RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
USP35-206ENST00000530535 PPP1R15AO75807 674 aaPredicted RBP22.16■■□□□ 1.14
USP35-206ENST00000530535 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
USP35-206ENST00000530535 HFM1A2PYH4 1435 aa22.14■■□□□ 1.14
USP35-206ENST00000530535 TCOF1Q13428 1488 aaKnown RBP22.13■■□□□ 1.13
USP35-206ENST00000530535 DDX10Q13206 875 aaKnown RBP22.12■■□□□ 1.13
USP35-206ENST00000530535 ABCC10Q5T3U5 1492 aa22.12■■□□□ 1.13
USP35-206ENST00000530535 GPATCH8Q9UKJ3 1502 aaKnown RBP22.12■■□□□ 1.13
USP35-206ENST00000530535 MYT1Q01538 1121 aa22.09■■□□□ 1.13
USP35-206ENST00000530535 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
USP35-206ENST00000530535 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
USP35-206ENST00000530535 NAIPQ13075 1403 aa22.07■■□□□ 1.12
USP35-206ENST00000530535 NPM1P06748 294 aaKnown RBP eCLIP22.04■■□□□ 1.12
USP35-206ENST00000530535 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
USP35-206ENST00000530535 CDC42BPAQ5VT25 1732 aa22.03■■□□□ 1.12
USP35-206ENST00000530535 RIMBP3CA6NJZ7 1639 aa22.02■■□□□ 1.12
USP35-206ENST00000530535 RIMBP3BA6NNM3 1639 aa22.02■■□□□ 1.12
USP35-206ENST00000530535 RIMBP3Q9UFD9 1639 aa22.02■■□□□ 1.12
USP35-206ENST00000530535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
USP35-206ENST00000530535 ZNF777Q9ULD5 760 aaPredicted RBP22.01■■□□□ 1.11
USP35-206ENST00000530535 TONSLQ96HA7 1378 aa22■■□□□ 1.11
USP35-206ENST00000530535 CYB5RLQ6IPT4 315 aa22■■□□□ 1.11
USP35-206ENST00000530535 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
USP35-206ENST00000530535 WDR7Q9Y4E6 1490 aa22■■□□□ 1.11
USP35-206ENST00000530535 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
USP35-206ENST00000530535 TTC37Q6PGP7 1564 aa21.98■■□□□ 1.11
USP35-206ENST00000530535 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
USP35-206ENST00000530535 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
USP35-206ENST00000530535 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.11
USP35-206ENST00000530535 PREX2Q70Z35 1606 aa21.94■■□□□ 1.1
USP35-206ENST00000530535 DAPK1P53355 1430 aa21.94■■□□□ 1.1
USP35-206ENST00000530535 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
USP35-206ENST00000530535 ABCC5O15440 1437 aa21.94■■□□□ 1.1
USP35-206ENST00000530535 CDC42BPBQ9Y5S2 1711 aa21.93■■□□□ 1.1
USP35-206ENST00000530535 DNMT1P26358 1616 aaKnown RBP21.93■■□□□ 1.1
USP35-206ENST00000530535 TSHZ2Q9NRE2 1034 aa21.92■■□□□ 1.1
USP35-206ENST00000530535 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
USP35-206ENST00000530535 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
USP35-206ENST00000530535 PLCH2O75038 1416 aa21.9■■□□□ 1.1
USP35-206ENST00000530535 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.1
USP35-206ENST00000530535 ANP32CO43423 234 aa21.89■■□□□ 1.09
USP35-206ENST00000530535 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
USP35-206ENST00000530535 RRP7BPQ9NSQ0 103 aa21.87■■□□□ 1.09
USP35-206ENST00000530535 SAMD9LQ8IVG5 1584 aa21.86■■□□□ 1.09
USP35-206ENST00000530535 KDM6BO15054 1643 aa21.86■■□□□ 1.09
USP35-206ENST00000530535 HNRNPMP52272 730 aaKnown RBP eCLIP21.85■■□□□ 1.09
USP35-206ENST00000530535 EFCAB2Q5VUJ9 269 aa21.85■■□□□ 1.09
USP35-206ENST00000530535 ROCK1Q13464 1354 aa21.84■■□□□ 1.09
USP35-206ENST00000530535 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
USP35-206ENST00000530535 MBD5Q9P267 1494 aa21.82■■□□□ 1.08
USP35-206ENST00000530535 RSPH4AQ5TD94 716 aa21.82■■□□□ 1.08
USP35-206ENST00000530535 ARAP3Q8WWN8 1544 aa21.81■■□□□ 1.08
USP35-206ENST00000530535 FKBP8Q14318 412 aa21.81■■□□□ 1.08
USP35-206ENST00000530535 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
USP35-206ENST00000530535 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
USP35-206ENST00000530535 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
USP35-206ENST00000530535 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
USP35-206ENST00000530535 KIAA1107Q9UPP5 1409 aa21.8■■□□□ 1.08
USP35-206ENST00000530535 CROCC2H7BZ55 1655 aa21.79■■□□□ 1.08
USP35-206ENST00000530535 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
USP35-206ENST00000530535 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
USP35-206ENST00000530535 NCOA1Q15788 1441 aa21.77■■□□□ 1.08
USP35-206ENST00000530535 BCANQ96GW7 911 aa21.77■■□□□ 1.08
USP35-206ENST00000530535 SHANK2Q9UPX8 1470 aa21.77■■□□□ 1.08
USP35-206ENST00000530535 ADGRL2O95490 1459 aa21.76■■□□□ 1.07
USP35-206ENST00000530535 CCDC141Q6ZP82 1450 aa21.76■■□□□ 1.07
USP35-206ENST00000530535 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
USP35-206ENST00000530535 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
USP35-206ENST00000530535 ADGBQ8N7X0 1667 aa21.74■■□□□ 1.07
USP35-206ENST00000530535 FANCAO15360 1455 aa21.73■■□□□ 1.07
USP35-206ENST00000530535 ARHGEF12Q9NZN5 1544 aa21.73■■□□□ 1.07
USP35-206ENST00000530535 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
USP35-206ENST00000530535 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
USP35-206ENST00000530535 ABCC1P33527 1531 aa21.71■■□□□ 1.07
USP35-206ENST00000530535 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
USP35-206ENST00000530535 MPHOSPH9Q99550 1183 aa21.68■■□□□ 1.06
USP35-206ENST00000530535 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
USP35-206ENST00000530535 NEFLP07196 543 aa21.66■■□□□ 1.06
USP35-206ENST00000530535 MAST1Q9Y2H9 1570 aa21.65■■□□□ 1.06
USP35-206ENST00000530535 ADGRL1O94910 1474 aa21.63■■□□□ 1.05
USP35-206ENST00000530535 KIF15Q9NS87 1388 aa21.63■■□□□ 1.05
USP35-206ENST00000530535 GLI2P10070 1586 aa21.63■■□□□ 1.05
USP35-206ENST00000530535 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
USP35-206ENST00000530535 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
USP35-206ENST00000530535 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
USP35-206ENST00000530535 CNTLNQ9NXG0 1405 aa21.62■■□□□ 1.05
USP35-206ENST00000530535 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
USP35-206ENST00000530535 TEX14Q8IWB6 1497 aa21.62■■□□□ 1.05
USP35-206ENST00000530535 ANKRD30BQ9BXX2 1392 aa21.61■■□□□ 1.05
USP35-206ENST00000530535 FAM69CQ0P6D2 419 aa21.61■■□□□ 1.05
USP35-206ENST00000530535 L3MBTL2Q969R5 705 aa21.61■■□□□ 1.05
USP35-206ENST00000530535 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.05
USP35-206ENST00000530535 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
USP35-206ENST00000530535 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
USP35-206ENST00000530535 FOXD1Q16676 465 aa21.58■■□□□ 1.05
USP35-206ENST00000530535 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.05
USP35-206ENST00000530535 DIP2BQ9P265 1576 aa21.58■■□□□ 1.04
USP35-206ENST00000530535 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
USP35-206ENST00000530535 RTEL1-TNFRSF6BF6WH68 1400 aa21.56■■□□□ 1.04
USP35-206ENST00000530535 NEO1Q92859 1461 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms