RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 CSPP1Q1MSJ5 1256 aa9.61□□□□□ -0.87
CTNND1-233ENST00000532787 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
CTNND1-233ENST00000532787 CC2D1BQ5T0F9 858 aaKnown RBP9.61□□□□□ -0.87
CTNND1-233ENST00000532787 TPM4P67936 248 aa9.61□□□□□ -0.87
CTNND1-233ENST00000532787 PMFBP1Q8TBY8 1022 aa9.61□□□□□ -0.87
CTNND1-233ENST00000532787 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
CTNND1-233ENST00000532787 GOLGA2Q08379 1002 aa9.6□□□□□ -0.87
CTNND1-233ENST00000532787 KIAA1211Q6ZU35 1233 aa9.6□□□□□ -0.87
CTNND1-233ENST00000532787 HDAC5Q9UQL6 1122 aa9.6□□□□□ -0.87
CTNND1-233ENST00000532787 CCDC34Q96HJ3 373 aa9.59□□□□□ -0.87
CTNND1-233ENST00000532787 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
CTNND1-233ENST00000532787 ARHGAP35Q9NRY4 1499 aa9.59□□□□□ -0.87
CTNND1-233ENST00000532787 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
CTNND1-233ENST00000532787 SIN3AQ96ST3 1273 aa9.58□□□□□ -0.88
CTNND1-233ENST00000532787 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-233ENST00000532787 PHLDB1Q86UU1 1377 aa9.57□□□□□ -0.88
CTNND1-233ENST00000532787 PDE3BQ13370 1112 aa9.57□□□□□ -0.88
CTNND1-233ENST00000532787 BAZ1AQ9NRL2 1556 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-233ENST00000532787 RTF1Q92541 710 aaKnown RBP9.57□□□□□ -0.88
CTNND1-233ENST00000532787 EIF3AQ14152 1382 aaKnown RBP9.56□□□□□ -0.88
CTNND1-233ENST00000532787 GOLGA6L3A6NEY3 463 aa9.56□□□□□ -0.88
CTNND1-233ENST00000532787 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
CTNND1-233ENST00000532787 RCAN3Q9UKA8 241 aa9.56□□□□□ -0.88
CTNND1-233ENST00000532787 ROCK2O75116 1388 aaKnown RBP9.56□□□□□ -0.88
CTNND1-233ENST00000532787 PHF14O94880 888 aa9.56□□□□□ -0.88
CTNND1-233ENST00000532787 HDGFL2Q7Z4V5 671 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-233ENST00000532787 DCAF11Q8TEB1 546 aa9.56□□□□□ -0.88
CTNND1-233ENST00000532787 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
CTNND1-233ENST00000532787 CALRP27797 417 aaKnown RBP9.56□□□□□ -0.88
CTNND1-233ENST00000532787 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
CTNND1-233ENST00000532787 NPHP1O15259 732 aa9.54□□□□□ -0.88
CTNND1-233ENST00000532787 IPO9Q96P70 1041 aaKnown RBP9.54□□□□□ -0.88
CTNND1-233ENST00000532787 GPATCH3Q96I76 525 aa9.54□□□□□ -0.88
CTNND1-233ENST00000532787 VSIG10Q8N0Z9 540 aa9.54□□□□□ -0.88
CTNND1-233ENST00000532787 GOLGA6L1Q8N7Z2 621 aa9.54□□□□□ -0.88
CTNND1-233ENST00000532787 CHMP4CQ96CF2 233 aa9.53□□□□□ -0.88
CTNND1-233ENST00000532787 HMMRO75330 724 aa9.53□□□□□ -0.88
CTNND1-233ENST00000532787 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.89
CTNND1-233ENST00000532787 DDX11L8A8MPP1 907 aa9.52□□□□□ -0.89
CTNND1-233ENST00000532787 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
CTNND1-233ENST00000532787 KIF3AQ9Y496 699 aa9.51□□□□□ -0.89
CTNND1-233ENST00000532787 ARID3AQ99856 593 aa9.51□□□□□ -0.89
CTNND1-233ENST00000532787 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-233ENST00000532787 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
CTNND1-233ENST00000532787 RSPH6AQ9H0K4 717 aa9.5□□□□□ -0.89
CTNND1-233ENST00000532787 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-233ENST00000532787 NOC3LQ8WTT2 800 aaKnown RBP9.49□□□□□ -0.89
CTNND1-233ENST00000532787 FMN1Q68DA7 1419 aa9.49□□□□□ -0.89
CTNND1-233ENST00000532787 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
CTNND1-233ENST00000532787 SPAG9O60271 1321 aaKnown RBP9.49□□□□□ -0.89
CTNND1-233ENST00000532787 HSP90AA2PQ14568 343 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-233ENST00000532787 ANKRD30AQ9BXX3 1397 aa9.48□□□□□ -0.89
CTNND1-233ENST00000532787 ST18O60284 1047 aa9.48□□□□□ -0.89
CTNND1-233ENST00000532787 STK31Q9BXU1 1019 aa9.48□□□□□ -0.89
CTNND1-233ENST00000532787 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
CTNND1-233ENST00000532787 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
CTNND1-233ENST00000532787 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
CTNND1-233ENST00000532787 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
CTNND1-233ENST00000532787 CUX2O14529 1486 aa9.46□□□□□ -0.89
CTNND1-233ENST00000532787 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
CTNND1-233ENST00000532787 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.89
CTNND1-233ENST00000532787 PKD2Q13563 968 aa9.46□□□□□ -0.89
CTNND1-233ENST00000532787 NLRP13Q86W25 1043 aa9.46□□□□□ -0.89
CTNND1-233ENST00000532787 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 ATP6V1DQ9Y5K8 247 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 U2AF1L5P0DN76 240 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-233ENST00000532787 U2AF1Q01081 240 aaKnown RBP eCLIP9.45□□□□□ -0.92e-10■■□□□ 12.3
CTNND1-233ENST00000532787 TPM3P06753 285 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 KIF15Q9NS87 1388 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 CENPJQ9HC77 1338 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-233ENST00000532787 CLSTN1O94985 981 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 TSHZ2Q9NRE2 1034 aa9.45□□□□□ -0.9
CTNND1-233ENST00000532787 SETQ01105 290 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-233ENST00000532787 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 CENPQQ7L2Z9 268 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-233ENST00000532787 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
CTNND1-233ENST00000532787 RAB3GAP2Q9H2M9 1393 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 TERF2IPQ9NYB0 399 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
CTNND1-233ENST00000532787 ERCC6Q03468 1493 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 MPHOSPH9Q99550 1183 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 SMC4Q9NTJ3 1288 aa9.44□□□□□ -0.9
CTNND1-233ENST00000532787 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
CTNND1-233ENST00000532787 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-233ENST00000532787 KIF16BQ96L93 1317 aa9.43□□□□□ -0.9
CTNND1-233ENST00000532787 GZF1Q9H116 711 aaPredicted RBP9.43□□□□□ -0.9
CTNND1-233ENST00000532787 GPS2Q13227 327 aa9.43□□□□□ -0.9
CTNND1-233ENST00000532787 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
CTNND1-233ENST00000532787 A0A0U1RQG5 324 aaPredicted RBP9.42□□□□□ -0.9
CTNND1-233ENST00000532787 FAM161AQ3B820 660 aa9.41□□□□□ -0.9
CTNND1-233ENST00000532787 MYBBP1AQ9BQG0 1328 aaKnown RBP9.41□□□□□ -0.9
CTNND1-233ENST00000532787 GORABQ5T7V8 394 aa9.41□□□□□ -0.9
CTNND1-233ENST00000532787 NUP155O75694 1391 aa9.4□□□□□ -0.9
CTNND1-233ENST00000532787 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.9
CTNND1-233ENST00000532787 TRIM6-TRIM34B2RNG4 842 aa9.4□□□□□ -0.9
CTNND1-233ENST00000532787 CCDC70Q6NSX1 233 aa9.4□□□□□ -0.9
CTNND1-233ENST00000532787 TMX4Q9H1E5 349 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-233ENST00000532787 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
CTNND1-233ENST00000532787 ISY1Q9ULR0 285 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms