RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
CHMP4A-205ENST00000531158 ZFYVE16Q7Z3T8 1539 aa15.57■□□□□ 0.08
CHMP4A-205ENST00000531158 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
CHMP4A-205ENST00000531158 KIF14Q15058 1648 aa15.54■□□□□ 0.08
CHMP4A-205ENST00000531158 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
CHMP4A-205ENST00000531158 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
CHMP4A-205ENST00000531158 MAGI2Q86UL8 1455 aa15.5■□□□□ 0.07
CHMP4A-205ENST00000531158 PLCH2O75038 1416 aa15.5■□□□□ 0.07
CHMP4A-205ENST00000531158 ARHGEF12Q9NZN5 1544 aa15.48■□□□□ 0.07
CHMP4A-205ENST00000531158 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
CHMP4A-205ENST00000531158 CDC42BPBQ9Y5S2 1711 aa15.48■□□□□ 0.07
CHMP4A-205ENST00000531158 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
CHMP4A-205ENST00000531158 SCAPERQ9BY12 1400 aa15.47■□□□□ 0.07
CHMP4A-205ENST00000531158 KDM5CP41229 1560 aa15.45■□□□□ 0.06
CHMP4A-205ENST00000531158 STRCQ7RTU9 1775 aa15.44■□□□□ 0.06
CHMP4A-205ENST00000531158 DMRT2Q9Y5R5 561 aa15.43■□□□□ 0.06
CHMP4A-205ENST00000531158 ABCA6Q8N139 1617 aa15.43■□□□□ 0.06
CHMP4A-205ENST00000531158 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
CHMP4A-205ENST00000531158 ATP10AO60312 1499 aa15.42■□□□□ 0.06
CHMP4A-205ENST00000531158 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
CHMP4A-205ENST00000531158 PREX2Q70Z35 1606 aa15.41■□□□□ 0.06
CHMP4A-205ENST00000531158 C9orf84Q5VXU9 1444 aa15.41■□□□□ 0.06
CHMP4A-205ENST00000531158 MLECQ14165 292 aa15.4■□□□□ 0.06
CHMP4A-205ENST00000531158 C3P01024 1663 aa15.39■□□□□ 0.05
CHMP4A-205ENST00000531158 ITSN2Q9NZM3 1697 aa15.39■□□□□ 0.05
CHMP4A-205ENST00000531158 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
CHMP4A-205ENST00000531158 CDC42BPAQ5VT25 1732 aa15.39■□□□□ 0.05
CHMP4A-205ENST00000531158 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
CHMP4A-205ENST00000531158 REREQ9P2R6 1566 aa15.38■□□□□ 0.05
CHMP4A-205ENST00000531158 TROQ12816 1431 aaPredicted RBP15.38■□□□□ 0.05
CHMP4A-205ENST00000531158 ZNF518AQ6AHZ1 1483 aa15.38■□□□□ 0.05
CHMP4A-205ENST00000531158 ABCC1P33527 1531 aa15.36■□□□□ 0.05
CHMP4A-205ENST00000531158 KIDINS220Q9ULH0 1771 aa15.36■□□□□ 0.05
CHMP4A-205ENST00000531158 SETD1BQ9UPS6 1966 aaKnown RBP15.35■□□□□ 0.05
CHMP4A-205ENST00000531158 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
CHMP4A-205ENST00000531158 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
CHMP4A-205ENST00000531158 CEBPAP49715 358 aaPredicted RBP15.33■□□□□ 0.04
CHMP4A-205ENST00000531158 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
CHMP4A-205ENST00000531158 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.04
CHMP4A-205ENST00000531158 MLH3Q9UHC1 1453 aa15.32■□□□□ 0.04
CHMP4A-205ENST00000531158 TRAPPC8Q9Y2L5 1435 aa15.31■□□□□ 0.04
CHMP4A-205ENST00000531158 CLIP1P30622 1438 aa15.3■□□□□ 0.04
CHMP4A-205ENST00000531158 AGLP35573 1532 aa15.29■□□□□ 0.04
CHMP4A-205ENST00000531158 SAMD9LQ8IVG5 1584 aa15.28■□□□□ 0.04
CHMP4A-205ENST00000531158 CASKIN1Q8WXD9 1431 aa15.28■□□□□ 0.04
CHMP4A-205ENST00000531158 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
CHMP4A-205ENST00000531158 CDK11AQ9UQ88 783 aaPredicted RBP15.27■□□□□ 0.04
CHMP4A-205ENST00000531158 CCDC18Q5T9S5 1454 aa15.27■□□□□ 0.03
CHMP4A-205ENST00000531158 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
CHMP4A-205ENST00000531158 SUPT6HQ7KZ85 1726 aaKnown RBP15.25■□□□□ 0.03
CHMP4A-205ENST00000531158 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
CHMP4A-205ENST00000531158 PTPRTO14522 1441 aa15.25■□□□□ 0.03
CHMP4A-205ENST00000531158 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
CHMP4A-205ENST00000531158 LTBP4Q8N2S1 1624 aa15.24■□□□□ 0.03
CHMP4A-205ENST00000531158 SYCP2Q9BX26 1530 aa15.23■□□□□ 0.03
CHMP4A-205ENST00000531158 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
CHMP4A-205ENST00000531158 FYCO1Q9BQS8 1478 aa15.22■□□□□ 0.03
CHMP4A-205ENST00000531158 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
CHMP4A-205ENST00000531158 PLXNC1O60486 1568 aa15.21■□□□□ 0.03
CHMP4A-205ENST00000531158 CLTCQ00610 1675 aaKnown RBP15.21■□□□□ 0.03
CHMP4A-205ENST00000531158 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
CHMP4A-205ENST00000531158 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
CHMP4A-205ENST00000531158 ATP7AQ04656 1500 aa15.17■□□□□ 0.02
CHMP4A-205ENST00000531158 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
CHMP4A-205ENST00000531158 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
CHMP4A-205ENST00000531158 MYT1LQ9UL68 1186 aa15.16■□□□□ 0.02
CHMP4A-205ENST00000531158 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
CHMP4A-205ENST00000531158 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-205ENST00000531158 ADGBQ8N7X0 1667 aa15.14■□□□□ 0.01
CHMP4A-205ENST00000531158 PHF23Q9BUL5 403 aaPredicted RBP15.14■□□□□ 0.01
CHMP4A-205ENST00000531158 CNTLNQ9NXG0 1405 aa15.14■□□□□ 0.01
CHMP4A-205ENST00000531158 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
CHMP4A-205ENST00000531158 NPATQ14207 1427 aa15.12■□□□□ 0.01
CHMP4A-205ENST00000531158 HSPA1LP34931 641 aa15.11■□□□□ 0.01
CHMP4A-205ENST00000531158 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
CHMP4A-205ENST00000531158 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
CHMP4A-205ENST00000531158 ZNF777Q9ULD5 760 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-205ENST00000531158 CEP170BQ9Y4F5 1589 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-205ENST00000531158 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
CHMP4A-205ENST00000531158 A2MP01023 1474 aa15.09■□□□□ 0.01
CHMP4A-205ENST00000531158 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
CHMP4A-205ENST00000531158 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
CHMP4A-205ENST00000531158 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
CHMP4A-205ENST00000531158 PTPRKQ15262 1439 aa15.07■□□□□ 0
CHMP4A-205ENST00000531158 PIP4K2BP78356 416 aa15.06■□□□□ 0
CHMP4A-205ENST00000531158 ESF1Q9H501 851 aaKnown RBP15.06■□□□□ 0
CHMP4A-205ENST00000531158 TCOF1Q13428 1488 aaKnown RBP15.06■□□□□ 0
CHMP4A-205ENST00000531158 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
CHMP4A-205ENST00000531158 MBD5Q9P267 1494 aa15.06■□□□□ 0
CHMP4A-205ENST00000531158 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
CHMP4A-205ENST00000531158 DNMT1P26358 1616 aaKnown RBP15.04■□□□□ -0
CHMP4A-205ENST00000531158 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
CHMP4A-205ENST00000531158 PLA2R1Q13018 1463 aa15.04■□□□□ -0
CHMP4A-205ENST00000531158 ZNF644Q9H582 1327 aaPredicted RBP15.04■□□□□ -0
CHMP4A-205ENST00000531158 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
CHMP4A-205ENST00000531158 NCKAP5LQ9HCH0 1330 aa15.02■□□□□ -0
CHMP4A-205ENST00000531158 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
CHMP4A-205ENST00000531158 NEURL4Q96JN8 1562 aa15.02□□□□□ -0.01
CHMP4A-205ENST00000531158 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
CHMP4A-205ENST00000531158 TOM1O60784 492 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 575.9 ms