RNA–Protein interactions for RNA: ENST00000532671.1

MRPL49-207, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 2

Gene MRPL49, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-207ENST00000532671 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
MRPL49-207ENST00000532671 NEFMP07197 916 aa16.61■□□□□ 0.25
MRPL49-207ENST00000532671 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
MRPL49-207ENST00000532671 RNF123Q5XPI4 1314 aa16.59■□□□□ 0.25
MRPL49-207ENST00000532671 KDM6BO15054 1643 aa16.59■□□□□ 0.25
MRPL49-207ENST00000532671 MPHOSPH9Q99550 1183 aa16.57■□□□□ 0.24
MRPL49-207ENST00000532671 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
MRPL49-207ENST00000532671 URB2Q14146 1524 aaKnown RBP16.56■□□□□ 0.24
MRPL49-207ENST00000532671 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
MRPL49-207ENST00000532671 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
MRPL49-207ENST00000532671 EXOC6Q8TAG9 804 aa16.53■□□□□ 0.24
MRPL49-207ENST00000532671 BRPF3Q9ULD4 1205 aa16.53■□□□□ 0.24
MRPL49-207ENST00000532671 SKAP1Q86WV1 359 aa16.52■□□□□ 0.24
MRPL49-207ENST00000532671 PDE4AP27815 886 aa16.52■□□□□ 0.23
MRPL49-207ENST00000532671 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
MRPL49-207ENST00000532671 EFCAB5A4FU69 1503 aa16.5■□□□□ 0.23
MRPL49-207ENST00000532671 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
MRPL49-207ENST00000532671 TOPBP1Q92547 1522 aa16.49■□□□□ 0.23
MRPL49-207ENST00000532671 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
MRPL49-207ENST00000532671 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
MRPL49-207ENST00000532671 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
MRPL49-207ENST00000532671 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
MRPL49-207ENST00000532671 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
MRPL49-207ENST00000532671 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
MRPL49-207ENST00000532671 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.22
MRPL49-207ENST00000532671 BACH2Q9BYV9 841 aa16.46■□□□□ 0.22
MRPL49-207ENST00000532671 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
MRPL49-207ENST00000532671 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
MRPL49-207ENST00000532671 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
MRPL49-207ENST00000532671 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
MRPL49-207ENST00000532671 GCC2Q8IWJ2 1684 aa16.44■□□□□ 0.22
MRPL49-207ENST00000532671 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
MRPL49-207ENST00000532671 SLC4A3P48751 1232 aa16.44■□□□□ 0.22
MRPL49-207ENST00000532671 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
MRPL49-207ENST00000532671 MAGI3Q5TCQ9 1506 aa16.44■□□□□ 0.22
MRPL49-207ENST00000532671 USP35Q9P2H5 1018 aa16.43■□□□□ 0.22
MRPL49-207ENST00000532671 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
MRPL49-207ENST00000532671 TEX14Q8IWB6 1497 aa16.43■□□□□ 0.22
MRPL49-207ENST00000532671 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
MRPL49-207ENST00000532671 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
MRPL49-207ENST00000532671 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
MRPL49-207ENST00000532671 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
MRPL49-207ENST00000532671 UGGT2Q9NYU1 1516 aa16.41■□□□□ 0.22
MRPL49-207ENST00000532671 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
MRPL49-207ENST00000532671 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
MRPL49-207ENST00000532671 RPRD2Q5VT52 1461 aaKnown RBP16.4■□□□□ 0.22
MRPL49-207ENST00000532671 WDR62O43379 1518 aa16.4■□□□□ 0.22
MRPL49-207ENST00000532671 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
MRPL49-207ENST00000532671 EIF5BO60841 1220 aaKnown RBP16.4■□□□□ 0.22
MRPL49-207ENST00000532671 PLIN1O60240 522 aa16.38■□□□□ 0.21
MRPL49-207ENST00000532671 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
MRPL49-207ENST00000532671 EHBP1L1Q8N3D4 1523 aa16.38■□□□□ 0.21
MRPL49-207ENST00000532671 GSE1Q14687 1217 aa16.38■□□□□ 0.21
MRPL49-207ENST00000532671 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
MRPL49-207ENST00000532671 FRAT1Q92837 279 aaPredicted RBP16.37■□□□□ 0.21
MRPL49-207ENST00000532671 NFKBIBQ15653 356 aa16.36■□□□□ 0.21
MRPL49-207ENST00000532671 USP47Q96K76 1375 aa16.36■□□□□ 0.21
MRPL49-207ENST00000532671 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
MRPL49-207ENST00000532671 TCOF1Q13428 1488 aaKnown RBP16.35■□□□□ 0.21
MRPL49-207ENST00000532671 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
MRPL49-207ENST00000532671 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
MRPL49-207ENST00000532671 MS4A1P11836 297 aa16.33■□□□□ 0.2
MRPL49-207ENST00000532671 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
MRPL49-207ENST00000532671 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
MRPL49-207ENST00000532671 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
MRPL49-207ENST00000532671 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
MRPL49-207ENST00000532671 LRPPRCP42704 1394 aaKnown RBP16.3■□□□□ 0.2
MRPL49-207ENST00000532671 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
MRPL49-207ENST00000532671 ZNF644Q9H582 1327 aaPredicted RBP16.29■□□□□ 0.2
MRPL49-207ENST00000532671 CRBNQ96SW2 442 aa16.29■□□□□ 0.2
MRPL49-207ENST00000532671 CUL7Q14999 1698 aa16.28■□□□□ 0.2
MRPL49-207ENST00000532671 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
MRPL49-207ENST00000532671 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
MRPL49-207ENST00000532671 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
MRPL49-207ENST00000532671 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
MRPL49-207ENST00000532671 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
MRPL49-207ENST00000532671 FRAT2O75474 233 aaPredicted RBP16.24■□□□□ 0.19
MRPL49-207ENST00000532671 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
MRPL49-207ENST00000532671 KDM5CP41229 1560 aa16.23■□□□□ 0.19
MRPL49-207ENST00000532671 DAPK1P53355 1430 aa16.23■□□□□ 0.19
MRPL49-207ENST00000532671 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
MRPL49-207ENST00000532671 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
MRPL49-207ENST00000532671 MBD5Q9P267 1494 aa16.22■□□□□ 0.19
MRPL49-207ENST00000532671 DAXXQ9UER7 740 aaPredicted RBP16.22■□□□□ 0.19
MRPL49-207ENST00000532671 ABCC5O15440 1437 aa16.21■□□□□ 0.19
MRPL49-207ENST00000532671 ST20-MTHFSA0A0A6YYL1 179 aa16.21■□□□□ 0.19
MRPL49-207ENST00000532671 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
MRPL49-207ENST00000532671 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
MRPL49-207ENST00000532671 PZPP20742 1482 aa16.2■□□□□ 0.18
MRPL49-207ENST00000532671 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
MRPL49-207ENST00000532671 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
MRPL49-207ENST00000532671 PKD2Q13563 968 aa16.18■□□□□ 0.18
MRPL49-207ENST00000532671 RALBP1Q15311 655 aa16.17■□□□□ 0.18
MRPL49-207ENST00000532671 ROCK2O75116 1388 aaKnown RBP16.16■□□□□ 0.18
MRPL49-207ENST00000532671 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
MRPL49-207ENST00000532671 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
MRPL49-207ENST00000532671 KIF14Q15058 1648 aa16.16■□□□□ 0.18
MRPL49-207ENST00000532671 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
MRPL49-207ENST00000532671 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
MRPL49-207ENST00000532671 C8orf34Q49A92 452 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms