RNA–Protein interactions for RNA: ENST00000531715.5

AP003557.1-201, humanhuman

TSL 3 BASIC

Gene AP003557.1, Length 585 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003557.1-201ENST00000531715 RNF25Q96BH1 459 aaPredicted RBP9.06□□□□□ -0.96
AP003557.1-201ENST00000531715 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
AP003557.1-201ENST00000531715 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
AP003557.1-201ENST00000531715 CHRM1P11229 460 aaPredicted RBP9.05□□□□□ -0.96
AP003557.1-201ENST00000531715 PAXIP1Q6ZW49 1069 aaPredicted RBP9.05□□□□□ -0.96
AP003557.1-201ENST00000531715 ZNF467Q7Z7K2 595 aaPredicted RBP9.05□□□□□ -0.96
AP003557.1-201ENST00000531715 VSIG10Q8N0Z9 540 aa9.04□□□□□ -0.96
AP003557.1-201ENST00000531715 FANCD2Q9BXW9 1451 aa9.03□□□□□ -0.96
AP003557.1-201ENST00000531715 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
AP003557.1-201ENST00000531715 CFAP44Q96MT7 982 aa9.03□□□□□ -0.96
AP003557.1-201ENST00000531715 CUX2O14529 1486 aa9.02□□□□□ -0.96
AP003557.1-201ENST00000531715 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.97
AP003557.1-201ENST00000531715 ST18O60284 1047 aa9.01□□□□□ -0.97
AP003557.1-201ENST00000531715 HS6ST3Q8IZP7 471 aa9□□□□□ -0.97
AP003557.1-201ENST00000531715 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
AP003557.1-201ENST00000531715 WDR62O43379 1518 aa9□□□□□ -0.97
AP003557.1-201ENST00000531715 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
AP003557.1-201ENST00000531715 KDM2AQ9Y2K7 1162 aa8.99□□□□□ -0.97
AP003557.1-201ENST00000531715 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
AP003557.1-201ENST00000531715 CDAN1Q8IWY9 1227 aa8.98□□□□□ -0.97
AP003557.1-201ENST00000531715 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
AP003557.1-201ENST00000531715 SNPHO15079 494 aa8.96□□□□□ -0.98
AP003557.1-201ENST00000531715 PSEN1P49768 467 aa8.96□□□□□ -0.98
AP003557.1-201ENST00000531715 PDCD7Q8N8D1 485 aaKnown RBP8.96□□□□□ -0.98
AP003557.1-201ENST00000531715 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
AP003557.1-201ENST00000531715 DNAJC5Q9H3Z4 198 aa8.95□□□□□ -0.98
AP003557.1-201ENST00000531715 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
AP003557.1-201ENST00000531715 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
AP003557.1-201ENST00000531715 RIOK3O14730 519 aaKnown RBP8.94□□□□□ -0.98
AP003557.1-201ENST00000531715 BCANQ96GW7 911 aa8.93□□□□□ -0.98
AP003557.1-201ENST00000531715 TMEM121BQ9BXQ6 578 aaPredicted RBP8.93□□□□□ -0.98
AP003557.1-201ENST00000531715 URB2Q14146 1524 aaKnown RBP8.92□□□□□ -0.98
AP003557.1-201ENST00000531715 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
AP003557.1-201ENST00000531715 TSHZ2Q9NRE2 1034 aa8.92□□□□□ -0.98
AP003557.1-201ENST00000531715 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.98
AP003557.1-201ENST00000531715 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
AP003557.1-201ENST00000531715 TOPBP1Q92547 1522 aa8.9□□□□□ -0.98
AP003557.1-201ENST00000531715 NKX1-1Q15270 411 aaPredicted RBP8.89□□□□□ -0.99
AP003557.1-201ENST00000531715 ILDR1Q86SU0 546 aaPredicted RBP8.89□□□□□ -0.99
AP003557.1-201ENST00000531715 TAOK2Q9UL54 1235 aa8.88□□□□□ -0.99
AP003557.1-201ENST00000531715 VGFO15240 615 aaPredicted RBP8.87□□□□□ -0.99
AP003557.1-201ENST00000531715 BIVM-ERCC5R4GMW8 1640 aa8.85□□□□□ -0.99
AP003557.1-201ENST00000531715 STK25O00506 426 aa8.85□□□□□ -0.99
AP003557.1-201ENST00000531715 CUX1P39880 1505 aa8.85□□□□□ -0.99
AP003557.1-201ENST00000531715 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
AP003557.1-201ENST00000531715 WDR97A6NE52 1622 aa8.84□□□□□ -0.99
AP003557.1-201ENST00000531715 TOP2BQ02880 1626 aa8.84□□□□□ -0.99
AP003557.1-201ENST00000531715 CABP2Q9NPB3 220 aa8.84□□□□□ -0.99
AP003557.1-201ENST00000531715 POLA1P09884 1462 aaPredicted RBP8.83□□□□□ -1
AP003557.1-201ENST00000531715 WRNQ14191 1432 aaPredicted RBP eCLIP8.82□□□□□ -1
AP003557.1-201ENST00000531715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.82□□□□□ -1
AP003557.1-201ENST00000531715 GTPBP6O43824 516 aaPredicted RBP8.82□□□□□ -1
AP003557.1-201ENST00000531715 DPY19L2Q6NUT2 758 aa8.82□□□□□ -1
AP003557.1-201ENST00000531715 MARVELD3Q96A59 401 aa8.82□□□□□ -1
AP003557.1-201ENST00000531715 ZFP91Q96JP5 570 aaPredicted RBP8.82□□□□□ -1
AP003557.1-201ENST00000531715 TARBP1Q13395 1621 aaKnown RBP8.82□□□□□ -1
AP003557.1-201ENST00000531715 FGD5Q6ZNL6 1462 aa8.82□□□□□ -1
AP003557.1-201ENST00000531715 SYNJ1O43426 1573 aa8.81□□□□□ -1
AP003557.1-201ENST00000531715 G3V3G9 751 aa8.8□□□□□ -1
AP003557.1-201ENST00000531715 BCL11BQ9C0K0 894 aaPredicted RBP8.8□□□□□ -1
AP003557.1-201ENST00000531715 EIF4G3O43432 1585 aaKnown RBP8.8□□□□□ -1
AP003557.1-201ENST00000531715 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
AP003557.1-201ENST00000531715 STK24Q9Y6E0 443 aa8.78□□□□□ -1
AP003557.1-201ENST00000531715 EMP3P54852 163 aa8.77□□□□□ -1.01
AP003557.1-201ENST00000531715 SPNS2Q8IVW8 549 aa8.76□□□□□ -1.01
AP003557.1-201ENST00000531715 ABCA10Q8WWZ4 1543 aa8.75□□□□□ -1.01
AP003557.1-201ENST00000531715 SOGA1O94964 1423 aa8.75□□□□□ -1.01
AP003557.1-201ENST00000531715 PRKCSHP14314 528 aaPredicted RBP8.75□□□□□ -1.01
AP003557.1-201ENST00000531715 MMRN1Q13201 1228 aa8.75□□□□□ -1.01
AP003557.1-201ENST00000531715 ABCA5Q8WWZ7 1642 aa8.74□□□□□ -1.01
AP003557.1-201ENST00000531715 PBRM1Q86U86 1689 aa8.74□□□□□ -1.01
AP003557.1-201ENST00000531715 ZNF608Q9ULD9 1512 aaPredicted RBP8.74□□□□□ -1.01
AP003557.1-201ENST00000531715 RAD54L2Q9Y4B4 1467 aa8.73□□□□□ -1.01
AP003557.1-201ENST00000531715 EFCAB3Q8N7B9 438 aa8.73□□□□□ -1.01
AP003557.1-201ENST00000531715 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
AP003557.1-201ENST00000531715 FAM205CA6NFA0 338 aa8.71□□□□□ -1.02
AP003557.1-201ENST00000531715 POTEB3A0JP26 581 aa8.7□□□□□ -1.02
AP003557.1-201ENST00000531715 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
AP003557.1-201ENST00000531715 POTEBQ6S5H4 581 aa8.7□□□□□ -1.02
AP003557.1-201ENST00000531715 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
AP003557.1-201ENST00000531715 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
AP003557.1-201ENST00000531715 RYDENQ9NUL5 291 aaKnown RBP8.69□□□□□ -1.02
AP003557.1-201ENST00000531715 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
AP003557.1-201ENST00000531715 CHD1O14646 1710 aa8.68□□□□□ -1.02
AP003557.1-201ENST00000531715 SOX12O15370 315 aa8.68□□□□□ -1.02
AP003557.1-201ENST00000531715 AQRO60306 1485 aaKnown RBP eCLIP8.68□□□□□ -1.02
AP003557.1-201ENST00000531715 ERICH3Q5RHP9 1530 aa8.68□□□□□ -1.02
AP003557.1-201ENST00000531715 DOK7Q18PE1 504 aa8.67□□□□□ -1.02
AP003557.1-201ENST00000531715 TPRNQ4KMQ1 711 aa8.67□□□□□ -1.02
AP003557.1-201ENST00000531715 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
AP003557.1-201ENST00000531715 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
AP003557.1-201ENST00000531715 TDRD9Q8NDG6 1382 aaKnown RBP8.66□□□□□ -1.02
AP003557.1-201ENST00000531715 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
AP003557.1-201ENST00000531715 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
AP003557.1-201ENST00000531715 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
AP003557.1-201ENST00000531715 CUL7Q14999 1698 aa8.65□□□□□ -1.02
AP003557.1-201ENST00000531715 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
AP003557.1-201ENST00000531715 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
AP003557.1-201ENST00000531715 NBR1Q14596 966 aa8.64□□□□□ -1.03
AP003557.1-201ENST00000531715 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms