RNA–Protein interactions for RNA: ENST00000532721.1

RCN1-209, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-209ENST00000532721 LRRIQ1Q96JM4 1722 aa22.25■■□□□ 1.15
RCN1-209ENST00000532721 PLCH2O75038 1416 aa22.24■■□□□ 1.15
RCN1-209ENST00000532721 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
RCN1-209ENST00000532721 ATP1B4Q9UN42 357 aaPredicted RBP22.21■■□□□ 1.15
RCN1-209ENST00000532721 TROQ12816 1431 aaPredicted RBP22.21■■□□□ 1.15
RCN1-209ENST00000532721 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
RCN1-209ENST00000532721 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
RCN1-209ENST00000532721 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
RCN1-209ENST00000532721 KIF14Q15058 1648 aa22.19■■□□□ 1.14
RCN1-209ENST00000532721 ARHGEF40Q8TER5 1519 aa22.17■■□□□ 1.14
RCN1-209ENST00000532721 MYO5CQ9NQX4 1742 aa22.15■■□□□ 1.14
RCN1-209ENST00000532721 CCDC18Q5T9S5 1454 aa22.15■■□□□ 1.14
RCN1-209ENST00000532721 CLIP1P30622 1438 aa22.14■■□□□ 1.13
RCN1-209ENST00000532721 STRCQ7RTU9 1775 aa22.13■■□□□ 1.13
RCN1-209ENST00000532721 POGZQ7Z3K3 1410 aa22.13■■□□□ 1.13
RCN1-209ENST00000532721 MAGI2Q86UL8 1455 aa22.12■■□□□ 1.13
RCN1-209ENST00000532721 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
RCN1-209ENST00000532721 SCAPERQ9BY12 1400 aa22.12■■□□□ 1.13
RCN1-209ENST00000532721 EFCAB2Q5VUJ9 269 aa22.1■■□□□ 1.13
RCN1-209ENST00000532721 SIGLEC1Q9BZZ2 1709 aa22.1■■□□□ 1.13
RCN1-209ENST00000532721 YEATS2Q9ULM3 1422 aa22.09■■□□□ 1.13
RCN1-209ENST00000532721 ZFYVE16Q7Z3T8 1539 aa22.08■■□□□ 1.13
RCN1-209ENST00000532721 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
RCN1-209ENST00000532721 CDC42BPBQ9Y5S2 1711 aa22.04■■□□□ 1.12
RCN1-209ENST00000532721 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
RCN1-209ENST00000532721 FER1L4A9Z1Z3 1794 aa22.03■■□□□ 1.12
RCN1-209ENST00000532721 DMRT2Q9Y5R5 561 aa22.03■■□□□ 1.12
RCN1-209ENST00000532721 PREX2Q70Z35 1606 aa22.02■■□□□ 1.12
RCN1-209ENST00000532721 KDM5CP41229 1560 aa22.02■■□□□ 1.12
RCN1-209ENST00000532721 ZNF518AQ6AHZ1 1483 aa22.01■■□□□ 1.11
RCN1-209ENST00000532721 LTBP4Q8N2S1 1624 aa22■■□□□ 1.11
RCN1-209ENST00000532721 MLECQ14165 292 aa22■■□□□ 1.11
RCN1-209ENST00000532721 ATP10AO60312 1499 aa21.97■■□□□ 1.11
RCN1-209ENST00000532721 ABCC1P33527 1531 aa21.96■■□□□ 1.11
RCN1-209ENST00000532721 ARHGEF12Q9NZN5 1544 aa21.96■■□□□ 1.11
RCN1-209ENST00000532721 CDC42BPAQ5VT25 1732 aa21.96■■□□□ 1.11
RCN1-209ENST00000532721 AFAP1Q8N556 730 aa21.95■■□□□ 1.1
RCN1-209ENST00000532721 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
RCN1-209ENST00000532721 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
RCN1-209ENST00000532721 CEBPAP49715 358 aaPredicted RBP21.93■■□□□ 1.1
RCN1-209ENST00000532721 IQSEC2Q5JU85 1478 aa21.93■■□□□ 1.1
RCN1-209ENST00000532721 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
RCN1-209ENST00000532721 MLH3Q9UHC1 1453 aa21.92■■□□□ 1.1
RCN1-209ENST00000532721 PTPRTO14522 1441 aa21.92■■□□□ 1.1
RCN1-209ENST00000532721 TRAPPC8Q9Y2L5 1435 aa21.92■■□□□ 1.1
RCN1-209ENST00000532721 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
RCN1-209ENST00000532721 REREQ9P2R6 1566 aa21.9■■□□□ 1.1
RCN1-209ENST00000532721 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
RCN1-209ENST00000532721 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
RCN1-209ENST00000532721 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
RCN1-209ENST00000532721 UHRF1BP1Q6BDS2 1440 aa21.85■■□□□ 1.09
RCN1-209ENST00000532721 MED1Q15648 1581 aaPredicted RBP21.85■■□□□ 1.09
RCN1-209ENST00000532721 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
RCN1-209ENST00000532721 KIDINS220Q9ULH0 1771 aa21.83■■□□□ 1.09
RCN1-209ENST00000532721 KIAA1107Q9UPP5 1409 aa21.81■■□□□ 1.08
RCN1-209ENST00000532721 AGLP35573 1532 aa21.81■■□□□ 1.08
RCN1-209ENST00000532721 EHBP1L1Q8N3D4 1523 aa21.81■■□□□ 1.08
RCN1-209ENST00000532721 SYCP2Q9BX26 1530 aa21.81■■□□□ 1.08
RCN1-209ENST00000532721 UBAP1LF5GYI3 381 aa21.81■■□□□ 1.08
RCN1-209ENST00000532721 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
RCN1-209ENST00000532721 TIAM1Q13009 1591 aa21.78■■□□□ 1.08
RCN1-209ENST00000532721 SETD1BQ9UPS6 1966 aaKnown RBP21.78■■□□□ 1.08
RCN1-209ENST00000532721 LOC105371045A0A1W2PR82 267 aa21.78■■□□□ 1.08
RCN1-209ENST00000532721 ZNF777Q9ULD5 760 aaPredicted RBP21.78■■□□□ 1.08
RCN1-209ENST00000532721 PLEKHH2Q8IVE3 1493 aa21.77■■□□□ 1.08
RCN1-209ENST00000532721 CFDP1Q9UEE9 299 aaPredicted RBP21.77■■□□□ 1.08
RCN1-209ENST00000532721 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
RCN1-209ENST00000532721 MYT1LQ9UL68 1186 aa21.75■■□□□ 1.07
RCN1-209ENST00000532721 INO80Q9ULG1 1556 aaPredicted RBP21.72■■□□□ 1.07
RCN1-209ENST00000532721 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
RCN1-209ENST00000532721 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
RCN1-209ENST00000532721 SPAG9O60271 1321 aaKnown RBP21.71■■□□□ 1.07
RCN1-209ENST00000532721 ATP7AQ04656 1500 aa21.7■■□□□ 1.07
RCN1-209ENST00000532721 NCOA1Q15788 1441 aa21.7■■□□□ 1.06
RCN1-209ENST00000532721 HSPA1LP34931 641 aa21.69■■□□□ 1.06
RCN1-209ENST00000532721 ZNF335Q9H4Z2 1342 aaPredicted RBP21.69■■□□□ 1.06
RCN1-209ENST00000532721 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
RCN1-209ENST00000532721 NCOA2Q15596 1464 aa21.69■■□□□ 1.06
RCN1-209ENST00000532721 PLXNC1O60486 1568 aa21.68■■□□□ 1.06
RCN1-209ENST00000532721 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
RCN1-209ENST00000532721 C3P01024 1663 aa21.66■■□□□ 1.06
RCN1-209ENST00000532721 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
RCN1-209ENST00000532721 LRRC9Q6ZRR7 1453 aa21.64■■□□□ 1.05
RCN1-209ENST00000532721 A2MP01023 1474 aa21.63■■□□□ 1.05
RCN1-209ENST00000532721 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
RCN1-209ENST00000532721 CNTLNQ9NXG0 1405 aa21.62■■□□□ 1.05
RCN1-209ENST00000532721 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
RCN1-209ENST00000532721 CAMSAP2Q08AD1 1489 aa21.59■■□□□ 1.05
RCN1-209ENST00000532721 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.05
RCN1-209ENST00000532721 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.05
RCN1-209ENST00000532721 MROH2AA6NES4 1674 aa21.58■■□□□ 1.05
RCN1-209ENST00000532721 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.05
RCN1-209ENST00000532721 NCKAP5LQ9HCH0 1330 aa21.56■■□□□ 1.04
RCN1-209ENST00000532721 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
RCN1-209ENST00000532721 CCDC141Q6ZP82 1450 aa21.56■■□□□ 1.04
RCN1-209ENST00000532721 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
RCN1-209ENST00000532721 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
RCN1-209ENST00000532721 ARHGEF5Q12774 1597 aa21.54■■□□□ 1.04
RCN1-209ENST00000532721 RSPH4AQ5TD94 716 aa21.54■■□□□ 1.04
RCN1-209ENST00000532721 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms