RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 ABCC5O15440 1437 aa8.37□□□□□ -1.07
RDX-213ENST00000532461 ABCC10Q5T3U5 1492 aa8.37□□□□□ -1.07
RDX-213ENST00000532461 GTF3C3Q9Y5Q9 886 aa8.37□□□□□ -1.07
RDX-213ENST00000532461 MSH5O43196 834 aa8.36□□□□□ -1.07
RDX-213ENST00000532461 CAMSAP2Q08AD1 1489 aa8.36□□□□□ -1.07
RDX-213ENST00000532461 RPRD2Q5VT52 1461 aaKnown RBP8.36□□□□□ -1.07
RDX-213ENST00000532461 TEX14Q8IWB6 1497 aa8.36□□□□□ -1.07
RDX-213ENST00000532461 GPATCH8Q9UKJ3 1502 aaKnown RBP8.36□□□□□ -1.07
RDX-213ENST00000532461 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
RDX-213ENST00000532461 MBD5Q9P267 1494 aa8.35□□□□□ -1.07
RDX-213ENST00000532461 MAST1Q9Y2H9 1570 aa8.35□□□□□ -1.07
RDX-213ENST00000532461 CHD1O14646 1710 aa8.34□□□□□ -1.07
RDX-213ENST00000532461 CDC42BPBQ9Y5S2 1711 aa8.34□□□□□ -1.07
RDX-213ENST00000532461 PZPP20742 1482 aa8.33□□□□□ -1.08
RDX-213ENST00000532461 CARMIL2Q6F5E8 1435 aa8.33□□□□□ -1.08
RDX-213ENST00000532461 ANKRD30BQ9BXX2 1392 aa8.32□□□□□ -1.08
RDX-213ENST00000532461 SIN3AQ96ST3 1273 aa8.32□□□□□ -1.08
RDX-213ENST00000532461 ERCC6Q03468 1493 aa8.32□□□□□ -1.08
RDX-213ENST00000532461 CCER2I3L3R5 266 aa8.32□□□□□ -1.08
RDX-213ENST00000532461 ITGAEP38570 1179 aa8.32□□□□□ -1.08
RDX-213ENST00000532461 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
RDX-213ENST00000532461 PLB1Q6P1J6 1458 aa8.31□□□□□ -1.08
RDX-213ENST00000532461 UNC13BO14795 1591 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 PTPRGP23470 1445 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 SPATA31E1Q6ZUB1 1445 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 TONSLQ96HA7 1378 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 ATP10BO94823 1461 aa8.3□□□□□ -1.08
RDX-213ENST00000532461 ARHGEF12Q9NZN5 1544 aa8.29□□□□□ -1.08
RDX-213ENST00000532461 LAMC1P11047 1609 aa8.28□□□□□ -1.08
RDX-213ENST00000532461 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
RDX-213ENST00000532461 SAMD9LQ8IVG5 1584 aa8.28□□□□□ -1.08
RDX-213ENST00000532461 POTEDQ86YR6 584 aa8.28□□□□□ -1.08
RDX-213ENST00000532461 MYO5CQ9NQX4 1742 aa8.28□□□□□ -1.08
RDX-213ENST00000532461 UHRF1BP1Q6BDS2 1440 aa8.27□□□□□ -1.09
RDX-213ENST00000532461 CLASP1Q7Z460 1538 aa8.27□□□□□ -1.09
RDX-213ENST00000532461 KDM5CP41229 1560 aa8.27□□□□□ -1.09
RDX-213ENST00000532461 ATP1B4Q9UN42 357 aaPredicted RBP8.27□□□□□ -1.09
RDX-213ENST00000532461 CDK11AQ9UQ88 783 aaPredicted RBP8.27□□□□□ -1.09
RDX-213ENST00000532461 E9PCH4 1651 aa8.27□□□□□ -1.09
RDX-213ENST00000532461 MPHOSPH9Q99550 1183 aa8.26□□□□□ -1.09
RDX-213ENST00000532461 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
RDX-213ENST00000532461 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
RDX-213ENST00000532461 KIAA1107Q9UPP5 1409 aa8.25□□□□□ -1.09
RDX-213ENST00000532461 UHRF1BP1LA0JNW5 1464 aa8.25□□□□□ -1.09
RDX-213ENST00000532461 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
RDX-213ENST00000532461 ABCC2Q92887 1545 aa8.24□□□□□ -1.09
RDX-213ENST00000532461 BCORL1Q5H9F3 1711 aa8.23□□□□□ -1.09
RDX-213ENST00000532461 TTC37Q6PGP7 1564 aa8.23□□□□□ -1.09
RDX-213ENST00000532461 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
RDX-213ENST00000532461 CNTLNQ9NXG0 1405 aa8.22□□□□□ -1.09
RDX-213ENST00000532461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.22□□□□□ -1.09
RDX-213ENST00000532461 RALGAPBQ86X10 1494 aa8.22□□□□□ -1.09
RDX-213ENST00000532461 TRPM1Q7Z4N2 1603 aa8.22□□□□□ -1.09
RDX-213ENST00000532461 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
RDX-213ENST00000532461 ATP10AO60312 1499 aa8.21□□□□□ -1.09
RDX-213ENST00000532461 C9orf84Q5VXU9 1444 aa8.21□□□□□ -1.09
RDX-213ENST00000532461 DEPDC5O75140 1603 aa8.21□□□□□ -1.1
RDX-213ENST00000532461 NEURL4Q96JN8 1562 aa8.21□□□□□ -1.1
RDX-213ENST00000532461 CCDC141Q6ZP82 1450 aa8.21□□□□□ -1.1
RDX-213ENST00000532461 ZCCHC11Q5TAX3 1644 aaKnown RBP8.21□□□□□ -1.1
RDX-213ENST00000532461 CHMP7Q8WUX9 453 aaPredicted RBP8.21□□□□□ -1.1
RDX-213ENST00000532461 YTHDC1Q96MU7 727 aaKnown RBP8.21□□□□□ -1.1
RDX-213ENST00000532461 RRP7BPQ9NSQ0 103 aa8.2□□□□□ -1.1
RDX-213ENST00000532461 ARID4BQ4LE39 1312 aaPredicted RBP8.2□□□□□ -1.1
RDX-213ENST00000532461 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
RDX-213ENST00000532461 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
RDX-213ENST00000532461 WASHC2AQ641Q2 1341 aa8.19□□□□□ -1.1
RDX-213ENST00000532461 RNF17Q9BXT8 1623 aaKnown RBP8.19□□□□□ -1.1
RDX-213ENST00000532461 ZNF644Q9H582 1327 aaPredicted RBP8.19□□□□□ -1.1
RDX-213ENST00000532461 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
RDX-213ENST00000532461 DDX10Q13206 875 aaKnown RBP8.18□□□□□ -1.1
RDX-213ENST00000532461 CCDC7Q96M83 1385 aa8.18□□□□□ -1.1
RDX-213ENST00000532461 FAM135AQ9P2D6 1515 aa8.18□□□□□ -1.1
RDX-213ENST00000532461 RSPH4AQ5TD94 716 aa8.18□□□□□ -1.1
RDX-213ENST00000532461 L3MBTL2Q969R5 705 aa8.17□□□□□ -1.1
RDX-213ENST00000532461 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
RDX-213ENST00000532461 ABCC1P33527 1531 aa8.17□□□□□ -1.1
RDX-213ENST00000532461 EIF2AK4Q9P2K8 1649 aaKnown RBP8.16□□□□□ -1.1
RDX-213ENST00000532461 CEP152O94986 1710 aa8.16□□□□□ -1.1
RDX-213ENST00000532461 DUOX2Q9NRD8 1548 aa8.16□□□□□ -1.1
RDX-213ENST00000532461 ABCA9Q8IUA7 1624 aa8.16□□□□□ -1.1
RDX-213ENST00000532461 HSPA5P11021 654 aaKnown RBP8.16□□□□□ -1.1
RDX-213ENST00000532461 KCNH8Q96L42 1107 aa8.16□□□□□ -1.1
RDX-213ENST00000532461 ANP32CO43423 234 aa8.16□□□□□ -1.1
RDX-213ENST00000532461 EIF4G2P78344 907 aaKnown RBP eCLIP8.16□□□□□ -1.11e-35■■■■■ 36.1
RDX-213ENST00000532461 SYCP2Q9BX26 1530 aa8.15□□□□□ -1.1
RDX-213ENST00000532461 ERCC6L2Q5T890 1561 aa8.15□□□□□ -1.1
RDX-213ENST00000532461 CHIC2Q9UKJ5 165 aa8.15□□□□□ -1.1
RDX-213ENST00000532461 ERBINQ96RT1 1412 aa8.15□□□□□ -1.1
RDX-213ENST00000532461 VWDEQ8N2E2 1590 aa8.15□□□□□ -1.1
RDX-213ENST00000532461 KIAA1210Q9ULL0 1709 aa8.15□□□□□ -1.11
RDX-213ENST00000532461 WDR7Q9Y4E6 1490 aa8.14□□□□□ -1.11
RDX-213ENST00000532461 PRDM15P57071 1507 aaPredicted RBP8.14□□□□□ -1.11
RDX-213ENST00000532461 NBPF8Q3BBV2 869 aa8.14□□□□□ -1.11
RDX-213ENST00000532461 INO80Q9ULG1 1556 aaPredicted RBP8.14□□□□□ -1.11
RDX-213ENST00000532461 PLEKHD1A6NEE1 506 aa8.14□□□□□ -1.11
RDX-213ENST00000532461 SPHKAPQ2M3C7 1700 aa8.13□□□□□ -1.11
RDX-213ENST00000532461 DHX29Q7Z478 1369 aaKnown RBP8.13□□□□□ -1.11
RDX-213ENST00000532461 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms