RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 CC2D2AQ9P2K1 1620 aa10.03□□□□□ -0.8
CSRP1-218ENST00000533402 HSCBQ8IWL3 235 aa10.03□□□□□ -0.8
CSRP1-218ENST00000533402 HDGFP51858 240 aaKnown RBP10.03□□□□□ -0.8
CSRP1-218ENST00000533402 DRC7Q8IY82 874 aa10.03□□□□□ -0.8
CSRP1-218ENST00000533402 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.8
CSRP1-218ENST00000533402 RAPGEF2Q9Y4G8 1499 aa10.02□□□□□ -0.8
CSRP1-218ENST00000533402 SETQ01105 290 aaPredicted RBP10.02□□□□□ -0.81
CSRP1-218ENST00000533402 FOXD1Q16676 465 aa10.02□□□□□ -0.81
CSRP1-218ENST00000533402 HIRIP3Q9BW71 556 aaPredicted RBP10.01□□□□□ -0.81
CSRP1-218ENST00000533402 ERICH3Q5RHP9 1530 aa10.01□□□□□ -0.81
CSRP1-218ENST00000533402 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
CSRP1-218ENST00000533402 CFTRP13569 1480 aa10□□□□□ -0.81
CSRP1-218ENST00000533402 VPS8Q8N3P4 1428 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 CASC1Q6TDU7 716 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 FAM13BQ9NYF5 915 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 GBP4Q96PP9 640 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 KIF21BO75037 1637 aa9.99□□□□□ -0.81
CSRP1-218ENST00000533402 AEBP2Q6ZN18 517 aaPredicted RBP9.99□□□□□ -0.81
CSRP1-218ENST00000533402 UBE2Q2Q8WVN8 375 aa9.98□□□□□ -0.81
CSRP1-218ENST00000533402 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
CSRP1-218ENST00000533402 FANCIQ9NVI1 1328 aa9.98□□□□□ -0.81
CSRP1-218ENST00000533402 TMX4Q9H1E5 349 aaPredicted RBP9.97□□□□□ -0.81
CSRP1-218ENST00000533402 SLKQ9H2G2 1235 aaPredicted RBP9.97□□□□□ -0.81
CSRP1-218ENST00000533402 TOP2BQ02880 1626 aa9.97□□□□□ -0.81
CSRP1-218ENST00000533402 PDE4CQ08493 712 aa9.96□□□□□ -0.81
CSRP1-218ENST00000533402 CUL7Q14999 1698 aa9.96□□□□□ -0.81
CSRP1-218ENST00000533402 DNMBPQ6XZF7 1577 aa9.96□□□□□ -0.82
CSRP1-218ENST00000533402 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
CSRP1-218ENST00000533402 ARHGAP35Q9NRY4 1499 aa9.95□□□□□ -0.82
CSRP1-218ENST00000533402 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
CSRP1-218ENST00000533402 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
CSRP1-218ENST00000533402 RSPH4AQ5TD94 716 aa9.94□□□□□ -0.82
CSRP1-218ENST00000533402 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
CSRP1-218ENST00000533402 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
CSRP1-218ENST00000533402 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
CSRP1-218ENST00000533402 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
CSRP1-218ENST00000533402 GOLGA6L4A6NEF3 574 aa9.92□□□□□ -0.82
CSRP1-218ENST00000533402 P3H3Q8IVL6 736 aa9.92□□□□□ -0.82
CSRP1-218ENST00000533402 IFT140Q96RY7 1462 aa9.92□□□□□ -0.82
CSRP1-218ENST00000533402 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
CSRP1-218ENST00000533402 CUX1P39880 1505 aa9.92□□□□□ -0.82
CSRP1-218ENST00000533402 IL27Q8NEV9 243 aa9.91□□□□□ -0.82
CSRP1-218ENST00000533402 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
CSRP1-218ENST00000533402 KANK1Q14678 1352 aa9.91□□□□□ -0.82
CSRP1-218ENST00000533402 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
CSRP1-218ENST00000533402 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
CSRP1-218ENST00000533402 FAM43AQ8N2R8 423 aa9.9□□□□□ -0.82
CSRP1-218ENST00000533402 FTSJ3Q8IY81 847 aaKnown RBP9.9□□□□□ -0.83
CSRP1-218ENST00000533402 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
CSRP1-218ENST00000533402 SYAP1Q96A49 352 aaPredicted RBP9.89□□□□□ -0.83
CSRP1-218ENST00000533402 FGD5Q6ZNL6 1462 aa9.89□□□□□ -0.83
CSRP1-218ENST00000533402 NOC3LQ8WTT2 800 aaKnown RBP9.89□□□□□ -0.83
CSRP1-218ENST00000533402 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
CSRP1-218ENST00000533402 RRP9O43818 475 aaKnown RBP9.88□□□□□ -0.83
CSRP1-218ENST00000533402 NOM1Q5C9Z4 860 aaKnown RBP9.88□□□□□ -0.83
CSRP1-218ENST00000533402 CFDP1Q9UEE9 299 aaPredicted RBP9.88□□□□□ -0.83
CSRP1-218ENST00000533402 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
CSRP1-218ENST00000533402 HTATSF1O43719 755 aaKnown RBP9.88□□□□□ -0.83
CSRP1-218ENST00000533402 CCDC66A2RUB6 948 aa9.87□□□□□ -0.83
CSRP1-218ENST00000533402 TEX35Q5T0J7 233 aa9.87□□□□□ -0.83
CSRP1-218ENST00000533402 WDR97A6NE52 1622 aa9.86□□□□□ -0.83
CSRP1-218ENST00000533402 TPM2P07951 284 aa9.86□□□□□ -0.83
CSRP1-218ENST00000533402 CCER2I3L3R5 266 aa9.86□□□□□ -0.83
CSRP1-218ENST00000533402 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
CSRP1-218ENST00000533402 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
CSRP1-218ENST00000533402 DDX11L8A8MPP1 907 aa9.85□□□□□ -0.83
CSRP1-218ENST00000533402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
CSRP1-218ENST00000533402 BIVM-ERCC5R4GMW8 1640 aa9.84□□□□□ -0.83
CSRP1-218ENST00000533402 GPS2Q13227 327 aa9.84□□□□□ -0.83
CSRP1-218ENST00000533402 BRPF3Q9ULD4 1205 aa9.83□□□□□ -0.84
CSRP1-218ENST00000533402 CFAP53Q96M91 514 aa9.83□□□□□ -0.84
CSRP1-218ENST00000533402 ZMYND15Q9H091 742 aa9.81□□□□□ -0.84
CSRP1-218ENST00000533402 FRAT1Q92837 279 aaPredicted RBP9.81□□□□□ -0.84
CSRP1-218ENST00000533402 KRI1Q8N9T8 703 aaKnown RBP9.81□□□□□ -0.84
CSRP1-218ENST00000533402 PHF14O94880 888 aa9.8□□□□□ -0.84
CSRP1-218ENST00000533402 LMOD2Q6P5Q4 547 aa9.8□□□□□ -0.84
CSRP1-218ENST00000533402 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
CSRP1-218ENST00000533402 TOPBP1Q92547 1522 aa9.8□□□□□ -0.84
CSRP1-218ENST00000533402 CHMP4BQ9H444 224 aaKnown RBP9.8□□□□□ -0.84
CSRP1-218ENST00000533402 TULP1O00294 542 aaPredicted RBP9.8□□□□□ -0.84
CSRP1-218ENST00000533402 TAF3Q5VWG9 929 aa9.79□□□□□ -0.84
CSRP1-218ENST00000533402 HECW1Q76N89 1606 aa9.79□□□□□ -0.84
CSRP1-218ENST00000533402 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
CSRP1-218ENST00000533402 CWC15Q9P013 229 aaKnown RBP9.78□□□□□ -0.84
CSRP1-218ENST00000533402 SKOR2Q2VWA4 1001 aaPredicted RBP9.78□□□□□ -0.84
CSRP1-218ENST00000533402 FYCO1Q9BQS8 1478 aa9.78□□□□□ -0.84
CSRP1-218ENST00000533402 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
CSRP1-218ENST00000533402 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
CSRP1-218ENST00000533402 MAGI1Q96QZ7 1491 aaPredicted RBP9.77□□□□□ -0.84
CSRP1-218ENST00000533402 MCCP23508 829 aa9.77□□□□□ -0.84
CSRP1-218ENST00000533402 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.85
CSRP1-218ENST00000533402 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
CSRP1-218ENST00000533402 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
CSRP1-218ENST00000533402 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
CSRP1-218ENST00000533402 MS4A1P11836 297 aa9.76□□□□□ -0.85
CSRP1-218ENST00000533402 RBM10P98175 930 aaKnown RBP9.76□□□□□ -0.85
CSRP1-218ENST00000533402 KIF21AQ7Z4S6 1674 aa9.76□□□□□ -0.85
CSRP1-218ENST00000533402 TDRD9Q8NDG6 1382 aaKnown RBP9.76□□□□□ -0.85
CSRP1-218ENST00000533402 FGD1P98174 961 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms