RNA–Protein interactions for RNA: ENST00000533690.5

ATM-221, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 3,354 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-221ENST00000533690 PTPRGP23470 1445 aa5.99□□□□□ -1.45
ATM-221ENST00000533690 IFT172Q9UG01 1749 aa5.98□□□□□ -1.45
ATM-221ENST00000533690 CDC42BPBQ9Y5S2 1711 aa5.98□□□□□ -1.45
ATM-221ENST00000533690 NUP160Q12769 1436 aa5.98□□□□□ -1.45
ATM-221ENST00000533690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.98□□□□□ -1.45
ATM-221ENST00000533690 NUP153P49790 1475 aaKnown RBP5.98□□□□□ -1.45
ATM-221ENST00000533690 ZMYM4Q5VZL5 1548 aa5.98□□□□□ -1.45
ATM-221ENST00000533690 MYO5CQ9NQX4 1742 aa5.98□□□□□ -1.45
ATM-221ENST00000533690 IFT140Q96RY7 1462 aa5.97□□□□□ -1.45
ATM-221ENST00000533690 TRPM1Q7Z4N2 1603 aa5.97□□□□□ -1.45
ATM-221ENST00000533690 RTN4Q9NQC3 1192 aaKnown RBP5.96□□□□□ -1.46
ATM-221ENST00000533690 IQGAP3Q86VI3 1631 aa5.96□□□□□ -1.46
ATM-221ENST00000533690 PZPP20742 1482 aa5.96□□□□□ -1.46
ATM-221ENST00000533690 FAM9AQ8IZU1 332 aaPredicted RBP5.96□□□□□ -1.46
ATM-221ENST00000533690 MAGI1Q96QZ7 1491 aaPredicted RBP5.95□□□□□ -1.46
ATM-221ENST00000533690 UHRF1BP1Q6BDS2 1440 aa5.95□□□□□ -1.46
ATM-221ENST00000533690 KIAA0586Q9BVV6 1533 aa5.95□□□□□ -1.46
ATM-221ENST00000533690 DIEXFQ68CQ4 756 aaKnown RBP5.95□□□□□ -1.46
ATM-221ENST00000533690 FHOD3Q2V2M9 1422 aa5.95□□□□□ -1.46
ATM-221ENST00000533690 PPP1R15AO75807 674 aaPredicted RBP5.94□□□□□ -1.46
ATM-221ENST00000533690 SLC4A1APQ9BWU0 796 aaKnown RBP5.94□□□□□ -1.46
ATM-221ENST00000533690 VWDEQ8N2E2 1590 aa5.94□□□□□ -1.46
ATM-221ENST00000533690 KIAA1210Q9ULL0 1709 aa5.94□□□□□ -1.46
ATM-221ENST00000533690 IQGAP1P46940 1657 aa5.94□□□□□ -1.46
ATM-221ENST00000533690 RPRD2Q5VT52 1461 aaKnown RBP5.94□□□□□ -1.46
ATM-221ENST00000533690 ZC3H13Q5T200 1668 aaKnown RBP5.94□□□□□ -1.46
ATM-221ENST00000533690 MYO3AQ8NEV4 1616 aa5.93□□□□□ -1.46
ATM-221ENST00000533690 GRIN2AQ12879 1464 aa5.93□□□□□ -1.46
ATM-221ENST00000533690 PDS5BQ9NTI5 1447 aa5.92□□□□□ -1.46
ATM-221ENST00000533690 MYOM1P52179 1685 aa5.92□□□□□ -1.46
ATM-221ENST00000533690 ARAP3Q8WWN8 1544 aa5.92□□□□□ -1.46
ATM-221ENST00000533690 NPM3O75607 178 aaKnown RBP5.92□□□□□ -1.46
ATM-221ENST00000533690 CLASP1Q7Z460 1538 aa5.92□□□□□ -1.46
ATM-221ENST00000533690 NCOA1Q15788 1441 aa5.92□□□□□ -1.46
ATM-221ENST00000533690 PPRC1Q5VV67 1664 aaKnown RBP5.92□□□□□ -1.46
ATM-221ENST00000533690 CEP152O94986 1710 aa5.91□□□□□ -1.46
ATM-221ENST00000533690 SYNJ2O15056 1496 aa5.91□□□□□ -1.46
ATM-221ENST00000533690 ATP10AO60312 1499 aa5.91□□□□□ -1.46
ATM-221ENST00000533690 SAMD9LQ8IVG5 1584 aa5.91□□□□□ -1.46
ATM-221ENST00000533690 SPHKAPQ2M3C7 1700 aa5.9□□□□□ -1.46
ATM-221ENST00000533690 DAPK1P53355 1430 aa5.9□□□□□ -1.46
ATM-221ENST00000533690 CDK13Q14004 1512 aaKnown RBP5.9□□□□□ -1.47
ATM-221ENST00000533690 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
ATM-221ENST00000533690 ABCC5O15440 1437 aa5.89□□□□□ -1.47
ATM-221ENST00000533690 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
ATM-221ENST00000533690 CHD1O14646 1710 aa5.89□□□□□ -1.47
ATM-221ENST00000533690 MIER1Q8N108 512 aa5.89□□□□□ -1.47
ATM-221ENST00000533690 ABCA9Q8IUA7 1624 aa5.88□□□□□ -1.47
ATM-221ENST00000533690 CCER1Q8TC90 406 aaPredicted RBP5.88□□□□□ -1.47
ATM-221ENST00000533690 MROH1Q8NDA8 1641 aa5.88□□□□□ -1.47
ATM-221ENST00000533690 CAMSAP2Q08AD1 1489 aa5.87□□□□□ -1.47
ATM-221ENST00000533690 INSRP06213 1382 aa5.87□□□□□ -1.47
ATM-221ENST00000533690 INO80Q9ULG1 1556 aaPredicted RBP5.87□□□□□ -1.47
ATM-221ENST00000533690 RALGAPBQ86X10 1494 aa5.87□□□□□ -1.47
ATM-221ENST00000533690 VIRMAQ69YN4 1812 aaKnown RBP5.87□□□□□ -1.47
ATM-221ENST00000533690 ZNF608Q9ULD9 1512 aaPredicted RBP5.87□□□□□ -1.47
ATM-221ENST00000533690 ANKRD30BQ9BXX2 1392 aa5.87□□□□□ -1.47
ATM-221ENST00000533690 ARXQ96QS3 562 aa5.87□□□□□ -1.47
ATM-221ENST00000533690 GPATCH8Q9UKJ3 1502 aaKnown RBP5.87□□□□□ -1.47
ATM-221ENST00000533690 DUOX2Q9NRD8 1548 aa5.86□□□□□ -1.47
ATM-221ENST00000533690 MYT1Q01538 1121 aa5.86□□□□□ -1.47
ATM-221ENST00000533690 USP32Q8NFA0 1604 aa5.85□□□□□ -1.47
ATM-221ENST00000533690 MADDQ8WXG6 1647 aa5.85□□□□□ -1.47
ATM-221ENST00000533690 UHRF1BP1LA0JNW5 1464 aa5.85□□□□□ -1.47
ATM-221ENST00000533690 TTC37Q6PGP7 1564 aa5.84□□□□□ -1.47
ATM-221ENST00000533690 CCER2I3L3R5 266 aa5.84□□□□□ -1.47
ATM-221ENST00000533690 UBTFP17480 764 aaKnown RBP5.83□□□□□ -1.48
ATM-221ENST00000533690 DHX29Q7Z478 1369 aaKnown RBP5.83□□□□□ -1.48
ATM-221ENST00000533690 WDR7Q9Y4E6 1490 aa5.83□□□□□ -1.48
ATM-221ENST00000533690 ABCA6Q8N139 1617 aa5.83□□□□□ -1.48
ATM-221ENST00000533690 TROQ12816 1431 aaPredicted RBP5.83□□□□□ -1.48
ATM-221ENST00000533690 PIK3C2BO00750 1634 aa5.82□□□□□ -1.48
ATM-221ENST00000533690 CNTLNQ9NXG0 1405 aa5.82□□□□□ -1.48
ATM-221ENST00000533690 RNF123Q5XPI4 1314 aa5.82□□□□□ -1.48
ATM-221ENST00000533690 SYNMO15061 1565 aa5.82□□□□□ -1.48
ATM-221ENST00000533690 GTF3C3Q9Y5Q9 886 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 DMRT2Q9Y5R5 561 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
ATM-221ENST00000533690 ABCC1P33527 1531 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 ZBTB22O15209 634 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 ABCC2Q92887 1545 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 GPRASP1Q5JY77 1395 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 CNKSR2Q8WXI2 1034 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 NRXN1Q9ULB1 1477 aa5.81□□□□□ -1.48
ATM-221ENST00000533690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.81□□□□□ -1.48
ATM-221ENST00000533690 TET3O43151 1660 aa5.8□□□□□ -1.48
ATM-221ENST00000533690 LMTK2Q8IWU2 1503 aa5.8□□□□□ -1.48
ATM-221ENST00000533690 ZNF518AQ6AHZ1 1483 aa5.79□□□□□ -1.48
ATM-221ENST00000533690 SHPRHQ149N8 1683 aa5.79□□□□□ -1.48
ATM-221ENST00000533690 ERICH6Q7L0X2 663 aa5.79□□□□□ -1.48
ATM-221ENST00000533690 SUPT16HQ9Y5B9 1047 aaKnown RBP5.79□□□□□ -1.48
ATM-221ENST00000533690 TRPM2O94759 1503 aa5.79□□□□□ -1.48
ATM-221ENST00000533690 CENPBP07199 599 aaPredicted RBP5.78□□□□□ -1.48
ATM-221ENST00000533690 PLA2R1Q13018 1463 aa5.78□□□□□ -1.48
ATM-221ENST00000533690 MROH2AA6NES4 1674 aa5.78□□□□□ -1.48
ATM-221ENST00000533690 ZFYVE16Q7Z3T8 1539 aa5.78□□□□□ -1.48
ATM-221ENST00000533690 ATP10BO94823 1461 aa5.78□□□□□ -1.48
ATM-221ENST00000533690 CCDC141Q6ZP82 1450 aa5.78□□□□□ -1.48
ATM-221ENST00000533690 LRPPRCP42704 1394 aaKnown RBP5.78□□□□□ -1.48
ATM-221ENST00000533690 FAM135AQ9P2D6 1515 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms