RNA–Protein interactions for RNA: ENST00000533316.1

ATG13-220, Transcript of autophagy related 13, humanhuman

TSL 2

Gene ATG13, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-220ENST00000533316 CFAP74Q9C0B2 1584 aa17.05■□□□□ 0.32
ATG13-220ENST00000533316 EFCAB5A4FU69 1503 aa17.03■□□□□ 0.32
ATG13-220ENST00000533316 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
ATG13-220ENST00000533316 PLCH2O75038 1416 aa17.01■□□□□ 0.31
ATG13-220ENST00000533316 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
ATG13-220ENST00000533316 EEA1Q15075 1411 aa16.99■□□□□ 0.31
ATG13-220ENST00000533316 ATP10AO60312 1499 aa16.98■□□□□ 0.31
ATG13-220ENST00000533316 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
ATG13-220ENST00000533316 ARHGEF12Q9NZN5 1544 aa16.96■□□□□ 0.31
ATG13-220ENST00000533316 EFCAB2Q5VUJ9 269 aa16.96■□□□□ 0.31
ATG13-220ENST00000533316 KIF14Q15058 1648 aa16.96■□□□□ 0.3
ATG13-220ENST00000533316 UBTFP17480 764 aaKnown RBP16.95■□□□□ 0.3
ATG13-220ENST00000533316 MYT1LQ9UL68 1186 aa16.95■□□□□ 0.3
ATG13-220ENST00000533316 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
ATG13-220ENST00000533316 MYO5CQ9NQX4 1742 aa16.92■□□□□ 0.3
ATG13-220ENST00000533316 ILDR2Q71H61 639 aa16.91■□□□□ 0.3
ATG13-220ENST00000533316 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
ATG13-220ENST00000533316 STRCQ7RTU9 1775 aa16.9■□□□□ 0.3
ATG13-220ENST00000533316 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
ATG13-220ENST00000533316 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.29
ATG13-220ENST00000533316 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
ATG13-220ENST00000533316 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
ATG13-220ENST00000533316 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
ATG13-220ENST00000533316 LRRIQ1Q96JM4 1722 aa16.86■□□□□ 0.29
ATG13-220ENST00000533316 TROQ12816 1431 aaPredicted RBP16.86■□□□□ 0.29
ATG13-220ENST00000533316 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
ATG13-220ENST00000533316 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
ATG13-220ENST00000533316 UHRF1BP1Q6BDS2 1440 aa16.85■□□□□ 0.29
ATG13-220ENST00000533316 TRAPPC8Q9Y2L5 1435 aa16.84■□□□□ 0.29
ATG13-220ENST00000533316 KDM5CP41229 1560 aa16.84■□□□□ 0.29
ATG13-220ENST00000533316 ABCA6Q8N139 1617 aa16.83■□□□□ 0.28
ATG13-220ENST00000533316 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
ATG13-220ENST00000533316 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
ATG13-220ENST00000533316 C3P01024 1663 aa16.81■□□□□ 0.28
ATG13-220ENST00000533316 CLIP1P30622 1438 aa16.8■□□□□ 0.28
ATG13-220ENST00000533316 SETD1BQ9UPS6 1966 aaKnown RBP16.79■□□□□ 0.28
ATG13-220ENST00000533316 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
ATG13-220ENST00000533316 ZNF777Q9ULD5 760 aaPredicted RBP16.77■□□□□ 0.28
ATG13-220ENST00000533316 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.28
ATG13-220ENST00000533316 ABCC1P33527 1531 aa16.75■□□□□ 0.27
ATG13-220ENST00000533316 REREQ9P2R6 1566 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 PTPRTO14522 1441 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 SOCS7O14512 581 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 LTBP4Q8N2S1 1624 aa16.74■□□□□ 0.27
ATG13-220ENST00000533316 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
ATG13-220ENST00000533316 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
ATG13-220ENST00000533316 AGLP35573 1532 aa16.72■□□□□ 0.27
ATG13-220ENST00000533316 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.27
ATG13-220ENST00000533316 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
ATG13-220ENST00000533316 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
ATG13-220ENST00000533316 SPATA31D1Q6ZQQ2 1576 aa16.69■□□□□ 0.26
ATG13-220ENST00000533316 CASKIN1Q8WXD9 1431 aa16.69■□□□□ 0.26
ATG13-220ENST00000533316 CAMSAP1Q5T5Y3 1602 aa16.68■□□□□ 0.26
ATG13-220ENST00000533316 SAMD9LQ8IVG5 1584 aa16.68■□□□□ 0.26
ATG13-220ENST00000533316 ZNF335Q9H4Z2 1342 aaPredicted RBP16.68■□□□□ 0.26
ATG13-220ENST00000533316 ZMYM3Q14202 1370 aa16.67■□□□□ 0.26
ATG13-220ENST00000533316 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
ATG13-220ENST00000533316 SYCP2Q9BX26 1530 aa16.66■□□□□ 0.26
ATG13-220ENST00000533316 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
ATG13-220ENST00000533316 CNTLNQ9NXG0 1405 aa16.65■□□□□ 0.26
ATG13-220ENST00000533316 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
ATG13-220ENST00000533316 GGT6Q6P531 493 aa16.63■□□□□ 0.25
ATG13-220ENST00000533316 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
ATG13-220ENST00000533316 CLTCQ00610 1675 aaKnown RBP16.62■□□□□ 0.25
ATG13-220ENST00000533316 UBAP1LF5GYI3 381 aa16.62■□□□□ 0.25
ATG13-220ENST00000533316 NPATQ14207 1427 aa16.61■□□□□ 0.25
ATG13-220ENST00000533316 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
ATG13-220ENST00000533316 ZNF644Q9H582 1327 aaPredicted RBP16.59■□□□□ 0.25
ATG13-220ENST00000533316 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
ATG13-220ENST00000533316 MROH2AA6NES4 1674 aa16.59■□□□□ 0.25
ATG13-220ENST00000533316 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
ATG13-220ENST00000533316 A2MP01023 1474 aa16.58■□□□□ 0.24
ATG13-220ENST00000533316 MYO3AQ8NEV4 1616 aa16.57■□□□□ 0.24
ATG13-220ENST00000533316 IQSEC2Q5JU85 1478 aa16.57■□□□□ 0.24
ATG13-220ENST00000533316 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
ATG13-220ENST00000533316 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
ATG13-220ENST00000533316 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
ATG13-220ENST00000533316 INO80Q9ULG1 1556 aaPredicted RBP16.55■□□□□ 0.24
ATG13-220ENST00000533316 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
ATG13-220ENST00000533316 PKD2Q13563 968 aa16.53■□□□□ 0.24
ATG13-220ENST00000533316 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
ATG13-220ENST00000533316 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
ATG13-220ENST00000533316 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.24
ATG13-220ENST00000533316 FBXO31Q5XUX0 539 aaPredicted RBP16.52■□□□□ 0.24
ATG13-220ENST00000533316 TCOF1Q13428 1488 aaKnown RBP16.52■□□□□ 0.23
ATG13-220ENST00000533316 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
ATG13-220ENST00000533316 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
ATG13-220ENST00000533316 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
ATG13-220ENST00000533316 MTUS2Q5JR59 1369 aa16.5■□□□□ 0.23
ATG13-220ENST00000533316 HSPA1LP34931 641 aa16.49■□□□□ 0.23
ATG13-220ENST00000533316 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
ATG13-220ENST00000533316 DNMT1P26358 1616 aaKnown RBP16.47■□□□□ 0.23
ATG13-220ENST00000533316 KIF3BO15066 747 aa16.46■□□□□ 0.23
ATG13-220ENST00000533316 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
ATG13-220ENST00000533316 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
ATG13-220ENST00000533316 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
ATG13-220ENST00000533316 TIAM1Q13009 1591 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms