RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
TRIM49D1-202ENST00000530311 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
TRIM49D1-202ENST00000530311 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
TRIM49D1-202ENST00000530311 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
TRIM49D1-202ENST00000530311 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
TRIM49D1-202ENST00000530311 ABCC5O15440 1437 aa12.84□□□□□ -0.35
TRIM49D1-202ENST00000530311 DAPK1P53355 1430 aa12.83□□□□□ -0.35
TRIM49D1-202ENST00000530311 ANKRD30BQ9BXX2 1392 aa12.83□□□□□ -0.35
TRIM49D1-202ENST00000530311 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
TRIM49D1-202ENST00000530311 RBM19Q9Y4C8 960 aaKnown RBP12.82□□□□□ -0.36
TRIM49D1-202ENST00000530311 DISP1Q96F81 1524 aa12.82□□□□□ -0.36
TRIM49D1-202ENST00000530311 KIAA0556O60303 1618 aa12.81□□□□□ -0.36
TRIM49D1-202ENST00000530311 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
TRIM49D1-202ENST00000530311 NUP153P49790 1475 aaKnown RBP12.8□□□□□ -0.36
TRIM49D1-202ENST00000530311 CNTLNQ9NXG0 1405 aa12.8□□□□□ -0.36
TRIM49D1-202ENST00000530311 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
TRIM49D1-202ENST00000530311 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
TRIM49D1-202ENST00000530311 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
TRIM49D1-202ENST00000530311 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
TRIM49D1-202ENST00000530311 ANP32EQ9BTT0 268 aa12.79□□□□□ -0.36
TRIM49D1-202ENST00000530311 RPRD2Q5VT52 1461 aaKnown RBP12.78□□□□□ -0.36
TRIM49D1-202ENST00000530311 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
TRIM49D1-202ENST00000530311 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
TRIM49D1-202ENST00000530311 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
TRIM49D1-202ENST00000530311 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
TRIM49D1-202ENST00000530311 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
TRIM49D1-202ENST00000530311 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
TRIM49D1-202ENST00000530311 CFDP1Q9UEE9 299 aaPredicted RBP12.76□□□□□ -0.37
TRIM49D1-202ENST00000530311 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
TRIM49D1-202ENST00000530311 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
TRIM49D1-202ENST00000530311 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
TRIM49D1-202ENST00000530311 DNMT1P26358 1616 aaKnown RBP12.75□□□□□ -0.37
TRIM49D1-202ENST00000530311 ERCC6Q03468 1493 aa12.75□□□□□ -0.37
TRIM49D1-202ENST00000530311 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
TRIM49D1-202ENST00000530311 SPATA31E1Q6ZUB1 1445 aa12.74□□□□□ -0.37
TRIM49D1-202ENST00000530311 FBLN2P98095 1184 aa12.74□□□□□ -0.37
TRIM49D1-202ENST00000530311 RAPGEF6Q8TEU7 1601 aa12.74□□□□□ -0.37
TRIM49D1-202ENST00000530311 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
TRIM49D1-202ENST00000530311 PZPP20742 1482 aa12.73□□□□□ -0.37
TRIM49D1-202ENST00000530311 PLB1Q6P1J6 1458 aa12.73□□□□□ -0.37
TRIM49D1-202ENST00000530311 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
TRIM49D1-202ENST00000530311 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
TRIM49D1-202ENST00000530311 PKD2Q13563 968 aa12.71□□□□□ -0.37
TRIM49D1-202ENST00000530311 TROQ12816 1431 aaPredicted RBP12.71□□□□□ -0.37
TRIM49D1-202ENST00000530311 CAMSAP2Q08AD1 1489 aa12.71□□□□□ -0.38
TRIM49D1-202ENST00000530311 GPATCH8Q9UKJ3 1502 aaKnown RBP12.7□□□□□ -0.38
TRIM49D1-202ENST00000530311 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
TRIM49D1-202ENST00000530311 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
TRIM49D1-202ENST00000530311 SENP3-EIF4A1A0A087X0R7 540 aa12.69□□□□□ -0.38
TRIM49D1-202ENST00000530311 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
TRIM49D1-202ENST00000530311 KIF14Q15058 1648 aa12.68□□□□□ -0.38
TRIM49D1-202ENST00000530311 MSH5O43196 834 aa12.67□□□□□ -0.38
TRIM49D1-202ENST00000530311 JPH4Q96JJ6 628 aa12.67□□□□□ -0.38
TRIM49D1-202ENST00000530311 ZBED9Q6R2W3 1325 aa12.66□□□□□ -0.38
TRIM49D1-202ENST00000530311 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
TRIM49D1-202ENST00000530311 DHX29Q7Z478 1369 aaKnown RBP12.65□□□□□ -0.38
TRIM49D1-202ENST00000530311 USP47Q96K76 1375 aa12.65□□□□□ -0.38
TRIM49D1-202ENST00000530311 B4GALNT3Q6L9W6 998 aa12.64□□□□□ -0.39
TRIM49D1-202ENST00000530311 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
TRIM49D1-202ENST00000530311 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
TRIM49D1-202ENST00000530311 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
TRIM49D1-202ENST00000530311 NUP160Q12769 1436 aa12.63□□□□□ -0.39
TRIM49D1-202ENST00000530311 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
TRIM49D1-202ENST00000530311 BCORL1Q5H9F3 1711 aa12.63□□□□□ -0.39
TRIM49D1-202ENST00000530311 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
TRIM49D1-202ENST00000530311 NUP155O75694 1391 aa12.62□□□□□ -0.39
TRIM49D1-202ENST00000530311 PLEKHD1A6NEE1 506 aa12.62□□□□□ -0.39
TRIM49D1-202ENST00000530311 ADGRL2O95490 1459 aa12.62□□□□□ -0.39
TRIM49D1-202ENST00000530311 HNRNPMP52272 730 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM49D1-202ENST00000530311 ERICH6BQ5W0A0 696 aa12.61□□□□□ -0.39
TRIM49D1-202ENST00000530311 ADCY10Q96PN6 1610 aa12.61□□□□□ -0.39
TRIM49D1-202ENST00000530311 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
TRIM49D1-202ENST00000530311 CARMIL2Q6F5E8 1435 aa12.59□□□□□ -0.39
TRIM49D1-202ENST00000530311 ITSN2Q9NZM3 1697 aa12.59□□□□□ -0.39
TRIM49D1-202ENST00000530311 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
TRIM49D1-202ENST00000530311 POLR1AO95602 1720 aaPredicted RBP12.58□□□□□ -0.4
TRIM49D1-202ENST00000530311 ATP10BO94823 1461 aa12.58□□□□□ -0.4
TRIM49D1-202ENST00000530311 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
TRIM49D1-202ENST00000530311 C9orf84Q5VXU9 1444 aa12.58□□□□□ -0.4
TRIM49D1-202ENST00000530311 TSPY4P0CV99 314 aa12.57□□□□□ -0.4
TRIM49D1-202ENST00000530311 TSPY10P0CW01 314 aa12.57□□□□□ -0.4
TRIM49D1-202ENST00000530311 ST20-MTHFSA0A0A6YYL1 179 aa12.57□□□□□ -0.4
TRIM49D1-202ENST00000530311 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
TRIM49D1-202ENST00000530311 ABCC10Q5T3U5 1492 aa12.56□□□□□ -0.4
TRIM49D1-202ENST00000530311 ABCA8O94911 1581 aa12.56□□□□□ -0.4
TRIM49D1-202ENST00000530311 KDM5CP41229 1560 aa12.56□□□□□ -0.4
TRIM49D1-202ENST00000530311 FANCIQ9NVI1 1328 aa12.56□□□□□ -0.4
TRIM49D1-202ENST00000530311 CDC42BPAQ5VT25 1732 aa12.55□□□□□ -0.4
TRIM49D1-202ENST00000530311 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
TRIM49D1-202ENST00000530311 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
TRIM49D1-202ENST00000530311 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
TRIM49D1-202ENST00000530311 KIF15Q9NS87 1388 aa12.53□□□□□ -0.4
TRIM49D1-202ENST00000530311 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
TRIM49D1-202ENST00000530311 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
TRIM49D1-202ENST00000530311 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
TRIM49D1-202ENST00000530311 ARID4BQ4LE39 1312 aaPredicted RBP12.52□□□□□ -0.4
TRIM49D1-202ENST00000530311 CHD1O14646 1710 aa12.51□□□□□ -0.41
TRIM49D1-202ENST00000530311 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
TRIM49D1-202ENST00000530311 SHANK2Q9UPX8 1470 aa12.5□□□□□ -0.41
TRIM49D1-202ENST00000530311 NBPF1Q3BBV0 1214 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms