 SPAG9O60271 1321 aaKnown RBP12.36□□□□□ -0.43
PRKCH-202ENST00000536400 SYCP2Q9BX26 1530 aa12.35□□□□□ -0.43
PRKCH-202ENST00000536400 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
PRKCH-202ENST00000536400 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
PRKCH-202ENST00000536400 INO80Q9ULG1 1556 aaPredicted RBP12.34□□□□□ -0.43
PRKCH-202ENST00000536400 A2MP01023 1474 aa12.34□□□□□ -0.43
PRKCH-202ENST00000536400 A2ML1A8K2U0 1454 aa12.33□□□□□ -0.44
PRKCH-202ENST00000536400 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.44
PRKCH-202ENST00000536400 CPS1P31327 1500 aa12.32□□□□□ -0.44
PRKCH-202ENST00000536400 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
PRKCH-202ENST00000536400 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
PRKCH-202ENST00000536400 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.44
PRKCH-202ENST00000536400 ZNF777Q9ULD5 760 aaPredicted RBP12.32□□□□□ -0.44
PRKCH-202ENST00000536400 TOM1O60784 492 aa12.31□□□□□ -0.44
PRKCH-202ENST00000536400 GGT6Q6P531 493 aa12.31□□□□□ -0.44
PRKCH-202ENST00000536400 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
PRKCH-202ENST00000536400 NEURL4Q96JN8 1562 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms