RNA–Protein interactions for RNA: ENST00000536072.6

EDC4-202, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-202ENST00000536072 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
EDC4-202ENST00000536072 PLEKHD1A6NEE1 506 aa23.88■■□□□ 1.41
EDC4-202ENST00000536072 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
EDC4-202ENST00000536072 CAMSAP2Q08AD1 1489 aa23.86■■□□□ 1.41
EDC4-202ENST00000536072 ROCK1Q13464 1354 aa23.85■■□□□ 1.41
EDC4-202ENST00000536072 ITSN2Q9NZM3 1697 aa23.85■■□□□ 1.41
EDC4-202ENST00000536072 ZNF777Q9ULD5 760 aaPredicted RBP23.85■■□□□ 1.41
EDC4-202ENST00000536072 TONSLQ96HA7 1378 aa23.84■■□□□ 1.41
EDC4-202ENST00000536072 DENND4BO75064 1496 aaPredicted RBP23.82■■□□□ 1.4
EDC4-202ENST00000536072 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
EDC4-202ENST00000536072 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
EDC4-202ENST00000536072 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
EDC4-202ENST00000536072 MPHOSPH9Q99550 1183 aa23.79■■□□□ 1.4
EDC4-202ENST00000536072 ABCC10Q5T3U5 1492 aa23.78■■□□□ 1.4
EDC4-202ENST00000536072 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
EDC4-202ENST00000536072 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
EDC4-202ENST00000536072 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
EDC4-202ENST00000536072 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
EDC4-202ENST00000536072 FOXD1Q16676 465 aa23.72■■□□□ 1.39
EDC4-202ENST00000536072 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
EDC4-202ENST00000536072 HIRIP3Q9BW71 556 aaPredicted RBP23.69■■□□□ 1.38
EDC4-202ENST00000536072 CROCC2H7BZ55 1655 aa23.68■■□□□ 1.38
EDC4-202ENST00000536072 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
EDC4-202ENST00000536072 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
EDC4-202ENST00000536072 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
EDC4-202ENST00000536072 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
EDC4-202ENST00000536072 SLC4A1APQ9BWU0 796 aaKnown RBP23.64■■□□□ 1.37
EDC4-202ENST00000536072 ANKRD30AQ9BXX3 1397 aa23.64■■□□□ 1.37
EDC4-202ENST00000536072 ABCC2Q92887 1545 aa23.62■■□□□ 1.37
EDC4-202ENST00000536072 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
EDC4-202ENST00000536072 HNRNPMP52272 730 aaKnown RBP eCLIP23.6■■□□□ 1.37
EDC4-202ENST00000536072 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
EDC4-202ENST00000536072 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
EDC4-202ENST00000536072 PZPP20742 1482 aa23.58■■□□□ 1.37
EDC4-202ENST00000536072 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
EDC4-202ENST00000536072 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
EDC4-202ENST00000536072 TSPY10P0CW01 314 aa23.56■■□□□ 1.36
EDC4-202ENST00000536072 ANKRD50Q9ULJ7 1429 aa23.56■■□□□ 1.36
EDC4-202ENST00000536072 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
EDC4-202ENST00000536072 L3MBTL2Q969R5 705 aa23.56■■□□□ 1.36
EDC4-202ENST00000536072 PREX2Q70Z35 1606 aa23.55■■□□□ 1.36
EDC4-202ENST00000536072 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
EDC4-202ENST00000536072 MBD5Q9P267 1494 aa23.55■■□□□ 1.36
EDC4-202ENST00000536072 TTC37Q6PGP7 1564 aa23.54■■□□□ 1.36
EDC4-202ENST00000536072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.36
EDC4-202ENST00000536072 RPRD2Q5VT52 1461 aaKnown RBP23.53■■□□□ 1.36
EDC4-202ENST00000536072 ARHGEF5Q12774 1597 aa23.52■■□□□ 1.36
EDC4-202ENST00000536072 KCNH8Q96L42 1107 aa23.52■■□□□ 1.36
EDC4-202ENST00000536072 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
EDC4-202ENST00000536072 ARHGAP5Q13017 1502 aa23.48■■□□□ 1.35
EDC4-202ENST00000536072 MYT1Q01538 1121 aa23.48■■□□□ 1.35
EDC4-202ENST00000536072 CCDC141Q6ZP82 1450 aa23.48■■□□□ 1.35
EDC4-202ENST00000536072 KIF15Q9NS87 1388 aa23.48■■□□□ 1.35
EDC4-202ENST00000536072 UHRF1BP1LA0JNW5 1464 aa23.47■■□□□ 1.35
EDC4-202ENST00000536072 ZCCHC11Q5TAX3 1644 aaKnown RBP23.47■■□□□ 1.35
EDC4-202ENST00000536072 PKD2Q13563 968 aa23.47■■□□□ 1.35
EDC4-202ENST00000536072 KIAA1107Q9UPP5 1409 aa23.46■■□□□ 1.35
EDC4-202ENST00000536072 TEX14Q8IWB6 1497 aa23.45■■□□□ 1.34
EDC4-202ENST00000536072 SYCP2Q9BX26 1530 aa23.45■■□□□ 1.34
EDC4-202ENST00000536072 NUP155O75694 1391 aa23.45■■□□□ 1.34
EDC4-202ENST00000536072 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
EDC4-202ENST00000536072 HSPA5P11021 654 aaKnown RBP23.42■■□□□ 1.34
EDC4-202ENST00000536072 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
EDC4-202ENST00000536072 NBPF8Q3BBV2 869 aa23.4■■□□□ 1.34
EDC4-202ENST00000536072 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
EDC4-202ENST00000536072 PLCH2O75038 1416 aa23.35■■□□□ 1.33
EDC4-202ENST00000536072 KDM5DQ9BY66 1539 aa23.35■■□□□ 1.33
EDC4-202ENST00000536072 PLEKHH2Q8IVE3 1493 aa23.34■■□□□ 1.33
EDC4-202ENST00000536072 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.33
EDC4-202ENST00000536072 MAST1Q9Y2H9 1570 aa23.32■■□□□ 1.32
EDC4-202ENST00000536072 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
EDC4-202ENST00000536072 WASHC2AQ641Q2 1341 aa23.3■■□□□ 1.32
EDC4-202ENST00000536072 ANP32CO43423 234 aa23.3■■□□□ 1.32
EDC4-202ENST00000536072 FAM135AQ9P2D6 1515 aa23.26■■□□□ 1.31
EDC4-202ENST00000536072 PLXNC1O60486 1568 aa23.24■■□□□ 1.31
EDC4-202ENST00000536072 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
EDC4-202ENST00000536072 ABCC1P33527 1531 aa23.24■■□□□ 1.31
EDC4-202ENST00000536072 WDR7Q9Y4E6 1490 aa23.23■■□□□ 1.31
EDC4-202ENST00000536072 C11orf95C9JLR9 678 aaPredicted RBP23.23■■□□□ 1.31
EDC4-202ENST00000536072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.313e-6■■■■□ 22.5
EDC4-202ENST00000536072 TRAPPC8Q9Y2L5 1435 aa23.22■■□□□ 1.31
EDC4-202ENST00000536072 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
EDC4-202ENST00000536072 CCER2I3L3R5 266 aa23.21■■□□□ 1.31
EDC4-202ENST00000536072 SPATA31E1Q6ZUB1 1445 aa23.2■■□□□ 1.3
EDC4-202ENST00000536072 UNC13BO14795 1591 aa23.19■■□□□ 1.3
EDC4-202ENST00000536072 DUOX2Q9NRD8 1548 aa23.19■■□□□ 1.3
EDC4-202ENST00000536072 CCDC7Q96M83 1385 aa23.17■■□□□ 1.3
EDC4-202ENST00000536072 AFAP1Q8N556 730 aa23.16■■□□□ 1.3
EDC4-202ENST00000536072 ARAP3Q8WWN8 1544 aa23.16■■□□□ 1.3
EDC4-202ENST00000536072 ERBINQ96RT1 1412 aa23.14■■□□□ 1.29
EDC4-202ENST00000536072 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
EDC4-202ENST00000536072 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
EDC4-202ENST00000536072 KDM2AQ9Y2K7 1162 aa23.13■■□□□ 1.29
EDC4-202ENST00000536072 UHRF1BP1Q6BDS2 1440 aa23.13■■□□□ 1.29
EDC4-202ENST00000536072 IQGAP3Q86VI3 1631 aa23.11■■□□□ 1.29
EDC4-202ENST00000536072 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
EDC4-202ENST00000536072 CNTLNQ9NXG0 1405 aa23.11■■□□□ 1.29
EDC4-202ENST00000536072 FANCAO15360 1455 aa23.11■■□□□ 1.29
EDC4-202ENST00000536072 ABCA9Q8IUA7 1624 aa23.1■■□□□ 1.29
EDC4-202ENST00000536072 USP47Q96K76 1375 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms