RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
CHFR-211ENST00000535897 MAGI2Q86UL8 1455 aa13.41□□□□□ -0.26
CHFR-211ENST00000535897 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
CHFR-211ENST00000535897 MYO5CQ9NQX4 1742 aa13.39□□□□□ -0.27
CHFR-211ENST00000535897 PLCH2O75038 1416 aa13.38□□□□□ -0.27
CHFR-211ENST00000535897 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
CHFR-211ENST00000535897 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
CHFR-211ENST00000535897 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
CHFR-211ENST00000535897 CDK11AQ9UQ88 783 aaPredicted RBP13.35□□□□□ -0.27
CHFR-211ENST00000535897 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
CHFR-211ENST00000535897 ATP10AO60312 1499 aa13.35□□□□□ -0.27
CHFR-211ENST00000535897 PREX1Q8TCU6 1659 aa13.34□□□□□ -0.27
CHFR-211ENST00000535897 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
CHFR-211ENST00000535897 KIF14Q15058 1648 aa13.34□□□□□ -0.27
CHFR-211ENST00000535897 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
CHFR-211ENST00000535897 ARHGAP5Q13017 1502 aa13.33□□□□□ -0.28
CHFR-211ENST00000535897 ARHGEF12Q9NZN5 1544 aa13.33□□□□□ -0.28
CHFR-211ENST00000535897 CLIP1P30622 1438 aa13.31□□□□□ -0.28
CHFR-211ENST00000535897 ZNF518AQ6AHZ1 1483 aa13.31□□□□□ -0.28
CHFR-211ENST00000535897 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
CHFR-211ENST00000535897 ARHGAP35Q9NRY4 1499 aa13.29□□□□□ -0.28
CHFR-211ENST00000535897 AFAP1Q8N556 730 aa13.28□□□□□ -0.28
CHFR-211ENST00000535897 TROQ12816 1431 aaPredicted RBP13.28□□□□□ -0.28
CHFR-211ENST00000535897 KDM5CP41229 1560 aa13.27□□□□□ -0.29
CHFR-211ENST00000535897 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
CHFR-211ENST00000535897 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
CHFR-211ENST00000535897 DIP2CQ9Y2E4 1556 aa13.26□□□□□ -0.29
CHFR-211ENST00000535897 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
CHFR-211ENST00000535897 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
CHFR-211ENST00000535897 ABCA6Q8N139 1617 aa13.24□□□□□ -0.29
CHFR-211ENST00000535897 CDC42BPBQ9Y5S2 1711 aa13.24□□□□□ -0.29
CHFR-211ENST00000535897 STRCQ7RTU9 1775 aa13.23□□□□□ -0.29
CHFR-211ENST00000535897 PREX2Q70Z35 1606 aa13.23□□□□□ -0.29
CHFR-211ENST00000535897 C3P01024 1663 aa13.22□□□□□ -0.29
CHFR-211ENST00000535897 REREQ9P2R6 1566 aa13.22□□□□□ -0.29
CHFR-211ENST00000535897 ABCC1P33527 1531 aa13.21□□□□□ -0.29
CHFR-211ENST00000535897 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
CHFR-211ENST00000535897 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.3
CHFR-211ENST00000535897 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
CHFR-211ENST00000535897 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
CHFR-211ENST00000535897 TRAPPC8Q9Y2L5 1435 aa13.2□□□□□ -0.3
CHFR-211ENST00000535897 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
CHFR-211ENST00000535897 AGLP35573 1532 aa13.18□□□□□ -0.3
CHFR-211ENST00000535897 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
CHFR-211ENST00000535897 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
CHFR-211ENST00000535897 CDC42BPAQ5VT25 1732 aa13.16□□□□□ -0.3
CHFR-211ENST00000535897 KIDINS220Q9ULH0 1771 aa13.16□□□□□ -0.3
CHFR-211ENST00000535897 PTPRTO14522 1441 aa13.15□□□□□ -0.3
CHFR-211ENST00000535897 CNTLNQ9NXG0 1405 aa13.15□□□□□ -0.3
CHFR-211ENST00000535897 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
CHFR-211ENST00000535897 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
CHFR-211ENST00000535897 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
CHFR-211ENST00000535897 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
CHFR-211ENST00000535897 FYCO1Q9BQS8 1478 aa13.12□□□□□ -0.31
CHFR-211ENST00000535897 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
CHFR-211ENST00000535897 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
CHFR-211ENST00000535897 SPATA31D1Q6ZQQ2 1576 aa13.11□□□□□ -0.31
CHFR-211ENST00000535897 NCOA1Q15788 1441 aa13.11□□□□□ -0.31
CHFR-211ENST00000535897 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
CHFR-211ENST00000535897 ILDR2Q71H61 639 aa13.1□□□□□ -0.31
CHFR-211ENST00000535897 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
CHFR-211ENST00000535897 CLTCQ00610 1675 aaKnown RBP13.09□□□□□ -0.31
CHFR-211ENST00000535897 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHFR-211ENST00000535897 NPATQ14207 1427 aa13.09□□□□□ -0.31
CHFR-211ENST00000535897 ATP7AQ04656 1500 aa13.08□□□□□ -0.31
CHFR-211ENST00000535897 GPATCH8Q9UKJ3 1502 aaKnown RBP13.08□□□□□ -0.32
CHFR-211ENST00000535897 ZMYM3Q14202 1370 aa13.07□□□□□ -0.32
CHFR-211ENST00000535897 SOCS7O14512 581 aa13.07□□□□□ -0.32
CHFR-211ENST00000535897 CFDP1Q9UEE9 299 aaPredicted RBP13.07□□□□□ -0.32
CHFR-211ENST00000535897 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
CHFR-211ENST00000535897 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
CHFR-211ENST00000535897 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
CHFR-211ENST00000535897 INO80Q9ULG1 1556 aaPredicted RBP13.06□□□□□ -0.32
CHFR-211ENST00000535897 CCNB3Q8WWL7 1395 aa13.06□□□□□ -0.32
CHFR-211ENST00000535897 A2MP01023 1474 aa13.05□□□□□ -0.32
CHFR-211ENST00000535897 PLEKHH2Q8IVE3 1493 aa13.05□□□□□ -0.32
CHFR-211ENST00000535897 GGT6Q6P531 493 aa13.05□□□□□ -0.32
CHFR-211ENST00000535897 PLXNC1O60486 1568 aa13.04□□□□□ -0.32
CHFR-211ENST00000535897 ZNF142P52746 1687 aaPredicted RBP13.04□□□□□ -0.32
CHFR-211ENST00000535897 CEP170BQ9Y4F5 1589 aaPredicted RBP13.03□□□□□ -0.32
CHFR-211ENST00000535897 ZNF335Q9H4Z2 1342 aaPredicted RBP13.03□□□□□ -0.32
CHFR-211ENST00000535897 MTUS2Q5JR59 1369 aa13.03□□□□□ -0.32
CHFR-211ENST00000535897 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
CHFR-211ENST00000535897 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.32
CHFR-211ENST00000535897 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.33
CHFR-211ENST00000535897 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
CHFR-211ENST00000535897 PLA2R1Q13018 1463 aa13□□□□□ -0.33
CHFR-211ENST00000535897 PKD2Q13563 968 aa13□□□□□ -0.33
CHFR-211ENST00000535897 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
CHFR-211ENST00000535897 TCOF1Q13428 1488 aaKnown RBP12.97□□□□□ -0.33
CHFR-211ENST00000535897 ZNF644Q9H582 1327 aaPredicted RBP12.97□□□□□ -0.33
CHFR-211ENST00000535897 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
CHFR-211ENST00000535897 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.33
CHFR-211ENST00000535897 EHBP1L1Q8N3D4 1523 aa12.96□□□□□ -0.33
CHFR-211ENST00000535897 A2ML1A8K2U0 1454 aa12.95□□□□□ -0.34
CHFR-211ENST00000535897 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
CHFR-211ENST00000535897 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
CHFR-211ENST00000535897 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
CHFR-211ENST00000535897 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
CHFR-211ENST00000535897 KIF3BO15066 747 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms