RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 TNRC18O15417 2968 aaPredicted RBP3.66□□□□□ -1.82
KNL1-211ENST00000533001 RAPGEF6Q8TEU7 1601 aa3.66□□□□□ -1.82
KNL1-211ENST00000533001 TNIKQ9UKE5 1360 aa3.66□□□□□ -1.82
KNL1-211ENST00000533001 CDC42BPAQ5VT25 1732 aa3.66□□□□□ -1.82
KNL1-211ENST00000533001 COL6A3P12111 3177 aa3.65□□□□□ -1.82
KNL1-211ENST00000533001 FAM69CQ0P6D2 419 aa3.65□□□□□ -1.82
KNL1-211ENST00000533001 RIMS1Q86UR5 1692 aaKnown RBP3.65□□□□□ -1.83
KNL1-211ENST00000533001 AGLP35573 1532 aa3.65□□□□□ -1.83
KNL1-211ENST00000533001 PTPRGP23470 1445 aa3.65□□□□□ -1.83
KNL1-211ENST00000533001 NEO1Q92859 1461 aa3.65□□□□□ -1.83
KNL1-211ENST00000533001 PREX1Q8TCU6 1659 aa3.65□□□□□ -1.83
KNL1-211ENST00000533001 CARMIL1Q5VZK9 1371 aa3.65□□□□□ -1.83
KNL1-211ENST00000533001 RAPGEF2Q9Y4G8 1499 aa3.64□□□□□ -1.83
KNL1-211ENST00000533001 VWDEQ8N2E2 1590 aa3.63□□□□□ -1.83
KNL1-211ENST00000533001 INO80Q9ULG1 1556 aaPredicted RBP3.63□□□□□ -1.83
KNL1-211ENST00000533001 TRHP20396 242 aaPredicted RBP3.63□□□□□ -1.83
KNL1-211ENST00000533001 MROH2AA6NES4 1674 aa3.63□□□□□ -1.83
KNL1-211ENST00000533001 MBD5Q9P267 1494 aa3.62□□□□□ -1.83
KNL1-211ENST00000533001 PHF23Q9BUL5 403 aaPredicted RBP3.62□□□□□ -1.83
KNL1-211ENST00000533001 KIF27Q86VH2 1401 aa3.61□□□□□ -1.83
KNL1-211ENST00000533001 CD109Q6YHK3 1445 aa3.61□□□□□ -1.83
KNL1-211ENST00000533001 FBLN2P98095 1184 aa3.61□□□□□ -1.83
KNL1-211ENST00000533001 ABCC1P33527 1531 aa3.61□□□□□ -1.83
KNL1-211ENST00000533001 UNC80Q8N2C7 3258 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 PRUNE2Q8WUY3 3088 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 IQSEC2Q5JU85 1478 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 MLH3Q9UHC1 1453 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 POGZQ7Z3K3 1410 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 PREX2Q70Z35 1606 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 MAGI2Q86UL8 1455 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 NCOA1Q15788 1441 aa3.6□□□□□ -1.83
KNL1-211ENST00000533001 RGS17Q9UGC6 210 aaPredicted RBP3.6□□□□□ -1.83
KNL1-211ENST00000533001 ZNF518AQ6AHZ1 1483 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 TET3O43151 1660 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 ITSN2Q9NZM3 1697 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 CAMSAP2Q08AD1 1489 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 ARHGAP35Q9NRY4 1499 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 SAMD9LQ8IVG5 1584 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 FBXO41Q8TF61 875 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 ADGBQ8N7X0 1667 aa3.59□□□□□ -1.83
KNL1-211ENST00000533001 TEX14Q8IWB6 1497 aa3.59□□□□□ -1.84
KNL1-211ENST00000533001 CDK13Q14004 1512 aaKnown RBP3.59□□□□□ -1.84
KNL1-211ENST00000533001 RAPGEF3O95398 923 aa3.58□□□□□ -1.84
KNL1-211ENST00000533001 DNMT1P26358 1616 aaKnown RBP3.58□□□□□ -1.84
KNL1-211ENST00000533001 MYO3AQ8NEV4 1616 aa3.58□□□□□ -1.84
KNL1-211ENST00000533001 SPTBN5Q9NRC6 3674 aaKnown RBP3.58□□□□□ -1.84
KNL1-211ENST00000533001 MSH5O43196 834 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 MYO5CQ9NQX4 1742 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 MED14O60244 1454 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 PTPRTO14522 1441 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 PLCH2O75038 1416 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 TRAPPC8Q9Y2L5 1435 aa3.57□□□□□ -1.84
KNL1-211ENST00000533001 MAP3K1Q13233 1512 aa3.56□□□□□ -1.84
KNL1-211ENST00000533001 ZFYVE16Q7Z3T8 1539 aa3.56□□□□□ -1.84
KNL1-211ENST00000533001 CDH23Q9H251 3354 aa3.56□□□□□ -1.84
KNL1-211ENST00000533001 POLR1AO95602 1720 aaPredicted RBP3.56□□□□□ -1.84
KNL1-211ENST00000533001 DEPDC5O75140 1603 aa3.56□□□□□ -1.84
KNL1-211ENST00000533001 MED1Q15648 1581 aaPredicted RBP3.55□□□□□ -1.84
KNL1-211ENST00000533001 PTPRKQ15262 1439 aa3.55□□□□□ -1.84
KNL1-211ENST00000533001 AKNAQ7Z591 1439 aa3.55□□□□□ -1.84
KNL1-211ENST00000533001 PHLDB1Q86UU1 1377 aa3.55□□□□□ -1.84
KNL1-211ENST00000533001 LAMC1P11047 1609 aa3.55□□□□□ -1.84
KNL1-211ENST00000533001 PLA2R1Q13018 1463 aa3.55□□□□□ -1.84
KNL1-211ENST00000533001 SETD1AO15047 1707 aaKnown RBP3.55□□□□□ -1.84
KNL1-211ENST00000533001 FANCAO15360 1455 aa3.54□□□□□ -1.84
KNL1-211ENST00000533001 ARHGAP23Q9P227 1491 aa3.54□□□□□ -1.84
KNL1-211ENST00000533001 DIP2AQ14689 1571 aa3.54□□□□□ -1.84
KNL1-211ENST00000533001 RNF17Q9BXT8 1623 aaKnown RBP3.54□□□□□ -1.84
KNL1-211ENST00000533001 SPATA31D1Q6ZQQ2 1576 aa3.54□□□□□ -1.84
KNL1-211ENST00000533001 WDR87Q6ZQQ6 2873 aa3.54□□□□□ -1.84
KNL1-211ENST00000533001 NCOA2Q15596 1464 aa3.53□□□□□ -1.84
KNL1-211ENST00000533001 UBR1Q8IWV7 1749 aa3.53□□□□□ -1.84
KNL1-211ENST00000533001 REV3LO60673 3130 aa3.53□□□□□ -1.84
KNL1-211ENST00000533001 KDM5AP29375 1690 aaKnown RBP3.53□□□□□ -1.84
KNL1-211ENST00000533001 NRXN3Q9Y4C0 1643 aa3.53□□□□□ -1.84
KNL1-211ENST00000533001 TIAM1Q13009 1591 aa3.53□□□□□ -1.85
KNL1-211ENST00000533001 SOCS7O14512 581 aa3.52□□□□□ -1.85
KNL1-211ENST00000533001 GPATCH8Q9UKJ3 1502 aaKnown RBP3.52□□□□□ -1.85
KNL1-211ENST00000533001 HSPA2P54652 639 aa3.52□□□□□ -1.85
KNL1-211ENST00000533001 KDM5DQ9BY66 1539 aa3.52□□□□□ -1.85
KNL1-211ENST00000533001 SUPT6HQ7KZ85 1726 aaKnown RBP3.52□□□□□ -1.85
KNL1-211ENST00000533001 PIK3C2BO00750 1634 aa3.52□□□□□ -1.85
KNL1-211ENST00000533001 MYO5BQ9ULV0 1848 aa3.51□□□□□ -1.85
KNL1-211ENST00000533001 CARMIL2Q6F5E8 1435 aa3.51□□□□□ -1.85
KNL1-211ENST00000533001 CAMSAP1Q5T5Y3 1602 aa3.51□□□□□ -1.85
KNL1-211ENST00000533001 EFCAB5A4FU69 1503 aa3.51□□□□□ -1.85
KNL1-211ENST00000533001 ATP10AO60312 1499 aa3.51□□□□□ -1.85
KNL1-211ENST00000533001 CLTCQ00610 1675 aaKnown RBP3.51□□□□□ -1.85
KNL1-211ENST00000533001 DNAH12Q6ZR08 3092 aa3.5□□□□□ -1.85
KNL1-211ENST00000533001 DENND4BO75064 1496 aaPredicted RBP3.5□□□□□ -1.85
KNL1-211ENST00000533001 NWD1Q149M9 1564 aa3.5□□□□□ -1.85
KNL1-211ENST00000533001 MAST1Q9Y2H9 1570 aa3.5□□□□□ -1.85
KNL1-211ENST00000533001 NPATQ14207 1427 aa3.5□□□□□ -1.85
KNL1-211ENST00000533001 CHD2O14647 1828 aaKnown RBP3.5□□□□□ -1.85
KNL1-211ENST00000533001 COL16A1Q07092 1604 aaPredicted RBP3.5□□□□□ -1.85
KNL1-211ENST00000533001 SYNMO15061 1565 aa3.5□□□□□ -1.85
KNL1-211ENST00000533001 SLIT1O75093 1534 aa3.49□□□□□ -1.85
KNL1-211ENST00000533001 LRRC7Q96NW7 1537 aa3.49□□□□□ -1.85
KNL1-211ENST00000533001 CFAP74Q9C0B2 1584 aa3.49□□□□□ -1.85
KNL1-211ENST00000533001 EFCAB6Q5THR3 1501 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms