RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
CTSB-216ENST00000530290 YEATS2Q9ULM3 1422 aa9.53□□□□□ -0.88
CTSB-216ENST00000530290 IQSEC2Q5JU85 1478 aa9.53□□□□□ -0.88
CTSB-216ENST00000530290 ARID3CA6NKF2 412 aa9.52□□□□□ -0.89
CTSB-216ENST00000530290 MYO5CQ9NQX4 1742 aa9.52□□□□□ -0.89
CTSB-216ENST00000530290 REREQ9P2R6 1566 aa9.52□□□□□ -0.89
CTSB-216ENST00000530290 SIGLEC1Q9BZZ2 1709 aa9.51□□□□□ -0.89
CTSB-216ENST00000530290 ATP10AO60312 1499 aa9.51□□□□□ -0.89
CTSB-216ENST00000530290 ZNF518AQ6AHZ1 1483 aa9.51□□□□□ -0.89
CTSB-216ENST00000530290 PLCH2O75038 1416 aa9.5□□□□□ -0.89
CTSB-216ENST00000530290 UHRF1BP1Q6BDS2 1440 aa9.5□□□□□ -0.89
CTSB-216ENST00000530290 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
CTSB-216ENST00000530290 KDM5CP41229 1560 aa9.5□□□□□ -0.89
CTSB-216ENST00000530290 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
CTSB-216ENST00000530290 PTPRTO14522 1441 aa9.48□□□□□ -0.89
CTSB-216ENST00000530290 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
CTSB-216ENST00000530290 STRCQ7RTU9 1775 aa9.48□□□□□ -0.89
CTSB-216ENST00000530290 KIF14Q15058 1648 aa9.47□□□□□ -0.89
CTSB-216ENST00000530290 CDK11AQ9UQ88 783 aaPredicted RBP9.46□□□□□ -0.9
CTSB-216ENST00000530290 FMN1Q68DA7 1419 aa9.46□□□□□ -0.9
CTSB-216ENST00000530290 AGLP35573 1532 aa9.46□□□□□ -0.9
CTSB-216ENST00000530290 EFCAB2Q5VUJ9 269 aa9.45□□□□□ -0.9
CTSB-216ENST00000530290 CNTLNQ9NXG0 1405 aa9.45□□□□□ -0.9
CTSB-216ENST00000530290 CLIP1P30622 1438 aa9.44□□□□□ -0.9
CTSB-216ENST00000530290 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
CTSB-216ENST00000530290 DIP2CQ9Y2E4 1556 aa9.44□□□□□ -0.9
CTSB-216ENST00000530290 C3P01024 1663 aa9.44□□□□□ -0.9
CTSB-216ENST00000530290 MLH3Q9UHC1 1453 aa9.43□□□□□ -0.9
CTSB-216ENST00000530290 MLECQ14165 292 aa9.43□□□□□ -0.9
CTSB-216ENST00000530290 MROH2AA6NES4 1674 aa9.42□□□□□ -0.9
CTSB-216ENST00000530290 ARHGAP5Q13017 1502 aa9.42□□□□□ -0.9
CTSB-216ENST00000530290 TROQ12816 1431 aaPredicted RBP9.41□□□□□ -0.9
CTSB-216ENST00000530290 NPATQ14207 1427 aa9.41□□□□□ -0.9
CTSB-216ENST00000530290 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
CTSB-216ENST00000530290 PLPPR3Q6T4P5 718 aa9.41□□□□□ -0.9
CTSB-216ENST00000530290 ABCA6Q8N139 1617 aa9.41□□□□□ -0.9
CTSB-216ENST00000530290 LTBP4Q8N2S1 1624 aa9.41□□□□□ -0.9
CTSB-216ENST00000530290 NCOA1Q15788 1441 aa9.4□□□□□ -0.9
CTSB-216ENST00000530290 PREX2Q70Z35 1606 aa9.4□□□□□ -0.9
CTSB-216ENST00000530290 ESF1Q9H501 851 aaKnown RBP9.39□□□□□ -0.91
CTSB-216ENST00000530290 ABCC1P33527 1531 aa9.39□□□□□ -0.91
CTSB-216ENST00000530290 ZNF142P52746 1687 aaPredicted RBP9.39□□□□□ -0.91
CTSB-216ENST00000530290 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
CTSB-216ENST00000530290 CDC42BPBQ9Y5S2 1711 aa9.38□□□□□ -0.91
CTSB-216ENST00000530290 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
CTSB-216ENST00000530290 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
CTSB-216ENST00000530290 MED1Q15648 1581 aaPredicted RBP9.36□□□□□ -0.91
CTSB-216ENST00000530290 KIDINS220Q9ULH0 1771 aa9.35□□□□□ -0.91
CTSB-216ENST00000530290 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
CTSB-216ENST00000530290 CAMSAP1Q5T5Y3 1602 aa9.34□□□□□ -0.91
CTSB-216ENST00000530290 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.91
CTSB-216ENST00000530290 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
CTSB-216ENST00000530290 AFAP1Q8N556 730 aa9.33□□□□□ -0.92
CTSB-216ENST00000530290 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
CTSB-216ENST00000530290 MYO3AQ8NEV4 1616 aa9.33□□□□□ -0.92
CTSB-216ENST00000530290 CDC42BPAQ5VT25 1732 aa9.32□□□□□ -0.92
CTSB-216ENST00000530290 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
CTSB-216ENST00000530290 PKD2Q13563 968 aa9.32□□□□□ -0.92
CTSB-216ENST00000530290 PLEKHH2Q8IVE3 1493 aa9.32□□□□□ -0.92
CTSB-216ENST00000530290 PLXNC1O60486 1568 aa9.32□□□□□ -0.92
CTSB-216ENST00000530290 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
CTSB-216ENST00000530290 FAM135AQ9P2D6 1515 aa9.31□□□□□ -0.92
CTSB-216ENST00000530290 LRRIQ1Q96JM4 1722 aa9.31□□□□□ -0.92
CTSB-216ENST00000530290 TCOF1Q13428 1488 aaKnown RBP9.31□□□□□ -0.92
CTSB-216ENST00000530290 SAMD9LQ8IVG5 1584 aa9.31□□□□□ -0.92
CTSB-216ENST00000530290 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
CTSB-216ENST00000530290 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
CTSB-216ENST00000530290 CASKIN1Q8WXD9 1431 aa9.3□□□□□ -0.92
CTSB-216ENST00000530290 HSPA1LP34931 641 aa9.29□□□□□ -0.92
CTSB-216ENST00000530290 CPS1P31327 1500 aa9.29□□□□□ -0.92
CTSB-216ENST00000530290 ATP7AQ04656 1500 aa9.29□□□□□ -0.92
CTSB-216ENST00000530290 KIAA1107Q9UPP5 1409 aa9.29□□□□□ -0.92
CTSB-216ENST00000530290 INO80Q9ULG1 1556 aaPredicted RBP9.29□□□□□ -0.92
CTSB-216ENST00000530290 FYCO1Q9BQS8 1478 aa9.28□□□□□ -0.92
CTSB-216ENST00000530290 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
CTSB-216ENST00000530290 ZMYM3Q14202 1370 aa9.28□□□□□ -0.92
CTSB-216ENST00000530290 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
CTSB-216ENST00000530290 CLTCQ00610 1675 aaKnown RBP9.28□□□□□ -0.92
CTSB-216ENST00000530290 ADGBQ8N7X0 1667 aa9.28□□□□□ -0.92
CTSB-216ENST00000530290 SYCP2Q9BX26 1530 aa9.27□□□□□ -0.93
CTSB-216ENST00000530290 PTPRKQ15262 1439 aa9.26□□□□□ -0.93
CTSB-216ENST00000530290 UBTFP17480 764 aaKnown RBP9.26□□□□□ -0.93
CTSB-216ENST00000530290 A2ML1A8K2U0 1454 aa9.26□□□□□ -0.93
CTSB-216ENST00000530290 A2MP01023 1474 aa9.26□□□□□ -0.93
CTSB-216ENST00000530290 SPAG9O60271 1321 aaKnown RBP9.26□□□□□ -0.93
CTSB-216ENST00000530290 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
CTSB-216ENST00000530290 ZNF335Q9H4Z2 1342 aaPredicted RBP9.24□□□□□ -0.93
CTSB-216ENST00000530290 GPATCH8Q9UKJ3 1502 aaKnown RBP9.23□□□□□ -0.93
CTSB-216ENST00000530290 DNMT1P26358 1616 aaKnown RBP9.23□□□□□ -0.93
CTSB-216ENST00000530290 TOM1O60784 492 aa9.22□□□□□ -0.93
CTSB-216ENST00000530290 PHF23Q9BUL5 403 aaPredicted RBP9.22□□□□□ -0.93
CTSB-216ENST00000530290 SYNMO15061 1565 aa9.21□□□□□ -0.93
CTSB-216ENST00000530290 DEPDC5O75140 1603 aa9.21□□□□□ -0.93
CTSB-216ENST00000530290 NCKAP5LQ9HCH0 1330 aa9.21□□□□□ -0.94
CTSB-216ENST00000530290 RTEL1-TNFRSF6BF6WH68 1400 aa9.21□□□□□ -0.94
CTSB-216ENST00000530290 PZPP20742 1482 aa9.21□□□□□ -0.94
CTSB-216ENST00000530290 KDM5DQ9BY66 1539 aa9.21□□□□□ -0.94
CTSB-216ENST00000530290 NEURL4Q96JN8 1562 aa9.2□□□□□ -0.94
CTSB-216ENST00000530290 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
CTSB-216ENST00000530290 SHANK2Q9UPX8 1470 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms