RNA–Protein interactions for RNA: ENST00000534992.5

FANCA-204, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-204ENST00000534992 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
FANCA-204ENST00000534992 ARHGEF12Q9NZN5 1544 aa23.59■■□□□ 1.37
FANCA-204ENST00000534992 CEBPAP49715 358 aaPredicted RBP23.56■■□□□ 1.36
FANCA-204ENST00000534992 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
FANCA-204ENST00000534992 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
FANCA-204ENST00000534992 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
FANCA-204ENST00000534992 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
FANCA-204ENST00000534992 ATP10AO60312 1499 aa23.48■■□□□ 1.35
FANCA-204ENST00000534992 PLEKHD1A6NEE1 506 aa23.47■■□□□ 1.35
FANCA-204ENST00000534992 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
FANCA-204ENST00000534992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.45■■□□□ 1.345e-7■■■□□ 18.8
FANCA-204ENST00000534992 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
FANCA-204ENST00000534992 SAMD9Q5K651 1589 aa23.43■■□□□ 1.34
FANCA-204ENST00000534992 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
FANCA-204ENST00000534992 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
FANCA-204ENST00000534992 C3P01024 1663 aa23.39■■□□□ 1.34
FANCA-204ENST00000534992 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
FANCA-204ENST00000534992 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
FANCA-204ENST00000534992 PRXQ9BXM0 1461 aa23.36■■□□□ 1.33
FANCA-204ENST00000534992 PHF23Q9BUL5 403 aaPredicted RBP23.34■■□□□ 1.33
FANCA-204ENST00000534992 MYT1LQ9UL68 1186 aa23.34■■□□□ 1.33
FANCA-204ENST00000534992 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
FANCA-204ENST00000534992 TRAPPC8Q9Y2L5 1435 aa23.3■■□□□ 1.32
FANCA-204ENST00000534992 CAMSAP1Q5T5Y3 1602 aa23.3■■□□□ 1.32
FANCA-204ENST00000534992 ZNF335Q9H4Z2 1342 aaPredicted RBP23.29■■□□□ 1.32
FANCA-204ENST00000534992 ZNF518AQ6AHZ1 1483 aa23.27■■□□□ 1.32
FANCA-204ENST00000534992 MYO5CQ9NQX4 1742 aa23.27■■□□□ 1.32
FANCA-204ENST00000534992 PLCH2O75038 1416 aa23.26■■□□□ 1.31
FANCA-204ENST00000534992 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
FANCA-204ENST00000534992 DIP2CQ9Y2E4 1556 aa23.23■■□□□ 1.31
FANCA-204ENST00000534992 HSPA1LP34931 641 aa23.22■■□□□ 1.31
FANCA-204ENST00000534992 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
FANCA-204ENST00000534992 REREQ9P2R6 1566 aa23.22■■□□□ 1.31
FANCA-204ENST00000534992 PIP4K2BP78356 416 aa23.21■■□□□ 1.31
FANCA-204ENST00000534992 SUPT6HQ7KZ85 1726 aaKnown RBP23.2■■□□□ 1.3
FANCA-204ENST00000534992 KDM5CP41229 1560 aa23.19■■□□□ 1.3
FANCA-204ENST00000534992 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
FANCA-204ENST00000534992 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
FANCA-204ENST00000534992 AGLP35573 1532 aa23.17■■□□□ 1.3
FANCA-204ENST00000534992 ABCA6Q8N139 1617 aa23.16■■□□□ 1.3
FANCA-204ENST00000534992 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
FANCA-204ENST00000534992 ARHGAP5Q13017 1502 aa23.14■■□□□ 1.3
FANCA-204ENST00000534992 TOM1O60784 492 aa23.13■■□□□ 1.29
FANCA-204ENST00000534992 NPATQ14207 1427 aa23.12■■□□□ 1.29
FANCA-204ENST00000534992 AFAP1Q8N556 730 aa23.12■■□□□ 1.29
FANCA-204ENST00000534992 PKD2Q13563 968 aa23.11■■□□□ 1.29
FANCA-204ENST00000534992 MROH2AA6NES4 1674 aa23.1■■□□□ 1.29
FANCA-204ENST00000534992 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
FANCA-204ENST00000534992 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
FANCA-204ENST00000534992 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
FANCA-204ENST00000534992 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.29
FANCA-204ENST00000534992 KIF14Q15058 1648 aa23.07■■□□□ 1.28
FANCA-204ENST00000534992 MLH3Q9UHC1 1453 aa23.05■■□□□ 1.28
FANCA-204ENST00000534992 CEP170BQ9Y4F5 1589 aaPredicted RBP23.04■■□□□ 1.28
FANCA-204ENST00000534992 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
FANCA-204ENST00000534992 CPS1P31327 1500 aa23.03■■□□□ 1.28
FANCA-204ENST00000534992 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
FANCA-204ENST00000534992 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
FANCA-204ENST00000534992 ZMYM3Q14202 1370 aa22.99■■□□□ 1.27
FANCA-204ENST00000534992 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
FANCA-204ENST00000534992 CLTCQ00610 1675 aaKnown RBP22.97■■□□□ 1.27
FANCA-204ENST00000534992 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
FANCA-204ENST00000534992 CLIP1P30622 1438 aa22.95■■□□□ 1.26
FANCA-204ENST00000534992 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
FANCA-204ENST00000534992 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
FANCA-204ENST00000534992 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
FANCA-204ENST00000534992 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
FANCA-204ENST00000534992 ABCC1P33527 1531 aa22.92■■□□□ 1.26
FANCA-204ENST00000534992 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
FANCA-204ENST00000534992 CDC42BPBQ9Y5S2 1711 aa22.91■■□□□ 1.26
FANCA-204ENST00000534992 TROQ12816 1431 aaPredicted RBP22.89■■□□□ 1.25
FANCA-204ENST00000534992 PREX2Q70Z35 1606 aa22.88■■□□□ 1.25
FANCA-204ENST00000534992 A2ML1A8K2U0 1454 aa22.84■■□□□ 1.25
FANCA-204ENST00000534992 DNMT1P26358 1616 aaKnown RBP22.83■■□□□ 1.25
FANCA-204ENST00000534992 FMN1Q68DA7 1419 aa22.82■■□□□ 1.24
FANCA-204ENST00000534992 NEURL4Q96JN8 1562 aa22.81■■□□□ 1.24
FANCA-204ENST00000534992 ALKQ9UM73 1620 aa22.79■■□□□ 1.24
FANCA-204ENST00000534992 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
FANCA-204ENST00000534992 RNF17Q9BXT8 1623 aaKnown RBP22.78■■□□□ 1.24
FANCA-204ENST00000534992 RGS17Q9UGC6 210 aaPredicted RBP22.77■■□□□ 1.24
FANCA-204ENST00000534992 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
FANCA-204ENST00000534992 GGT6Q6P531 493 aa22.76■■□□□ 1.23
FANCA-204ENST00000534992 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
FANCA-204ENST00000534992 ATP7AQ04656 1500 aa22.72■■□□□ 1.23
FANCA-204ENST00000534992 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
FANCA-204ENST00000534992 EEA1Q15075 1411 aa22.71■■□□□ 1.23
FANCA-204ENST00000534992 A2MP01023 1474 aa22.71■■□□□ 1.23
FANCA-204ENST00000534992 SYNMO15061 1565 aa22.71■■□□□ 1.23
FANCA-204ENST00000534992 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
FANCA-204ENST00000534992 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
FANCA-204ENST00000534992 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
FANCA-204ENST00000534992 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
FANCA-204ENST00000534992 SETD1AO15047 1707 aaKnown RBP22.69■■□□□ 1.22
FANCA-204ENST00000534992 LRRIQ1Q96JM4 1722 aa22.68■■□□□ 1.22
FANCA-204ENST00000534992 NPHP4O75161 1426 aaPredicted RBP22.67■■□□□ 1.22
FANCA-204ENST00000534992 TNRQ92752 1358 aa22.66■■□□□ 1.22
FANCA-204ENST00000534992 INO80Q9ULG1 1556 aaPredicted RBP22.66■■□□□ 1.22
FANCA-204ENST00000534992 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.65■■□□□ 1.22
FANCA-204ENST00000534992 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
FANCA-204ENST00000534992 POTEAQ6S8J7 498 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms