RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.02□□□□□ -0.97
TGFBR3-210ENST00000533089 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
TGFBR3-210ENST00000533089 GAPVD1Q14C86 1478 aa9.02□□□□□ -0.97
TGFBR3-210ENST00000533089 FMN1Q68DA7 1419 aa9.02□□□□□ -0.97
TGFBR3-210ENST00000533089 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
TGFBR3-210ENST00000533089 NESP48681 1621 aa9.01□□□□□ -0.97
TGFBR3-210ENST00000533089 CHAF1AQ13111 956 aaPredicted RBP9.01□□□□□ -0.97
TGFBR3-210ENST00000533089 MYH16Q9H6N6 1097 aa9.01□□□□□ -0.97
TGFBR3-210ENST00000533089 GOLGA6L22H0YM25 854 aa9.01□□□□□ -0.97
TGFBR3-210ENST00000533089 DDX10Q13206 875 aaKnown RBP9□□□□□ -0.97
TGFBR3-210ENST00000533089 ZNF771Q7L3S4 317 aaPredicted RBP9□□□□□ -0.97
TGFBR3-210ENST00000533089 CCNB3Q8WWL7 1395 aa9□□□□□ -0.97
TGFBR3-210ENST00000533089 JPH4Q96JJ6 628 aa9□□□□□ -0.97
TGFBR3-210ENST00000533089 PRM3Q9NNZ6 103 aa9□□□□□ -0.97
TGFBR3-210ENST00000533089 LAMC3Q9Y6N6 1575 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 PPP4R2Q9NY27 417 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 RAD54L2Q9Y4B4 1467 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 PAXIP1Q6ZW49 1069 aaPredicted RBP8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 PEG3Q9GZU2 1588 aa8.98□□□□□ -0.97
TGFBR3-210ENST00000533089 TAF7LQ5H9L4 462 aa8.97□□□□□ -0.97
TGFBR3-210ENST00000533089 NPHP1O15259 732 aa8.97□□□□□ -0.97
TGFBR3-210ENST00000533089 LMOD2Q6P5Q4 547 aa8.97□□□□□ -0.97
TGFBR3-210ENST00000533089 MAPK8IP2Q13387 824 aaPredicted RBP8.96□□□□□ -0.98
TGFBR3-210ENST00000533089 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.985e-7■■■□□ 17.1
TGFBR3-210ENST00000533089 IGF1RP08069 1367 aa8.95□□□□□ -0.98
TGFBR3-210ENST00000533089 FAM13BQ9NYF5 915 aa8.95□□□□□ -0.98
TGFBR3-210ENST00000533089 B4GALNT3Q6L9W6 998 aa8.95□□□□□ -0.98
TGFBR3-210ENST00000533089 PTPRGP23470 1445 aa8.94□□□□□ -0.98
TGFBR3-210ENST00000533089 TOPBP1Q92547 1522 aa8.94□□□□□ -0.98
TGFBR3-210ENST00000533089 GSE1Q14687 1217 aa8.94□□□□□ -0.98
TGFBR3-210ENST00000533089 VPS8Q8N3P4 1428 aa8.94□□□□□ -0.98
TGFBR3-210ENST00000533089 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 PLCB2Q00722 1185 aa8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 MRS2Q9HD23 443 aa8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 GZF1Q9H116 711 aaPredicted RBP8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 BBXQ8WY36 941 aaPredicted RBP8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
TGFBR3-210ENST00000533089 RRP7BPQ9NSQ0 103 aa8.92□□□□□ -0.98
TGFBR3-210ENST00000533089 RGL3Q3MIN7 710 aa8.92□□□□□ -0.98
TGFBR3-210ENST00000533089 EFCAB2Q5VUJ9 269 aa8.92□□□□□ -0.98
TGFBR3-210ENST00000533089 RBM10P98175 930 aaKnown RBP8.92□□□□□ -0.98
TGFBR3-210ENST00000533089 DNMBPQ6XZF7 1577 aa8.92□□□□□ -0.98
TGFBR3-210ENST00000533089 BCL11BQ9C0K0 894 aaPredicted RBP8.91□□□□□ -0.98
TGFBR3-210ENST00000533089 HIRIP3Q9BW71 556 aaPredicted RBP8.91□□□□□ -0.98
TGFBR3-210ENST00000533089 POLA1P09884 1462 aaPredicted RBP8.9□□□□□ -0.98
TGFBR3-210ENST00000533089 SENP3-EIF4A1A0A087X0R7 540 aa8.9□□□□□ -0.98
TGFBR3-210ENST00000533089 AEBP1Q8IUX7 1158 aa8.9□□□□□ -0.99
TGFBR3-210ENST00000533089 FHOD3Q2V2M9 1422 aa8.89□□□□□ -0.99
TGFBR3-210ENST00000533089 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
TGFBR3-210ENST00000533089 RRP9O43818 475 aaKnown RBP8.88□□□□□ -0.99
TGFBR3-210ENST00000533089 BRPF3Q9ULD4 1205 aa8.88□□□□□ -0.99
TGFBR3-210ENST00000533089 SETQ01105 290 aaPredicted RBP8.88□□□□□ -0.99
TGFBR3-210ENST00000533089 FANCIQ9NVI1 1328 aa8.88□□□□□ -0.99
TGFBR3-210ENST00000533089 UNC13AQ9UPW8 1703 aa8.87□□□□□ -0.99
TGFBR3-210ENST00000533089 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
TGFBR3-210ENST00000533089 CFAP53Q96M91 514 aa8.86□□□□□ -0.99
TGFBR3-210ENST00000533089 KANK1Q14678 1352 aa8.86□□□□□ -0.99
TGFBR3-210ENST00000533089 CCDC18Q5T9S5 1454 aa8.86□□□□□ -0.99
TGFBR3-210ENST00000533089 GOLGA6L6A8MZA4 724 aa8.86□□□□□ -0.99
TGFBR3-210ENST00000533089 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 GOLGA6L1Q8N7Z2 621 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 CUX1P39880 1505 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 MLECQ14165 292 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 ZRSR1Q15695 479 aaKnown RBP8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 POGKQ9P215 609 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 TOP2BQ02880 1626 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 KIAA2012Q0VF49 1180 aa8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 ISY1Q9ULR0 285 aaKnown RBP8.85□□□□□ -0.99
TGFBR3-210ENST00000533089 SPRYD3Q8NCJ5 442 aa8.84□□□□□ -0.99
TGFBR3-210ENST00000533089 RUSC2Q8N2Y8 1516 aa8.84□□□□□ -0.99
TGFBR3-210ENST00000533089 ABCA10Q8WWZ4 1543 aa8.83□□□□□ -1
TGFBR3-210ENST00000533089 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -16e-7■■■■■ 31.9
TGFBR3-210ENST00000533089 NEUROD2Q15784 382 aa8.83□□□□□ -1
TGFBR3-210ENST00000533089 SNAPC4Q5SXM2 1469 aa8.83□□□□□ -1
TGFBR3-210ENST00000533089 SYNJ1O43426 1573 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 CASC1Q6TDU7 716 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 KRI1Q8N9T8 703 aaKnown RBP8.82□□□□□ -1
TGFBR3-210ENST00000533089 MAP7D2Q96T17 732 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
TGFBR3-210ENST00000533089 GOLGA2Q08379 1002 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 FAM43AQ8N2R8 423 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 KNSTRNQ9Y448 316 aa8.82□□□□□ -1
TGFBR3-210ENST00000533089 PLCD3Q8N3E9 789 aa8.81□□□□□ -1
TGFBR3-210ENST00000533089 MAPK8IP3Q9UPT6 1336 aa8.81□□□□□ -1
TGFBR3-210ENST00000533089 PRG4Q92954 1404 aaPredicted RBP8.81□□□□□ -1
TGFBR3-210ENST00000533089 OS9Q13438 667 aaPredicted RBP8.81□□□□□ -1
TGFBR3-210ENST00000533089 SOX12O15370 315 aa8.8□□□□□ -1
TGFBR3-210ENST00000533089 TPM2P07951 284 aa8.8□□□□□ -1
TGFBR3-210ENST00000533089 E9PSI1 815 aa8.8□□□□□ -1
TGFBR3-210ENST00000533089 CHMP4AQ9BY43 222 aa8.8□□□□□ -1
TGFBR3-210ENST00000533089 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
TGFBR3-210ENST00000533089 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
TGFBR3-210ENST00000533089 HDGFP51858 240 aaKnown RBP8.79□□□□□ -1
TGFBR3-210ENST00000533089 ANKRD30AQ9BXX3 1397 aa8.79□□□□□ -1
TGFBR3-210ENST00000533089 MAGI1Q96QZ7 1491 aaPredicted RBP8.79□□□□□ -1
TGFBR3-210ENST00000533089 RGS3P49796 1198 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms