RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 SCAPERQ9BY12 1400 aa14.49□□□□□ -0.09
USP35-205ENST00000530521 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
USP35-205ENST00000530521 EFCAB5A4FU69 1503 aa14.45□□□□□ -0.1
USP35-205ENST00000530521 ZMYM4Q5VZL5 1548 aa14.45□□□□□ -0.1
USP35-205ENST00000530521 PLCH2O75038 1416 aa14.44□□□□□ -0.1
USP35-205ENST00000530521 MYT1LQ9UL68 1186 aa14.44□□□□□ -0.1
USP35-205ENST00000530521 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
USP35-205ENST00000530521 ATP10AO60312 1499 aa14.43□□□□□ -0.1
USP35-205ENST00000530521 ILDR2Q71H61 639 aa14.42□□□□□ -0.1
USP35-205ENST00000530521 MAGI2Q86UL8 1455 aa14.42□□□□□ -0.1
USP35-205ENST00000530521 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
USP35-205ENST00000530521 UBTFP17480 764 aaKnown RBP14.41□□□□□ -0.1
USP35-205ENST00000530521 EFCAB2Q5VUJ9 269 aa14.41□□□□□ -0.1
USP35-205ENST00000530521 MYO5CQ9NQX4 1742 aa14.4□□□□□ -0.1
USP35-205ENST00000530521 PREX1Q8TCU6 1659 aa14.39□□□□□ -0.11
USP35-205ENST00000530521 ARHGEF12Q9NZN5 1544 aa14.39□□□□□ -0.11
USP35-205ENST00000530521 EEA1Q15075 1411 aa14.39□□□□□ -0.11
USP35-205ENST00000530521 KIF14Q15058 1648 aa14.38□□□□□ -0.11
USP35-205ENST00000530521 SETD1BQ9UPS6 1966 aaKnown RBP14.37□□□□□ -0.11
USP35-205ENST00000530521 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
USP35-205ENST00000530521 DISP3Q9P2K9 1392 aa14.36□□□□□ -0.11
USP35-205ENST00000530521 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
USP35-205ENST00000530521 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
USP35-205ENST00000530521 CDC42BPBQ9Y5S2 1711 aa14.33□□□□□ -0.12
USP35-205ENST00000530521 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
USP35-205ENST00000530521 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
USP35-205ENST00000530521 ARHGAP35Q9NRY4 1499 aa14.32□□□□□ -0.12
USP35-205ENST00000530521 C3P01024 1663 aa14.32□□□□□ -0.12
USP35-205ENST00000530521 FMN1Q68DA7 1419 aa14.3□□□□□ -0.12
USP35-205ENST00000530521 UHRF1BP1Q6BDS2 1440 aa14.3□□□□□ -0.12
USP35-205ENST00000530521 ZNF518AQ6AHZ1 1483 aa14.3□□□□□ -0.12
USP35-205ENST00000530521 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
USP35-205ENST00000530521 ABCA6Q8N139 1617 aa14.29□□□□□ -0.12
USP35-205ENST00000530521 TROQ12816 1431 aaPredicted RBP14.28□□□□□ -0.12
USP35-205ENST00000530521 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
USP35-205ENST00000530521 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
USP35-205ENST00000530521 KDM5CP41229 1560 aa14.27□□□□□ -0.12
USP35-205ENST00000530521 SOCS7O14512 581 aa14.27□□□□□ -0.13
USP35-205ENST00000530521 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
USP35-205ENST00000530521 KIDINS220Q9ULH0 1771 aa14.24□□□□□ -0.13
USP35-205ENST00000530521 CLIP1P30622 1438 aa14.24□□□□□ -0.13
USP35-205ENST00000530521 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
USP35-205ENST00000530521 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
USP35-205ENST00000530521 PTPRTO14522 1441 aa14.23□□□□□ -0.13
USP35-205ENST00000530521 CDC42BPAQ5VT25 1732 aa14.22□□□□□ -0.13
USP35-205ENST00000530521 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
USP35-205ENST00000530521 ITSN2Q9NZM3 1697 aa14.22□□□□□ -0.13
USP35-205ENST00000530521 LTBP4Q8N2S1 1624 aa14.22□□□□□ -0.13
USP35-205ENST00000530521 SUPT6HQ7KZ85 1726 aaKnown RBP14.21□□□□□ -0.13
USP35-205ENST00000530521 PREX2Q70Z35 1606 aa14.2□□□□□ -0.14
USP35-205ENST00000530521 REREQ9P2R6 1566 aa14.2□□□□□ -0.14
USP35-205ENST00000530521 ABCC1P33527 1531 aa14.2□□□□□ -0.14
USP35-205ENST00000530521 AGLP35573 1532 aa14.19□□□□□ -0.14
USP35-205ENST00000530521 ZMYM3Q14202 1370 aa14.18□□□□□ -0.14
USP35-205ENST00000530521 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
USP35-205ENST00000530521 SPATA31D1Q6ZQQ2 1576 aa14.17□□□□□ -0.14
USP35-205ENST00000530521 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
USP35-205ENST00000530521 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
USP35-205ENST00000530521 CLTCQ00610 1675 aaKnown RBP14.15□□□□□ -0.14
USP35-205ENST00000530521 SAMD9LQ8IVG5 1584 aa14.15□□□□□ -0.14
USP35-205ENST00000530521 UBAP1LF5GYI3 381 aa14.15□□□□□ -0.14
USP35-205ENST00000530521 GGT6Q6P531 493 aa14.15□□□□□ -0.14
USP35-205ENST00000530521 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
USP35-205ENST00000530521 CASKIN1Q8WXD9 1431 aa14.14□□□□□ -0.15
USP35-205ENST00000530521 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
USP35-205ENST00000530521 SYCP2Q9BX26 1530 aa14.11□□□□□ -0.15
USP35-205ENST00000530521 MROH2AA6NES4 1674 aa14.1□□□□□ -0.15
USP35-205ENST00000530521 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
USP35-205ENST00000530521 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
USP35-205ENST00000530521 ZNF644Q9H582 1327 aaPredicted RBP14.1□□□□□ -0.15
USP35-205ENST00000530521 CFDP1Q9UEE9 299 aaPredicted RBP14.09□□□□□ -0.15
USP35-205ENST00000530521 NPATQ14207 1427 aa14.08□□□□□ -0.15
USP35-205ENST00000530521 IQSEC2Q5JU85 1478 aa14.07□□□□□ -0.16
USP35-205ENST00000530521 PIP4K2BP78356 416 aa14.07□□□□□ -0.16
USP35-205ENST00000530521 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
USP35-205ENST00000530521 PTPRKQ15262 1439 aa14.07□□□□□ -0.16
USP35-205ENST00000530521 A2MP01023 1474 aa14.06□□□□□ -0.16
USP35-205ENST00000530521 ATP7AQ04656 1500 aa14.06□□□□□ -0.16
USP35-205ENST00000530521 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
USP35-205ENST00000530521 PKD2Q13563 968 aa14.06□□□□□ -0.16
USP35-205ENST00000530521 FBXO31Q5XUX0 539 aaPredicted RBP14.06□□□□□ -0.16
USP35-205ENST00000530521 PPP6R1Q9UPN7 881 aa14.04□□□□□ -0.16
USP35-205ENST00000530521 CCNB3Q8WWL7 1395 aa14.04□□□□□ -0.16
USP35-205ENST00000530521 CEP170BQ9Y4F5 1589 aaPredicted RBP14.04□□□□□ -0.16
USP35-205ENST00000530521 HSPA1LP34931 641 aa14.03□□□□□ -0.16
USP35-205ENST00000530521 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
USP35-205ENST00000530521 INO80Q9ULG1 1556 aaPredicted RBP14.03□□□□□ -0.16
USP35-205ENST00000530521 ZNF142P52746 1687 aaPredicted RBP14.03□□□□□ -0.16
USP35-205ENST00000530521 SENP3Q9H4L4 574 aaPredicted RBP14.02□□□□□ -0.17
USP35-205ENST00000530521 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
USP35-205ENST00000530521 PLXNC1O60486 1568 aa14.01□□□□□ -0.17
USP35-205ENST00000530521 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
USP35-205ENST00000530521 KIAA1107Q9UPP5 1409 aa14.01□□□□□ -0.17
USP35-205ENST00000530521 ADGBQ8N7X0 1667 aa14□□□□□ -0.17
USP35-205ENST00000530521 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
USP35-205ENST00000530521 KIF3BO15066 747 aa13.99□□□□□ -0.17
USP35-205ENST00000530521 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
USP35-205ENST00000530521 A2ML1A8K2U0 1454 aa13.97□□□□□ -0.17
USP35-205ENST00000530521 PLEKHH2Q8IVE3 1493 aa13.97□□□□□ -0.17
USP35-205ENST00000530521 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms