RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 UHRF1BP1Q6BDS2 1440 aa12.87□□□□□ -0.35
PPM1A-206ENST00000531143 IQGAP2Q13576 1575 aa12.87□□□□□ -0.35
PPM1A-206ENST00000531143 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
PPM1A-206ENST00000531143 ZNF335Q9H4Z2 1342 aaPredicted RBP12.86□□□□□ -0.35
PPM1A-206ENST00000531143 RGS17Q9UGC6 210 aaPredicted RBP12.86□□□□□ -0.35
PPM1A-206ENST00000531143 NEO1Q92859 1461 aa12.85□□□□□ -0.35
PPM1A-206ENST00000531143 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
PPM1A-206ENST00000531143 PIP4K2BP78356 416 aa12.82□□□□□ -0.36
PPM1A-206ENST00000531143 NCOA1Q15788 1441 aa12.81□□□□□ -0.36
PPM1A-206ENST00000531143 FER1L4A9Z1Z3 1794 aa12.81□□□□□ -0.36
PPM1A-206ENST00000531143 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
PPM1A-206ENST00000531143 KIAA0556O60303 1618 aa12.78□□□□□ -0.36
PPM1A-206ENST00000531143 UGGT2Q9NYU1 1516 aa12.78□□□□□ -0.36
PPM1A-206ENST00000531143 FHOD3Q2V2M9 1422 aa12.78□□□□□ -0.36
PPM1A-206ENST00000531143 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
PPM1A-206ENST00000531143 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
PPM1A-206ENST00000531143 DENND4BO75064 1496 aaPredicted RBP12.76□□□□□ -0.37
PPM1A-206ENST00000531143 ABCA8O94911 1581 aa12.75□□□□□ -0.37
PPM1A-206ENST00000531143 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
PPM1A-206ENST00000531143 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
PPM1A-206ENST00000531143 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
PPM1A-206ENST00000531143 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
PPM1A-206ENST00000531143 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
PPM1A-206ENST00000531143 TOM1O60784 492 aa12.72□□□□□ -0.37
PPM1A-206ENST00000531143 SETD1BQ9UPS6 1966 aaKnown RBP12.71□□□□□ -0.37
PPM1A-206ENST00000531143 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
PPM1A-206ENST00000531143 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.38
PPM1A-206ENST00000531143 NCKAP5LQ9HCH0 1330 aa12.7□□□□□ -0.38
PPM1A-206ENST00000531143 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
PPM1A-206ENST00000531143 ATP10BO94823 1461 aa12.67□□□□□ -0.38
PPM1A-206ENST00000531143 MAGI2Q86UL8 1455 aa12.67□□□□□ -0.38
PPM1A-206ENST00000531143 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
PPM1A-206ENST00000531143 APLP2Q06481 763 aa12.66□□□□□ -0.38
PPM1A-206ENST00000531143 TRAPPC8Q9Y2L5 1435 aa12.65□□□□□ -0.38
PPM1A-206ENST00000531143 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
PPM1A-206ENST00000531143 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
PPM1A-206ENST00000531143 ATP10AO60312 1499 aa12.63□□□□□ -0.39
PPM1A-206ENST00000531143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
PPM1A-206ENST00000531143 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
PPM1A-206ENST00000531143 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
PPM1A-206ENST00000531143 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
PPM1A-206ENST00000531143 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
PPM1A-206ENST00000531143 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
PPM1A-206ENST00000531143 PKD2Q13563 968 aa12.59□□□□□ -0.39
PPM1A-206ENST00000531143 C3P01024 1663 aa12.58□□□□□ -0.4
PPM1A-206ENST00000531143 TCOF1Q13428 1488 aaKnown RBP12.58□□□□□ -0.4
PPM1A-206ENST00000531143 PTPRKQ15262 1439 aa12.56□□□□□ -0.4
PPM1A-206ENST00000531143 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
PPM1A-206ENST00000531143 CPS1P31327 1500 aa12.54□□□□□ -0.4
PPM1A-206ENST00000531143 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
PPM1A-206ENST00000531143 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
PPM1A-206ENST00000531143 CAPN15O75808 1086 aa12.52□□□□□ -0.4
PPM1A-206ENST00000531143 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.41
PPM1A-206ENST00000531143 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
PPM1A-206ENST00000531143 CFAP74Q9C0B2 1584 aa12.5□□□□□ -0.41
PPM1A-206ENST00000531143 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
PPM1A-206ENST00000531143 NPATQ14207 1427 aa12.49□□□□□ -0.41
PPM1A-206ENST00000531143 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
PPM1A-206ENST00000531143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.424e-7■□□□□ 9.3
PPM1A-206ENST00000531143 SLC4A1APQ9BWU0 796 aaKnown RBP12.45□□□□□ -0.42
PPM1A-206ENST00000531143 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
PPM1A-206ENST00000531143 CNTLNQ9NXG0 1405 aa12.44□□□□□ -0.42
PPM1A-206ENST00000531143 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
PPM1A-206ENST00000531143 AGLP35573 1532 aa12.43□□□□□ -0.42
PPM1A-206ENST00000531143 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
PPM1A-206ENST00000531143 ZNF142P52746 1687 aaPredicted RBP12.41□□□□□ -0.42
PPM1A-206ENST00000531143 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
PPM1A-206ENST00000531143 VWDEQ8N2E2 1590 aa12.41□□□□□ -0.42
PPM1A-206ENST00000531143 DIP2CQ9Y2E4 1556 aa12.41□□□□□ -0.42
PPM1A-206ENST00000531143 REREQ9P2R6 1566 aa12.4□□□□□ -0.42
PPM1A-206ENST00000531143 DSG3P32926 999 aa12.4□□□□□ -0.42
PPM1A-206ENST00000531143 ZMYM3Q14202 1370 aa12.4□□□□□ -0.42
PPM1A-206ENST00000531143 NUP153P49790 1475 aaKnown RBP12.39□□□□□ -0.43
PPM1A-206ENST00000531143 MYCNP04198 464 aaPredicted RBP12.39□□□□□ -0.43
PPM1A-206ENST00000531143 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
PPM1A-206ENST00000531143 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
PPM1A-206ENST00000531143 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
PPM1A-206ENST00000531143 PLEKHD1A6NEE1 506 aa12.38□□□□□ -0.43
PPM1A-206ENST00000531143 TRIM52Q96A61 297 aa12.38□□□□□ -0.43
PPM1A-206ENST00000531143 PLCH2O75038 1416 aa12.37□□□□□ -0.43
PPM1A-206ENST00000531143 ZNF518AQ6AHZ1 1483 aa12.37□□□□□ -0.43
PPM1A-206ENST00000531143 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
PPM1A-206ENST00000531143 KDM5CP41229 1560 aa12.36□□□□□ -0.43
PPM1A-206ENST00000531143 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
PPM1A-206ENST00000531143 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
PPM1A-206ENST00000531143 RAPGEF6Q8TEU7 1601 aa12.35□□□□□ -0.43
PPM1A-206ENST00000531143 RNF17Q9BXT8 1623 aaKnown RBP12.35□□□□□ -0.43
PPM1A-206ENST00000531143 ABCA6Q8N139 1617 aa12.33□□□□□ -0.44
PPM1A-206ENST00000531143 MYT1LQ9UL68 1186 aa12.33□□□□□ -0.44
PPM1A-206ENST00000531143 CTTNBP2Q8WZ74 1663 aa12.33□□□□□ -0.44
PPM1A-206ENST00000531143 SETBP1Q9Y6X0 1596 aa12.31□□□□□ -0.44
PPM1A-206ENST00000531143 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
PPM1A-206ENST00000531143 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
PPM1A-206ENST00000531143 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
PPM1A-206ENST00000531143 SUPT6HQ7KZ85 1726 aaKnown RBP12.3□□□□□ -0.44
PPM1A-206ENST00000531143 EFCAB2Q5VUJ9 269 aa12.3□□□□□ -0.44
PPM1A-206ENST00000531143 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
PPM1A-206ENST00000531143 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
PPM1A-206ENST00000531143 MLH3Q9UHC1 1453 aa12.29□□□□□ -0.44
PPM1A-206ENST00000531143 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms