RNA–Protein interactions for RNA: ENST00000532257.1

GEN1-205, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 4

Gene GEN1, Length 498 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-205ENST00000532257 CEBPAP49715 358 aaPredicted RBP17.98■□□□□ 0.47
GEN1-205ENST00000532257 UBAP1LF5GYI3 381 aa17.95■□□□□ 0.46
GEN1-205ENST00000532257 CFAP74Q9C0B2 1584 aa17.94■□□□□ 0.46
GEN1-205ENST00000532257 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
GEN1-205ENST00000532257 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
GEN1-205ENST00000532257 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
GEN1-205ENST00000532257 NCOA1Q15788 1441 aa17.88■□□□□ 0.45
GEN1-205ENST00000532257 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
GEN1-205ENST00000532257 C3P01024 1663 aa17.84■□□□□ 0.45
GEN1-205ENST00000532257 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.44
GEN1-205ENST00000532257 HSPA1LP34931 641 aa17.83■□□□□ 0.44
GEN1-205ENST00000532257 RAPGEF6Q8TEU7 1601 aa17.83■□□□□ 0.44
GEN1-205ENST00000532257 ATP10AO60312 1499 aa17.82■□□□□ 0.44
GEN1-205ENST00000532257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
GEN1-205ENST00000532257 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
GEN1-205ENST00000532257 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.78■□□□□ 0.44
GEN1-205ENST00000532257 CAMSAP1Q5T5Y3 1602 aa17.78■□□□□ 0.44
GEN1-205ENST00000532257 SCAF1Q9H7N4 1312 aaKnown RBP17.77■□□□□ 0.44
GEN1-205ENST00000532257 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
GEN1-205ENST00000532257 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
GEN1-205ENST00000532257 SCAPERQ9BY12 1400 aa17.73■□□□□ 0.43
GEN1-205ENST00000532257 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
GEN1-205ENST00000532257 NUP153P49790 1475 aaKnown RBP17.73■□□□□ 0.43
GEN1-205ENST00000532257 TRAPPC8Q9Y2L5 1435 aa17.72■□□□□ 0.43
GEN1-205ENST00000532257 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
GEN1-205ENST00000532257 SAMD9Q5K651 1589 aa17.67■□□□□ 0.42
GEN1-205ENST00000532257 DIP2CQ9Y2E4 1556 aa17.66■□□□□ 0.42
GEN1-205ENST00000532257 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
GEN1-205ENST00000532257 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
GEN1-205ENST00000532257 REREQ9P2R6 1566 aa17.63■□□□□ 0.41
GEN1-205ENST00000532257 TOM1O60784 492 aa17.62■□□□□ 0.41
GEN1-205ENST00000532257 KDM5CP41229 1560 aa17.62■□□□□ 0.41
GEN1-205ENST00000532257 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
GEN1-205ENST00000532257 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
GEN1-205ENST00000532257 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
GEN1-205ENST00000532257 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
GEN1-205ENST00000532257 PLCH2O75038 1416 aa17.6■□□□□ 0.41
GEN1-205ENST00000532257 TCOF1Q13428 1488 aaKnown RBP17.6■□□□□ 0.41
GEN1-205ENST00000532257 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
GEN1-205ENST00000532257 AGLP35573 1532 aa17.6■□□□□ 0.41
GEN1-205ENST00000532257 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
GEN1-205ENST00000532257 NPATQ14207 1427 aa17.58■□□□□ 0.41
GEN1-205ENST00000532257 RGS17Q9UGC6 210 aaPredicted RBP17.58■□□□□ 0.4
GEN1-205ENST00000532257 ALKQ9UM73 1620 aa17.58■□□□□ 0.4
GEN1-205ENST00000532257 PRXQ9BXM0 1461 aa17.57■□□□□ 0.4
GEN1-205ENST00000532257 PKD2Q13563 968 aa17.57■□□□□ 0.4
GEN1-205ENST00000532257 MYO5CQ9NQX4 1742 aa17.57■□□□□ 0.4
GEN1-205ENST00000532257 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
GEN1-205ENST00000532257 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
GEN1-205ENST00000532257 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
GEN1-205ENST00000532257 CPS1P31327 1500 aa17.56■□□□□ 0.4
GEN1-205ENST00000532257 CEP170BQ9Y4F5 1589 aaPredicted RBP17.54■□□□□ 0.4
GEN1-205ENST00000532257 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
GEN1-205ENST00000532257 SETD1AO15047 1707 aaKnown RBP17.52■□□□□ 0.39
GEN1-205ENST00000532257 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
GEN1-205ENST00000532257 PTPRKQ15262 1439 aa17.5■□□□□ 0.39
GEN1-205ENST00000532257 EFCAB2Q5VUJ9 269 aa17.49■□□□□ 0.39
GEN1-205ENST00000532257 CDK13Q14004 1512 aaKnown RBP17.48■□□□□ 0.39
GEN1-205ENST00000532257 SHANK2Q9UPX8 1470 aa17.48■□□□□ 0.39
GEN1-205ENST00000532257 POLR1AO95602 1720 aaPredicted RBP17.47■□□□□ 0.39
GEN1-205ENST00000532257 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
GEN1-205ENST00000532257 ZMYM3Q14202 1370 aa17.45■□□□□ 0.38
GEN1-205ENST00000532257 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
GEN1-205ENST00000532257 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
GEN1-205ENST00000532257 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
GEN1-205ENST00000532257 CLTCQ00610 1675 aaKnown RBP17.44■□□□□ 0.38
GEN1-205ENST00000532257 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
GEN1-205ENST00000532257 VWDEQ8N2E2 1590 aa17.41■□□□□ 0.38
GEN1-205ENST00000532257 KIDINS220Q9ULH0 1771 aa17.41■□□□□ 0.38
GEN1-205ENST00000532257 KIF14Q15058 1648 aa17.41■□□□□ 0.38
GEN1-205ENST00000532257 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.38
GEN1-205ENST00000532257 RNF17Q9BXT8 1623 aaKnown RBP17.39■□□□□ 0.37
GEN1-205ENST00000532257 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
GEN1-205ENST00000532257 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
GEN1-205ENST00000532257 A2ML1A8K2U0 1454 aa17.36■□□□□ 0.37
GEN1-205ENST00000532257 ABCC1P33527 1531 aa17.36■□□□□ 0.37
GEN1-205ENST00000532257 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
GEN1-205ENST00000532257 STRCP1A6NGW2 1772 aa17.32■□□□□ 0.36
GEN1-205ENST00000532257 SYNMO15061 1565 aa17.31■□□□□ 0.36
GEN1-205ENST00000532257 FOXD1Q16676 465 aa17.3■□□□□ 0.36
GEN1-205ENST00000532257 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
GEN1-205ENST00000532257 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
GEN1-205ENST00000532257 UPF1Q92900 1129 aaKnown RBP eCLIP17.26■□□□□ 0.35
GEN1-205ENST00000532257 PLXNC1O60486 1568 aa17.25■□□□□ 0.35
GEN1-205ENST00000532257 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
GEN1-205ENST00000532257 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
GEN1-205ENST00000532257 IQGAP1P46940 1657 aa17.24■□□□□ 0.35
GEN1-205ENST00000532257 TROQ12816 1431 aaPredicted RBP17.23■□□□□ 0.35
GEN1-205ENST00000532257 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
GEN1-205ENST00000532257 MED14O60244 1454 aa17.22■□□□□ 0.35
GEN1-205ENST00000532257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.21■□□□□ 0.35
GEN1-205ENST00000532257 CLIP1P30622 1438 aa17.21■□□□□ 0.34
GEN1-205ENST00000532257 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
GEN1-205ENST00000532257 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
GEN1-205ENST00000532257 GGT6Q6P531 493 aa17.18■□□□□ 0.34
GEN1-205ENST00000532257 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
GEN1-205ENST00000532257 TNRQ92752 1358 aa17.17■□□□□ 0.34
GEN1-205ENST00000532257 A2MP01023 1474 aa17.17■□□□□ 0.34
GEN1-205ENST00000532257 XIRP1Q702N8 1843 aaKnown RBP17.17■□□□□ 0.34
GEN1-205ENST00000532257 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms