RNA–Protein interactions for RNA: ENST00000530267.5

USP35-204, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2 BASIC

Gene USP35, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-204ENST00000530267 ABCC5O15440 1437 aa21.69■■□□□ 1.06
USP35-204ENST00000530267 KIF14Q15058 1648 aa21.68■■□□□ 1.06
USP35-204ENST00000530267 DDX10Q13206 875 aaKnown RBP21.66■■□□□ 1.06
USP35-204ENST00000530267 MPHOSPH9Q99550 1183 aa21.66■■□□□ 1.06
USP35-204ENST00000530267 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
USP35-204ENST00000530267 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
USP35-204ENST00000530267 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.05
USP35-204ENST00000530267 DNMT1P26358 1616 aaKnown RBP21.63■■□□□ 1.05
USP35-204ENST00000530267 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
USP35-204ENST00000530267 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
USP35-204ENST00000530267 ATP10BO94823 1461 aa21.62■■□□□ 1.05
USP35-204ENST00000530267 ABCA8O94911 1581 aa21.6■■□□□ 1.05
USP35-204ENST00000530267 PTPRGP23470 1445 aa21.6■■□□□ 1.05
USP35-204ENST00000530267 CHD1O14646 1710 aa21.6■■□□□ 1.05
USP35-204ENST00000530267 ROCK1Q13464 1354 aa21.59■■□□□ 1.05
USP35-204ENST00000530267 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
USP35-204ENST00000530267 ADCY10Q96PN6 1610 aa21.55■■□□□ 1.04
USP35-204ENST00000530267 KCNH8Q96L42 1107 aa21.54■■□□□ 1.04
USP35-204ENST00000530267 SLC4A1APQ9BWU0 796 aaKnown RBP21.54■■□□□ 1.04
USP35-204ENST00000530267 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
USP35-204ENST00000530267 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
USP35-204ENST00000530267 ABCC10Q5T3U5 1492 aa21.48■■□□□ 1.03
USP35-204ENST00000530267 CDC42BPAQ5VT25 1732 aa21.48■■□□□ 1.03
USP35-204ENST00000530267 L3MBTL2Q969R5 705 aa21.48■■□□□ 1.03
USP35-204ENST00000530267 HNRNPMP52272 730 aaKnown RBP eCLIP21.46■■□□□ 1.03
USP35-204ENST00000530267 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
USP35-204ENST00000530267 ANKRD30BQ9BXX2 1392 aa21.44■■□□□ 1.02
USP35-204ENST00000530267 ANKRD30AQ9BXX3 1397 aa21.44■■□□□ 1.02
USP35-204ENST00000530267 ADGBQ8N7X0 1667 aa21.42■■□□□ 1.02
USP35-204ENST00000530267 CROCC2H7BZ55 1655 aa21.41■■□□□ 1.02
USP35-204ENST00000530267 TSPY4P0CV99 314 aa21.41■■□□□ 1.02
USP35-204ENST00000530267 TSPY10P0CW01 314 aa21.41■■□□□ 1.02
USP35-204ENST00000530267 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.02
USP35-204ENST00000530267 PZPP20742 1482 aa21.39■■□□□ 1.01
USP35-204ENST00000530267 C9orf84Q5VXU9 1444 aa21.39■■□□□ 1.01
USP35-204ENST00000530267 ADGRL2O95490 1459 aa21.38■■□□□ 1.01
USP35-204ENST00000530267 ANKRD50Q9ULJ7 1429 aa21.38■■□□□ 1.01
USP35-204ENST00000530267 SHROOM2Q13796 1616 aa21.38■■□□□ 1.01
USP35-204ENST00000530267 PKD2Q13563 968 aa21.37■■□□□ 1.01
USP35-204ENST00000530267 RPRD2Q5VT52 1461 aaKnown RBP21.37■■□□□ 1.01
USP35-204ENST00000530267 ANP32CO43423 234 aa21.35■■□□□ 1.01
USP35-204ENST00000530267 NBPF8Q3BBV2 869 aa21.35■■□□□ 1.01
USP35-204ENST00000530267 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1
USP35-204ENST00000530267 NUP155O75694 1391 aa21.32■■□□□ 1
USP35-204ENST00000530267 CDC42BPBQ9Y5S2 1711 aa21.31■■□□□ 1
USP35-204ENST00000530267 KIF15Q9NS87 1388 aa21.3■■□□□ 1
USP35-204ENST00000530267 TEX14Q8IWB6 1497 aa21.3■■□□□ 1
USP35-204ENST00000530267 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
USP35-204ENST00000530267 SAMD9LQ8IVG5 1584 aa21.29■■□□□ 1
USP35-204ENST00000530267 MBD5Q9P267 1494 aa21.29■■□□□ 1
USP35-204ENST00000530267 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
USP35-204ENST00000530267 TTC37Q6PGP7 1564 aa21.29■■□□□ 1
USP35-204ENST00000530267 WASHC2AQ641Q2 1341 aa21.28■■□□□ 1
USP35-204ENST00000530267 ABCC2Q92887 1545 aa21.28■■□□□ 1
USP35-204ENST00000530267 SHANK2Q9UPX8 1470 aa21.28■■□□□ 1
USP35-204ENST00000530267 ARHGAP5Q13017 1502 aa21.27■■□□□ 1
USP35-204ENST00000530267 PREX2Q70Z35 1606 aa21.27■□□□□ 0.99
USP35-204ENST00000530267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.26■□□□□ 0.99
USP35-204ENST00000530267 CCDC141Q6ZP82 1450 aa21.24■□□□□ 0.99
USP35-204ENST00000530267 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
USP35-204ENST00000530267 CLASP1Q7Z460 1538 aa21.23■□□□□ 0.99
USP35-204ENST00000530267 ARHGEF5Q12774 1597 aa21.23■□□□□ 0.99
USP35-204ENST00000530267 C11orf95C9JLR9 678 aaPredicted RBP21.23■□□□□ 0.99
USP35-204ENST00000530267 PELP1Q8IZL8 1130 aaKnown RBP21.2■□□□□ 0.98
USP35-204ENST00000530267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.19■□□□□ 0.98
USP35-204ENST00000530267 CCER2I3L3R5 266 aa21.18■□□□□ 0.98
USP35-204ENST00000530267 RSPH4AQ5TD94 716 aa21.17■□□□□ 0.98
USP35-204ENST00000530267 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
USP35-204ENST00000530267 MYO5CQ9NQX4 1742 aa21.15■□□□□ 0.98
USP35-204ENST00000530267 KDM2AQ9Y2K7 1162 aa21.15■□□□□ 0.98
USP35-204ENST00000530267 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
USP35-204ENST00000530267 ARHGEF12Q9NZN5 1544 aa21.11■□□□□ 0.97
USP35-204ENST00000530267 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
USP35-204ENST00000530267 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
USP35-204ENST00000530267 SPATA31E1Q6ZUB1 1445 aa21.09■□□□□ 0.97
USP35-204ENST00000530267 KDM5DQ9BY66 1539 aa21.09■□□□□ 0.97
USP35-204ENST00000530267 PLCH2O75038 1416 aa21.09■□□□□ 0.97
USP35-204ENST00000530267 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
USP35-204ENST00000530267 DCAF11Q8TEB1 546 aa21.08■□□□□ 0.97
USP35-204ENST00000530267 UHRF1BP1LA0JNW5 1464 aa21.08■□□□□ 0.97
USP35-204ENST00000530267 KIF7Q2M1P5 1343 aa21.08■□□□□ 0.97
USP35-204ENST00000530267 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
USP35-204ENST00000530267 PLEKHH2Q8IVE3 1493 aa21.06■□□□□ 0.96
USP35-204ENST00000530267 USP47Q96K76 1375 aa21.06■□□□□ 0.96
USP35-204ENST00000530267 CNGB1Q14028 1251 aaPredicted RBP21.05■□□□□ 0.96
USP35-204ENST00000530267 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
USP35-204ENST00000530267 SUPT16HQ9Y5B9 1047 aaKnown RBP21.05■□□□□ 0.96
USP35-204ENST00000530267 AFAP1Q8N556 730 aa21.03■□□□□ 0.96
USP35-204ENST00000530267 TRAPPC8Q9Y2L5 1435 aa21.03■□□□□ 0.96
USP35-204ENST00000530267 MAST1Q9Y2H9 1570 aa21.02■□□□□ 0.96
USP35-204ENST00000530267 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
USP35-204ENST00000530267 CCDC184Q52MB2 194 aa21.01■□□□□ 0.95
USP35-204ENST00000530267 CCDC144AA2RUR9 1427 aa20.99■□□□□ 0.95
USP35-204ENST00000530267 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
USP35-204ENST00000530267 PRKRIP1Q9H875 184 aaPredicted RBP20.97■□□□□ 0.95
USP35-204ENST00000530267 ABCC1P33527 1531 aa20.97■□□□□ 0.95
USP35-204ENST00000530267 SPAG9O60271 1321 aaKnown RBP20.97■□□□□ 0.95
USP35-204ENST00000530267 HNRNPUQ00839 825 aaKnown RBP eCLIP20.96■□□□□ 0.95
USP35-204ENST00000530267 DUOX2Q9NRD8 1548 aa20.96■□□□□ 0.95
USP35-204ENST00000530267 UHRF1BP1Q6BDS2 1440 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms