RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 AQRO60306 1485 aaKnown RBP eCLIP11.39□□□□□ -0.59
SOX9-AS1-212ENST00000533232 POLA1P09884 1462 aaPredicted RBP11.37□□□□□ -0.59
SOX9-AS1-212ENST00000533232 FYCO1Q9BQS8 1478 aa11.37□□□□□ -0.59
SOX9-AS1-212ENST00000533232 CTTNBP2Q8WZ74 1663 aa11.37□□□□□ -0.59
SOX9-AS1-212ENST00000533232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
SOX9-AS1-212ENST00000533232 MS4A3Q96HJ5 214 aa11.35□□□□□ -0.59
SOX9-AS1-212ENST00000533232 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
SOX9-AS1-212ENST00000533232 FMN1Q68DA7 1419 aa11.34□□□□□ -0.59
SOX9-AS1-212ENST00000533232 MIER1Q8N108 512 aa11.34□□□□□ -0.59
SOX9-AS1-212ENST00000533232 CASKIN1Q8WXD9 1431 aa11.34□□□□□ -0.59
SOX9-AS1-212ENST00000533232 SETD5Q9C0A6 1442 aa11.34□□□□□ -0.59
SOX9-AS1-212ENST00000533232 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
SOX9-AS1-212ENST00000533232 PDS5BQ9NTI5 1447 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 CDAN1Q8IWY9 1227 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
SOX9-AS1-212ENST00000533232 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
SOX9-AS1-212ENST00000533232 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
SOX9-AS1-212ENST00000533232 ITGAEP38570 1179 aa11.28□□□□□ -0.6
SOX9-AS1-212ENST00000533232 NESP48681 1621 aa11.27□□□□□ -0.6
SOX9-AS1-212ENST00000533232 FHOD3Q2V2M9 1422 aa11.27□□□□□ -0.61
SOX9-AS1-212ENST00000533232 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
SOX9-AS1-212ENST00000533232 URB2Q14146 1524 aaKnown RBP11.27□□□□□ -0.61
SOX9-AS1-212ENST00000533232 KIF21AQ7Z4S6 1674 aa11.26□□□□□ -0.61
SOX9-AS1-212ENST00000533232 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
SOX9-AS1-212ENST00000533232 FAM50AQ14320 339 aaKnown RBP11.26□□□□□ -0.61
SOX9-AS1-212ENST00000533232 YTHDC1Q96MU7 727 aaKnown RBP11.26□□□□□ -0.61
SOX9-AS1-212ENST00000533232 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
SOX9-AS1-212ENST00000533232 ATP1B4Q9UN42 357 aaPredicted RBP11.25□□□□□ -0.61
SOX9-AS1-212ENST00000533232 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
SOX9-AS1-212ENST00000533232 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
SOX9-AS1-212ENST00000533232 ATN1P54259 1190 aaPredicted RBP11.23□□□□□ -0.61
SOX9-AS1-212ENST00000533232 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
SOX9-AS1-212ENST00000533232 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
SOX9-AS1-212ENST00000533232 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
SOX9-AS1-212ENST00000533232 FGD6Q6ZV73 1430 aa11.21□□□□□ -0.61
SOX9-AS1-212ENST00000533232 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
SOX9-AS1-212ENST00000533232 EHBP1L1Q8N3D4 1523 aa11.19□□□□□ -0.62
SOX9-AS1-212ENST00000533232 SUPT6HQ7KZ85 1726 aaKnown RBP11.19□□□□□ -0.62
SOX9-AS1-212ENST00000533232 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
SOX9-AS1-212ENST00000533232 GRIN2BQ13224 1484 aa11.17□□□□□ -0.62
SOX9-AS1-212ENST00000533232 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
SOX9-AS1-212ENST00000533232 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
SOX9-AS1-212ENST00000533232 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
SOX9-AS1-212ENST00000533232 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
SOX9-AS1-212ENST00000533232 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
SOX9-AS1-212ENST00000533232 HECW1Q76N89 1606 aa11.14□□□□□ -0.63
SOX9-AS1-212ENST00000533232 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
SOX9-AS1-212ENST00000533232 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
SOX9-AS1-212ENST00000533232 IQGAP2Q13576 1575 aa11.12□□□□□ -0.63
SOX9-AS1-212ENST00000533232 PTPN23Q9H3S7 1636 aa11.12□□□□□ -0.63
SOX9-AS1-212ENST00000533232 BMP2KQ9NSY1 1161 aaPredicted RBP11.12□□□□□ -0.63
SOX9-AS1-212ENST00000533232 UGGT2Q9NYU1 1516 aa11.11□□□□□ -0.63
SOX9-AS1-212ENST00000533232 MRC2Q9UBG0 1479 aa11.11□□□□□ -0.63
SOX9-AS1-212ENST00000533232 PPP1R15AO75807 674 aaPredicted RBP11.11□□□□□ -0.63
SOX9-AS1-212ENST00000533232 LRRIQ1Q96JM4 1722 aa11.11□□□□□ -0.63
SOX9-AS1-212ENST00000533232 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 SEC24BO95487 1268 aa11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 TIE1P35590 1138 aa11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 AKNAQ7Z591 1439 aa11.1□□□□□ -0.63
SOX9-AS1-212ENST00000533232 MMRN1Q13201 1228 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 ADAMTS12P58397 1594 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
SOX9-AS1-212ENST00000533232 NAIPQ13075 1403 aa11.08□□□□□ -0.64
SOX9-AS1-212ENST00000533232 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
SOX9-AS1-212ENST00000533232 ST18O60284 1047 aa11.06□□□□□ -0.64
SOX9-AS1-212ENST00000533232 MYT1Q01538 1121 aa11.06□□□□□ -0.64
SOX9-AS1-212ENST00000533232 GCC2Q8IWJ2 1684 aa11.06□□□□□ -0.64
SOX9-AS1-212ENST00000533232 SPNS2Q8IVW8 549 aa11.05□□□□□ -0.64
SOX9-AS1-212ENST00000533232 EPRSP07814 1512 aaKnown RBP11.05□□□□□ -0.64
SOX9-AS1-212ENST00000533232 CCER2I3L3R5 266 aa11.04□□□□□ -0.64
SOX9-AS1-212ENST00000533232 PTPRKQ15262 1439 aa11.04□□□□□ -0.64
SOX9-AS1-212ENST00000533232 COLQQ9Y215 455 aaPredicted RBP11.04□□□□□ -0.64
SOX9-AS1-212ENST00000533232 WDR62O43379 1518 aa11.03□□□□□ -0.64
SOX9-AS1-212ENST00000533232 ANP32CO43423 234 aa11.03□□□□□ -0.64
SOX9-AS1-212ENST00000533232 KIAA0586Q9BVV6 1533 aa11.02□□□□□ -0.64
SOX9-AS1-212ENST00000533232 DDX10Q13206 875 aaKnown RBP11.02□□□□□ -0.65
SOX9-AS1-212ENST00000533232 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
SOX9-AS1-212ENST00000533232 IER5LQ5T953 404 aa11.01□□□□□ -0.65
SOX9-AS1-212ENST00000533232 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
SOX9-AS1-212ENST00000533232 MAGI3Q5TCQ9 1506 aa11.01□□□□□ -0.65
SOX9-AS1-212ENST00000533232 TRPC6Q9Y210 931 aa11□□□□□ -0.65
SOX9-AS1-212ENST00000533232 ROCK1Q13464 1354 aa10.99□□□□□ -0.65
SOX9-AS1-212ENST00000533232 KIAA0556O60303 1618 aa10.98□□□□□ -0.65
SOX9-AS1-212ENST00000533232 SUPT16HQ9Y5B9 1047 aaKnown RBP10.98□□□□□ -0.65
SOX9-AS1-212ENST00000533232 TTLL13PA6NNM8 815 aa10.97□□□□□ -0.65
SOX9-AS1-212ENST00000533232 TMEM121BQ9BXQ6 578 aaPredicted RBP10.97□□□□□ -0.65
SOX9-AS1-212ENST00000533232 MAP3K13O43283 966 aa10.96□□□□□ -0.65
SOX9-AS1-212ENST00000533232 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
SOX9-AS1-212ENST00000533232 TRIM52Q96A61 297 aa10.95□□□□□ -0.66
SOX9-AS1-212ENST00000533232 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms