RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 MPHOSPH9Q99550 1183 aa26.55■■□□□ 1.84
COPS7A-204ENST00000534947 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
COPS7A-204ENST00000534947 ADGBQ8N7X0 1667 aa26.54■■□□□ 1.84
COPS7A-204ENST00000534947 ARID3CA6NKF2 412 aa26.51■■□□□ 1.83
COPS7A-204ENST00000534947 PLB1Q6P1J6 1458 aa26.51■■□□□ 1.83
COPS7A-204ENST00000534947 CAMSAP2Q08AD1 1489 aa26.51■■□□□ 1.83
COPS7A-204ENST00000534947 ANP32CO43423 234 aa26.49■■□□□ 1.83
COPS7A-204ENST00000534947 PRG4Q92954 1404 aaPredicted RBP26.49■■□□□ 1.83
COPS7A-204ENST00000534947 CROCC2H7BZ55 1655 aa26.49■■□□□ 1.83
COPS7A-204ENST00000534947 GPATCH8Q9UKJ3 1502 aaKnown RBP26.49■■□□□ 1.83
COPS7A-204ENST00000534947 ADGRL2O95490 1459 aa26.48■■□□□ 1.83
COPS7A-204ENST00000534947 ABCA8O94911 1581 aa26.48■■□□□ 1.83
COPS7A-204ENST00000534947 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
COPS7A-204ENST00000534947 RPRD2Q5VT52 1461 aaKnown RBP26.47■■□□□ 1.83
COPS7A-204ENST00000534947 ANKRD30BQ9BXX2 1392 aa26.47■■□□□ 1.83
COPS7A-204ENST00000534947 KIF14Q15058 1648 aa26.45■■□□□ 1.82
COPS7A-204ENST00000534947 KCNH8Q96L42 1107 aa26.44■■□□□ 1.82
COPS7A-204ENST00000534947 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
COPS7A-204ENST00000534947 ZNF644Q9H582 1327 aaPredicted RBP26.42■■□□□ 1.82
COPS7A-204ENST00000534947 CFDP1Q9UEE9 299 aaPredicted RBP26.42■■□□□ 1.82
COPS7A-204ENST00000534947 NCOA1Q15788 1441 aa26.41■■□□□ 1.82
COPS7A-204ENST00000534947 SUPT16HQ9Y5B9 1047 aaKnown RBP26.39■■□□□ 1.82
COPS7A-204ENST00000534947 TEX14Q8IWB6 1497 aa26.39■■□□□ 1.81
COPS7A-204ENST00000534947 SHANK2Q9UPX8 1470 aa26.37■■□□□ 1.81
COPS7A-204ENST00000534947 CDC42BPAQ5VT25 1732 aa26.36■■□□□ 1.81
COPS7A-204ENST00000534947 FBLN2P98095 1184 aa26.36■■□□□ 1.81
COPS7A-204ENST00000534947 ABCC10Q5T3U5 1492 aa26.35■■□□□ 1.81
COPS7A-204ENST00000534947 EIF4G2P78344 907 aaKnown RBP eCLIP26.35■■□□□ 1.81
COPS7A-204ENST00000534947 PZPP20742 1482 aa26.35■■□□□ 1.81
COPS7A-204ENST00000534947 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
COPS7A-204ENST00000534947 ATP10BO94823 1461 aa26.33■■□□□ 1.8
COPS7A-204ENST00000534947 ANKRD30AQ9BXX3 1397 aa26.33■■□□□ 1.8
COPS7A-204ENST00000534947 HSPA5P11021 654 aaKnown RBP26.32■■□□□ 1.8
COPS7A-204ENST00000534947 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
COPS7A-204ENST00000534947 PLEKHD1A6NEE1 506 aa26.31■■□□□ 1.8
COPS7A-204ENST00000534947 POLR1AO95602 1720 aaPredicted RBP26.28■■□□□ 1.8
COPS7A-204ENST00000534947 WASHC2AQ641Q2 1341 aa26.27■■□□□ 1.8
COPS7A-204ENST00000534947 KIAA1107Q9UPP5 1409 aa26.26■■□□□ 1.79
COPS7A-204ENST00000534947 ARHGEF5Q12774 1597 aa26.25■■□□□ 1.79
COPS7A-204ENST00000534947 FOXD1Q16676 465 aa26.24■■□□□ 1.79
COPS7A-204ENST00000534947 CNTLNQ9NXG0 1405 aa26.23■■□□□ 1.79
COPS7A-204ENST00000534947 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
COPS7A-204ENST00000534947 KDM5DQ9BY66 1539 aa26.22■■□□□ 1.79
COPS7A-204ENST00000534947 MBD5Q9P267 1494 aa26.21■■□□□ 1.79
COPS7A-204ENST00000534947 C9orf84Q5VXU9 1444 aa26.2■■□□□ 1.78
COPS7A-204ENST00000534947 SPATA31E1Q6ZUB1 1445 aa26.2■■□□□ 1.78
COPS7A-204ENST00000534947 PTPRGP23470 1445 aa26.18■■□□□ 1.78
COPS7A-204ENST00000534947 ZNF777Q9ULD5 760 aaPredicted RBP26.18■■□□□ 1.78
COPS7A-204ENST00000534947 CCDC7Q96M83 1385 aa26.17■■□□□ 1.78
COPS7A-204ENST00000534947 SHROOM2Q13796 1616 aa26.17■■□□□ 1.78
COPS7A-204ENST00000534947 NBPF8Q3BBV2 869 aa26.15■■□□□ 1.78
COPS7A-204ENST00000534947 PREX2Q70Z35 1606 aa26.15■■□□□ 1.78
COPS7A-204ENST00000534947 CHD1O14646 1710 aa26.15■■□□□ 1.78
COPS7A-204ENST00000534947 ARHGEF12Q9NZN5 1544 aa26.09■■□□□ 1.77
COPS7A-204ENST00000534947 CDC42BPBQ9Y5S2 1711 aa26.09■■□□□ 1.77
COPS7A-204ENST00000534947 TSPY4P0CV99 314 aa26.09■■□□□ 1.77
COPS7A-204ENST00000534947 TSPY10P0CW01 314 aa26.09■■□□□ 1.77
COPS7A-204ENST00000534947 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
COPS7A-204ENST00000534947 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.76
COPS7A-204ENST00000534947 PKD2Q13563 968 aa26.07■■□□□ 1.76
COPS7A-204ENST00000534947 UHRF1BP1Q6BDS2 1440 aa26.07■■□□□ 1.76
COPS7A-204ENST00000534947 SAMD9LQ8IVG5 1584 aa26.07■■□□□ 1.76
COPS7A-204ENST00000534947 MAST1Q9Y2H9 1570 aa26.04■■□□□ 1.76
COPS7A-204ENST00000534947 NUP155O75694 1391 aa26.03■■□□□ 1.76
COPS7A-204ENST00000534947 KIF15Q9NS87 1388 aa26.03■■□□□ 1.76
COPS7A-204ENST00000534947 C11orf95C9JLR9 678 aaPredicted RBP26.02■■□□□ 1.76
COPS7A-204ENST00000534947 NEFLP07196 543 aa26.02■■□□□ 1.76
COPS7A-204ENST00000534947 ARID4BQ4LE39 1312 aaPredicted RBP26.01■■□□□ 1.75
COPS7A-204ENST00000534947 KIF7Q2M1P5 1343 aa26■■□□□ 1.75
COPS7A-204ENST00000534947 RALGAPBQ86X10 1494 aa25.99■■□□□ 1.75
COPS7A-204ENST00000534947 KDM5CP41229 1560 aa25.99■■□□□ 1.75
COPS7A-204ENST00000534947 ABCC2Q92887 1545 aa25.99■■□□□ 1.75
COPS7A-204ENST00000534947 PRKRIP1Q9H875 184 aaPredicted RBP25.98■■□□□ 1.75
COPS7A-204ENST00000534947 FKBP8Q14318 412 aa25.98■■□□□ 1.75
COPS7A-204ENST00000534947 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
COPS7A-204ENST00000534947 USP47Q96K76 1375 aa25.95■■□□□ 1.74
COPS7A-204ENST00000534947 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
COPS7A-204ENST00000534947 HNRNPMP52272 730 aaKnown RBP eCLIP25.93■■□□□ 1.74
COPS7A-204ENST00000534947 TTC37Q6PGP7 1564 aa25.93■■□□□ 1.74
COPS7A-204ENST00000534947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.93■■□□□ 1.74
COPS7A-204ENST00000534947 UNC13BO14795 1591 aa25.93■■□□□ 1.74
COPS7A-204ENST00000534947 PLXNC1O60486 1568 aa25.93■■□□□ 1.74
COPS7A-204ENST00000534947 HNRNPUQ00839 825 aaKnown RBP eCLIP25.92■■□□□ 1.74
COPS7A-204ENST00000534947 FAM135AQ9P2D6 1515 aa25.92■■□□□ 1.74
COPS7A-204ENST00000534947 BCORL1Q5H9F3 1711 aa25.9■■□□□ 1.74
COPS7A-204ENST00000534947 ARHGAP5Q13017 1502 aa25.9■■□□□ 1.74
COPS7A-204ENST00000534947 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
COPS7A-204ENST00000534947 ROCK2O75116 1388 aaKnown RBP25.88■■□□□ 1.73
COPS7A-204ENST00000534947 UHRF1BP1LA0JNW5 1464 aa25.86■■□□□ 1.73
COPS7A-204ENST00000534947 CLASP1Q7Z460 1538 aa25.84■■□□□ 1.73
COPS7A-204ENST00000534947 DHX29Q7Z478 1369 aaKnown RBP25.83■■□□□ 1.73
COPS7A-204ENST00000534947 IQGAP3Q86VI3 1631 aa25.83■■□□□ 1.73
COPS7A-204ENST00000534947 TSHZ2Q9NRE2 1034 aa25.81■■□□□ 1.72
COPS7A-204ENST00000534947 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
COPS7A-204ENST00000534947 MRS2Q9HD23 443 aa25.8■■□□□ 1.72
COPS7A-204ENST00000534947 DUOX2Q9NRD8 1548 aa25.79■■□□□ 1.72
COPS7A-204ENST00000534947 ZCCHC11Q5TAX3 1644 aaKnown RBP25.78■■□□□ 1.72
COPS7A-204ENST00000534947 CCDC184Q52MB2 194 aa25.78■■□□□ 1.72
COPS7A-204ENST00000534947 MAGI2Q86UL8 1455 aa25.78■■□□□ 1.72
COPS7A-204ENST00000534947 ZBED9Q6R2W3 1325 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms