RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
TNC-209ENST00000534839 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.56
TNC-209ENST00000534839 ARAP3Q8WWN8 1544 aa18.52■□□□□ 0.56
TNC-209ENST00000534839 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
TNC-209ENST00000534839 FKBP8Q14318 412 aa18.48■□□□□ 0.55
TNC-209ENST00000534839 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
TNC-209ENST00000534839 KCNH8Q96L42 1107 aa18.46■□□□□ 0.55
TNC-209ENST00000534839 YEATS2Q9ULM3 1422 aa18.45■□□□□ 0.54
TNC-209ENST00000534839 SSUH2Q9Y2M2 353 aa18.44■□□□□ 0.54
TNC-209ENST00000534839 STRCQ7RTU9 1775 aa18.42■□□□□ 0.54
TNC-209ENST00000534839 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
TNC-209ENST00000534839 LTBP4Q8N2S1 1624 aa18.39■□□□□ 0.53
TNC-209ENST00000534839 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
TNC-209ENST00000534839 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
TNC-209ENST00000534839 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
TNC-209ENST00000534839 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
TNC-209ENST00000534839 IGF1RP08069 1367 aa18.34■□□□□ 0.53
TNC-209ENST00000534839 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
TNC-209ENST00000534839 FRMPD1Q5SYB0 1578 aa18.31■□□□□ 0.52
TNC-209ENST00000534839 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
TNC-209ENST00000534839 PTPRTO14522 1441 aa18.31■□□□□ 0.52
TNC-209ENST00000534839 PHLDB1Q86UU1 1377 aa18.3■□□□□ 0.52
TNC-209ENST00000534839 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
TNC-209ENST00000534839 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
TNC-209ENST00000534839 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
TNC-209ENST00000534839 REM2Q8IYK8 340 aaPredicted RBP18.25■□□□□ 0.51
TNC-209ENST00000534839 POGZQ7Z3K3 1410 aa18.24■□□□□ 0.51
TNC-209ENST00000534839 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
TNC-209ENST00000534839 MLECQ14165 292 aa18.22■□□□□ 0.51
TNC-209ENST00000534839 FANCAO15360 1455 aa18.21■□□□□ 0.51
TNC-209ENST00000534839 PROM2Q8N271 834 aa18.21■□□□□ 0.51
TNC-209ENST00000534839 FER1L4A9Z1Z3 1794 aa18.21■□□□□ 0.51
TNC-209ENST00000534839 CEBPAP49715 358 aaPredicted RBP18.2■□□□□ 0.5
TNC-209ENST00000534839 NEO1Q92859 1461 aa18.2■□□□□ 0.5
TNC-209ENST00000534839 KIAA0556O60303 1618 aa18.2■□□□□ 0.5
TNC-209ENST00000534839 HSPA1LP34931 641 aa18.19■□□□□ 0.5
TNC-209ENST00000534839 UGGT2Q9NYU1 1516 aa18.17■□□□□ 0.5
TNC-209ENST00000534839 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
TNC-209ENST00000534839 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
TNC-209ENST00000534839 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
TNC-209ENST00000534839 AKNAQ7Z591 1439 aa18.14■□□□□ 0.49
TNC-209ENST00000534839 ABCA8O94911 1581 aa18.13■□□□□ 0.49
TNC-209ENST00000534839 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
TNC-209ENST00000534839 RICTORQ6R327 1708 aa18.09■□□□□ 0.49
TNC-209ENST00000534839 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
TNC-209ENST00000534839 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
TNC-209ENST00000534839 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
TNC-209ENST00000534839 PITPNM1O00562 1244 aa18.05■□□□□ 0.48
TNC-209ENST00000534839 FHOD3Q2V2M9 1422 aa18.05■□□□□ 0.48
TNC-209ENST00000534839 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
TNC-209ENST00000534839 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
TNC-209ENST00000534839 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
TNC-209ENST00000534839 PIP4K2BP78356 416 aa18.03■□□□□ 0.48
TNC-209ENST00000534839 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
TNC-209ENST00000534839 ZMYM4Q5VZL5 1548 aa18.01■□□□□ 0.47
TNC-209ENST00000534839 SPDYE1Q8NFV5 336 aaPredicted RBP17.99■□□□□ 0.47
TNC-209ENST00000534839 RGS17Q9UGC6 210 aaPredicted RBP17.99■□□□□ 0.47
TNC-209ENST00000534839 ATP10BO94823 1461 aa17.99■□□□□ 0.47
TNC-209ENST00000534839 SETD1BQ9UPS6 1966 aaKnown RBP17.97■□□□□ 0.47
TNC-209ENST00000534839 CLEC11AQ9Y240 323 aa17.97■□□□□ 0.47
TNC-209ENST00000534839 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
TNC-209ENST00000534839 HECW1Q76N89 1606 aa17.92■□□□□ 0.46
TNC-209ENST00000534839 NCKAP5LQ9HCH0 1330 aa17.92■□□□□ 0.46
TNC-209ENST00000534839 TOM1O60784 492 aa17.91■□□□□ 0.46
TNC-209ENST00000534839 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
TNC-209ENST00000534839 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
TNC-209ENST00000534839 C3P01024 1663 aa17.88■□□□□ 0.45
TNC-209ENST00000534839 ATP10AO60312 1499 aa17.88■□□□□ 0.45
TNC-209ENST00000534839 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
TNC-209ENST00000534839 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
TNC-209ENST00000534839 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
TNC-209ENST00000534839 POTEAQ6S8J7 498 aa17.83■□□□□ 0.44
TNC-209ENST00000534839 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
TNC-209ENST00000534839 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
TNC-209ENST00000534839 STAG3Q9UJ98 1225 aa17.82■□□□□ 0.44
TNC-209ENST00000534839 ALKQ9UM73 1620 aa17.78■□□□□ 0.44
TNC-209ENST00000534839 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
TNC-209ENST00000534839 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
TNC-209ENST00000534839 PKD2Q13563 968 aa17.75■□□□□ 0.43
TNC-209ENST00000534839 SCAPERQ9BY12 1400 aa17.74■□□□□ 0.43
TNC-209ENST00000534839 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
TNC-209ENST00000534839 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
TNC-209ENST00000534839 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
TNC-209ENST00000534839 CPS1P31327 1500 aa17.71■□□□□ 0.43
TNC-209ENST00000534839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.71■□□□□ 0.43
TNC-209ENST00000534839 PTPRKQ15262 1439 aa17.71■□□□□ 0.43
TNC-209ENST00000534839 PLA2R1Q13018 1463 aa17.7■□□□□ 0.42
TNC-209ENST00000534839 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
TNC-209ENST00000534839 P3H3Q8IVL6 736 aa17.69■□□□□ 0.42
TNC-209ENST00000534839 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
TNC-209ENST00000534839 ESF1Q9H501 851 aaKnown RBP17.69■□□□□ 0.42
TNC-209ENST00000534839 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
TNC-209ENST00000534839 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
TNC-209ENST00000534839 SHANK2Q9UPX8 1470 aa17.65■□□□□ 0.42
TNC-209ENST00000534839 RAPGEF6Q8TEU7 1601 aa17.65■□□□□ 0.42
TNC-209ENST00000534839 NPATQ14207 1427 aa17.64■□□□□ 0.42
TNC-209ENST00000534839 SRCAPQ6ZRS2 3230 aa17.63■□□□□ 0.41
TNC-209ENST00000534839 PLEKHD1A6NEE1 506 aa17.62■□□□□ 0.41
TNC-209ENST00000534839 SUPT5HO00267 1087 aaKnown RBP17.62■□□□□ 0.41
TNC-209ENST00000534839 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms