RNA–Protein interactions for RNA: ENST00000531790.5

SSR2-216, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 476 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-216ENST00000531790 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
SSR2-216ENST00000531790 IQSEC2Q5JU85 1478 aa11.96□□□□□ -0.49
SSR2-216ENST00000531790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
SSR2-216ENST00000531790 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
SSR2-216ENST00000531790 P3H3Q8IVL6 736 aa11.95□□□□□ -0.5
SSR2-216ENST00000531790 ATP10BO94823 1461 aa11.94□□□□□ -0.5
SSR2-216ENST00000531790 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
SSR2-216ENST00000531790 EFCAB5A4FU69 1503 aa11.91□□□□□ -0.5
SSR2-216ENST00000531790 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
SSR2-216ENST00000531790 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
SSR2-216ENST00000531790 RAPGEF2Q9Y4G8 1499 aa11.9□□□□□ -0.5
SSR2-216ENST00000531790 HECW1Q76N89 1606 aa11.9□□□□□ -0.5
SSR2-216ENST00000531790 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
SSR2-216ENST00000531790 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
SSR2-216ENST00000531790 ZMYM4Q5VZL5 1548 aa11.88□□□□□ -0.51
SSR2-216ENST00000531790 CTTNBP2Q8WZ74 1663 aa11.87□□□□□ -0.51
SSR2-216ENST00000531790 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
SSR2-216ENST00000531790 CAMSAP1Q5T5Y3 1602 aa11.86□□□□□ -0.51
SSR2-216ENST00000531790 C3P01024 1663 aa11.85□□□□□ -0.51
SSR2-216ENST00000531790 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
SSR2-216ENST00000531790 SETD1BQ9UPS6 1966 aaKnown RBP11.82□□□□□ -0.52
SSR2-216ENST00000531790 RGS17Q9UGC6 210 aaPredicted RBP11.82□□□□□ -0.52
SSR2-216ENST00000531790 ATP10AO60312 1499 aa11.82□□□□□ -0.52
SSR2-216ENST00000531790 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
SSR2-216ENST00000531790 CFAP74Q9C0B2 1584 aa11.81□□□□□ -0.52
SSR2-216ENST00000531790 MYT1LQ9UL68 1186 aa11.81□□□□□ -0.52
SSR2-216ENST00000531790 SCAPERQ9BY12 1400 aa11.8□□□□□ -0.52
SSR2-216ENST00000531790 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
SSR2-216ENST00000531790 EHMT2Q96KQ7 1210 aa11.78□□□□□ -0.52
SSR2-216ENST00000531790 RAPGEF6Q8TEU7 1601 aa11.78□□□□□ -0.52
SSR2-216ENST00000531790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.77□□□□□ -0.52
SSR2-216ENST00000531790 TOM1O60784 492 aa11.77□□□□□ -0.53
SSR2-216ENST00000531790 ESF1Q9H501 851 aaKnown RBP11.77□□□□□ -0.53
SSR2-216ENST00000531790 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
SSR2-216ENST00000531790 RANGAP1P46060 587 aaPredicted RBP11.76□□□□□ -0.53
SSR2-216ENST00000531790 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
SSR2-216ENST00000531790 PPP6R1Q9UPN7 881 aa11.74□□□□□ -0.53
SSR2-216ENST00000531790 NUP153P49790 1475 aaKnown RBP11.73□□□□□ -0.53
SSR2-216ENST00000531790 SUPT6HQ7KZ85 1726 aaKnown RBP11.73□□□□□ -0.53
SSR2-216ENST00000531790 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
SSR2-216ENST00000531790 ALKQ9UM73 1620 aa11.71□□□□□ -0.54
SSR2-216ENST00000531790 DIP2CQ9Y2E4 1556 aa11.7□□□□□ -0.54
SSR2-216ENST00000531790 UBTFP17480 764 aaKnown RBP11.69□□□□□ -0.54
SSR2-216ENST00000531790 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
SSR2-216ENST00000531790 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
SSR2-216ENST00000531790 ABCA6Q8N139 1617 aa11.68□□□□□ -0.54
SSR2-216ENST00000531790 MYO3AQ8NEV4 1616 aa11.67□□□□□ -0.54
SSR2-216ENST00000531790 ARHGAP35Q9NRY4 1499 aa11.66□□□□□ -0.54
SSR2-216ENST00000531790 PKD2Q13563 968 aa11.66□□□□□ -0.54
SSR2-216ENST00000531790 TCOF1Q13428 1488 aaKnown RBP11.65□□□□□ -0.54
SSR2-216ENST00000531790 SHANK2Q9UPX8 1470 aa11.64□□□□□ -0.55
SSR2-216ENST00000531790 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
SSR2-216ENST00000531790 CEP170BQ9Y4F5 1589 aaPredicted RBP11.64□□□□□ -0.55
SSR2-216ENST00000531790 CPS1P31327 1500 aa11.64□□□□□ -0.55
SSR2-216ENST00000531790 CDK13Q14004 1512 aaKnown RBP11.64□□□□□ -0.55
SSR2-216ENST00000531790 PLA2R1Q13018 1463 aa11.63□□□□□ -0.55
SSR2-216ENST00000531790 PLCH2O75038 1416 aa11.63□□□□□ -0.55
SSR2-216ENST00000531790 CLIP1P30622 1438 aa11.63□□□□□ -0.55
SSR2-216ENST00000531790 ZNF142P52746 1687 aaPredicted RBP11.62□□□□□ -0.55
SSR2-216ENST00000531790 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
SSR2-216ENST00000531790 ZMYM3Q14202 1370 aa11.62□□□□□ -0.55
SSR2-216ENST00000531790 ZNF518AQ6AHZ1 1483 aa11.62□□□□□ -0.55
SSR2-216ENST00000531790 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
SSR2-216ENST00000531790 NPATQ14207 1427 aa11.6□□□□□ -0.55
SSR2-216ENST00000531790 CLTCQ00610 1675 aaKnown RBP11.6□□□□□ -0.55
SSR2-216ENST00000531790 KDM5CP41229 1560 aa11.6□□□□□ -0.55
SSR2-216ENST00000531790 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSR2-216ENST00000531790 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
SSR2-216ENST00000531790 AGLP35573 1532 aa11.6□□□□□ -0.55
SSR2-216ENST00000531790 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
SSR2-216ENST00000531790 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
SSR2-216ENST00000531790 TRIM52Q96A61 297 aa11.58□□□□□ -0.56
SSR2-216ENST00000531790 ARHGAP5Q13017 1502 aa11.58□□□□□ -0.56
SSR2-216ENST00000531790 VWDEQ8N2E2 1590 aa11.58□□□□□ -0.56
SSR2-216ENST00000531790 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
SSR2-216ENST00000531790 POLR1AO95602 1720 aaPredicted RBP11.57□□□□□ -0.56
SSR2-216ENST00000531790 ATP1B4Q9UN42 357 aaPredicted RBP11.57□□□□□ -0.56
SSR2-216ENST00000531790 MROH2AA6NES4 1674 aa11.56□□□□□ -0.56
SSR2-216ENST00000531790 KIF14Q15058 1648 aa11.56□□□□□ -0.56
SSR2-216ENST00000531790 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
SSR2-216ENST00000531790 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
SSR2-216ENST00000531790 RNF17Q9BXT8 1623 aaKnown RBP11.53□□□□□ -0.56
SSR2-216ENST00000531790 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.56
SSR2-216ENST00000531790 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
SSR2-216ENST00000531790 KIDINS220Q9ULH0 1771 aa11.51□□□□□ -0.57
SSR2-216ENST00000531790 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
SSR2-216ENST00000531790 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
SSR2-216ENST00000531790 GGT6Q6P531 493 aa11.51□□□□□ -0.57
SSR2-216ENST00000531790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.51□□□□□ -0.57
SSR2-216ENST00000531790 ITSN2Q9NZM3 1697 aa11.49□□□□□ -0.57
SSR2-216ENST00000531790 NPHP4O75161 1426 aaPredicted RBP11.48□□□□□ -0.57
SSR2-216ENST00000531790 LRRIQ1Q96JM4 1722 aa11.47□□□□□ -0.57
SSR2-216ENST00000531790 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
SSR2-216ENST00000531790 ANKLE2Q86XL3 938 aa11.46□□□□□ -0.57
SSR2-216ENST00000531790 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.58
SSR2-216ENST00000531790 ABCC1P33527 1531 aa11.45□□□□□ -0.58
SSR2-216ENST00000531790 CASKIN1Q8WXD9 1431 aa11.45□□□□□ -0.58
SSR2-216ENST00000531790 ZNF777Q9ULD5 760 aaPredicted RBP11.44□□□□□ -0.58
SSR2-216ENST00000531790 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
SSR2-216ENST00000531790 SYNMO15061 1565 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms