RNA–Protein interactions for RNA: ENST00000534637.5

SNX15-207, Transcript of sorting nexin 15, humanhuman

TSL 5

Gene SNX15, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-207ENST00000534637 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
SNX15-207ENST00000534637 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
SNX15-207ENST00000534637 CEBPAP49715 358 aaPredicted RBP24.03■■□□□ 1.44
SNX15-207ENST00000534637 RAPGEF6Q8TEU7 1601 aa24■■□□□ 1.43
SNX15-207ENST00000534637 UBAP1LF5GYI3 381 aa24■■□□□ 1.43
SNX15-207ENST00000534637 C9orf84Q5VXU9 1444 aa24■■□□□ 1.43
SNX15-207ENST00000534637 NCOA1Q15788 1441 aa23.99■■□□□ 1.43
SNX15-207ENST00000534637 ATP10AO60312 1499 aa23.98■■□□□ 1.43
SNX15-207ENST00000534637 C3P01024 1663 aa23.97■■□□□ 1.43
SNX15-207ENST00000534637 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNX15-207ENST00000534637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
SNX15-207ENST00000534637 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.41
SNX15-207ENST00000534637 NUP153P49790 1475 aaKnown RBP23.86■■□□□ 1.41
SNX15-207ENST00000534637 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
SNX15-207ENST00000534637 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
SNX15-207ENST00000534637 SAMD9Q5K651 1589 aa23.84■■□□□ 1.41
SNX15-207ENST00000534637 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
SNX15-207ENST00000534637 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
SNX15-207ENST00000534637 SCAPERQ9BY12 1400 aa23.83■■□□□ 1.4
SNX15-207ENST00000534637 HSPA1LP34931 641 aa23.82■■□□□ 1.4
SNX15-207ENST00000534637 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
SNX15-207ENST00000534637 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
SNX15-207ENST00000534637 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
SNX15-207ENST00000534637 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
SNX15-207ENST00000534637 AGLP35573 1532 aa23.73■■□□□ 1.39
SNX15-207ENST00000534637 DIP2CQ9Y2E4 1556 aa23.73■■□□□ 1.39
SNX15-207ENST00000534637 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
SNX15-207ENST00000534637 KDM5CP41229 1560 aa23.72■■□□□ 1.39
SNX15-207ENST00000534637 ZNF518AQ6AHZ1 1483 aa23.71■■□□□ 1.39
SNX15-207ENST00000534637 PLCH2O75038 1416 aa23.71■■□□□ 1.39
SNX15-207ENST00000534637 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
SNX15-207ENST00000534637 PLA2R1Q13018 1463 aa23.7■■□□□ 1.38
SNX15-207ENST00000534637 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.38
SNX15-207ENST00000534637 MYO5CQ9NQX4 1742 aa23.68■■□□□ 1.38
SNX15-207ENST00000534637 MROH2AA6NES4 1674 aa23.68■■□□□ 1.38
SNX15-207ENST00000534637 NPATQ14207 1427 aa23.67■■□□□ 1.38
SNX15-207ENST00000534637 CNTLNQ9NXG0 1405 aa23.67■■□□□ 1.38
SNX15-207ENST00000534637 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
SNX15-207ENST00000534637 TOM1O60784 492 aa23.67■■□□□ 1.38
SNX15-207ENST00000534637 ESF1Q9H501 851 aaKnown RBP23.67■■□□□ 1.38
SNX15-207ENST00000534637 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
SNX15-207ENST00000534637 TCOF1Q13428 1488 aaKnown RBP23.65■■□□□ 1.38
SNX15-207ENST00000534637 PKD2Q13563 968 aa23.65■■□□□ 1.38
SNX15-207ENST00000534637 ABCA6Q8N139 1617 aa23.65■■□□□ 1.38
SNX15-207ENST00000534637 CPS1P31327 1500 aa23.62■■□□□ 1.37
SNX15-207ENST00000534637 MYO3AQ8NEV4 1616 aa23.61■■□□□ 1.37
SNX15-207ENST00000534637 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
SNX15-207ENST00000534637 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
SNX15-207ENST00000534637 PPP6R1Q9UPN7 881 aa23.56■■□□□ 1.36
SNX15-207ENST00000534637 MLH3Q9UHC1 1453 aa23.55■■□□□ 1.36
SNX15-207ENST00000534637 CSRNP3Q8WYN3 585 aa23.54■■□□□ 1.36
SNX15-207ENST00000534637 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
SNX15-207ENST00000534637 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
SNX15-207ENST00000534637 AFAP1Q8N556 730 aa23.51■■□□□ 1.35
SNX15-207ENST00000534637 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
SNX15-207ENST00000534637 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
SNX15-207ENST00000534637 RGS17Q9UGC6 210 aaPredicted RBP23.49■■□□□ 1.35
SNX15-207ENST00000534637 CDK13Q14004 1512 aaKnown RBP23.48■■□□□ 1.35
SNX15-207ENST00000534637 SHANK2Q9UPX8 1470 aa23.47■■□□□ 1.35
SNX15-207ENST00000534637 ZMYM3Q14202 1370 aa23.46■■□□□ 1.35
SNX15-207ENST00000534637 ARHGAP5Q13017 1502 aa23.45■■□□□ 1.34
SNX15-207ENST00000534637 KIDINS220Q9ULH0 1771 aa23.43■■□□□ 1.34
SNX15-207ENST00000534637 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
SNX15-207ENST00000534637 RANGAP1P46060 587 aaPredicted RBP23.42■■□□□ 1.34
SNX15-207ENST00000534637 EEA1Q15075 1411 aa23.41■■□□□ 1.34
SNX15-207ENST00000534637 NEURL4Q96JN8 1562 aa23.4■■□□□ 1.34
SNX15-207ENST00000534637 KIF14Q15058 1648 aa23.4■■□□□ 1.34
SNX15-207ENST00000534637 ITSN2Q9NZM3 1697 aa23.39■■□□□ 1.34
SNX15-207ENST00000534637 DNMT1P26358 1616 aaKnown RBP23.38■■□□□ 1.33
SNX15-207ENST00000534637 CDC42BPBQ9Y5S2 1711 aa23.37■■□□□ 1.33
SNX15-207ENST00000534637 VWDEQ8N2E2 1590 aa23.37■■□□□ 1.33
SNX15-207ENST00000534637 ABCC1P33527 1531 aa23.35■■□□□ 1.33
SNX15-207ENST00000534637 RNF17Q9BXT8 1623 aaKnown RBP23.35■■□□□ 1.33
SNX15-207ENST00000534637 SETD1AO15047 1707 aaKnown RBP23.35■■□□□ 1.33
SNX15-207ENST00000534637 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
SNX15-207ENST00000534637 POTEAQ6S8J7 498 aa23.29■■□□□ 1.32
SNX15-207ENST00000534637 SYNMO15061 1565 aa23.28■■□□□ 1.32
SNX15-207ENST00000534637 PREX2Q70Z35 1606 aa23.28■■□□□ 1.32
SNX15-207ENST00000534637 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
SNX15-207ENST00000534637 SRCAPQ6ZRS2 3230 aa23.25■■□□□ 1.31
SNX15-207ENST00000534637 CDK11AQ9UQ88 783 aaPredicted RBP23.24■■□□□ 1.31
SNX15-207ENST00000534637 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
SNX15-207ENST00000534637 STRCP1A6NGW2 1772 aa23.23■■□□□ 1.31
SNX15-207ENST00000534637 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
SNX15-207ENST00000534637 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
SNX15-207ENST00000534637 CLIP1P30622 1438 aa23.21■■□□□ 1.31
SNX15-207ENST00000534637 SAMD9LQ8IVG5 1584 aa23.21■■□□□ 1.31
SNX15-207ENST00000534637 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
SNX15-207ENST00000534637 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
SNX15-207ENST00000534637 MED14O60244 1454 aa23.18■■□□□ 1.3
SNX15-207ENST00000534637 IQGAP1P46940 1657 aa23.18■■□□□ 1.3
SNX15-207ENST00000534637 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
SNX15-207ENST00000534637 ANKLE2Q86XL3 938 aa23.13■■□□□ 1.29
SNX15-207ENST00000534637 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
SNX15-207ENST00000534637 ATP7AQ04656 1500 aa23.11■■□□□ 1.29
SNX15-207ENST00000534637 A2MP01023 1474 aa23.1■■□□□ 1.29
SNX15-207ENST00000534637 INO80Q9ULG1 1556 aaPredicted RBP23.1■■□□□ 1.29
SNX15-207ENST00000534637 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
SNX15-207ENST00000534637 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
SNX15-207ENST00000534637 UPF1Q92900 1129 aaKnown RBP eCLIP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms