RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
CMTM1-214ENST00000530141 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-214ENST00000530141 CLIP1P30622 1438 aa12.78□□□□□ -0.36
CMTM1-214ENST00000530141 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
CMTM1-214ENST00000530141 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.36
CMTM1-214ENST00000530141 ARID3CA6NKF2 412 aa12.77□□□□□ -0.37
CMTM1-214ENST00000530141 RIMS1Q86UR5 1692 aaKnown RBP12.76□□□□□ -0.37
CMTM1-214ENST00000530141 ABCA8O94911 1581 aa12.75□□□□□ -0.37
CMTM1-214ENST00000530141 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
CMTM1-214ENST00000530141 CTTNBP2Q8WZ74 1663 aa12.75□□□□□ -0.37
CMTM1-214ENST00000530141 ILDR2Q71H61 639 aa12.74□□□□□ -0.37
CMTM1-214ENST00000530141 FRMPD1Q5SYB0 1578 aa12.73□□□□□ -0.37
CMTM1-214ENST00000530141 HSPA2P54652 639 aa12.72□□□□□ -0.37
CMTM1-214ENST00000530141 POLA2Q14181 598 aa12.71□□□□□ -0.37
CMTM1-214ENST00000530141 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
CMTM1-214ENST00000530141 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
CMTM1-214ENST00000530141 VPS8Q8N3P4 1428 aa12.7□□□□□ -0.38
CMTM1-214ENST00000530141 ARAP3Q8WWN8 1544 aa12.68□□□□□ -0.38
CMTM1-214ENST00000530141 RAPGEF3O95398 923 aa12.68□□□□□ -0.38
CMTM1-214ENST00000530141 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
CMTM1-214ENST00000530141 ABCA9Q8IUA7 1624 aa12.66□□□□□ -0.38
CMTM1-214ENST00000530141 ARID4BQ4LE39 1312 aaPredicted RBP12.65□□□□□ -0.38
CMTM1-214ENST00000530141 ARHGEF40Q8TER5 1519 aa12.64□□□□□ -0.39
CMTM1-214ENST00000530141 SPATA31D1Q6ZQQ2 1576 aa12.61□□□□□ -0.39
CMTM1-214ENST00000530141 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
CMTM1-214ENST00000530141 CERKQ8TCT0 537 aa12.61□□□□□ -0.39
CMTM1-214ENST00000530141 ATP10BO94823 1461 aa12.6□□□□□ -0.39
CMTM1-214ENST00000530141 RICTORQ6R327 1708 aa12.6□□□□□ -0.39
CMTM1-214ENST00000530141 FER1L4A9Z1Z3 1794 aa12.59□□□□□ -0.39
CMTM1-214ENST00000530141 EFCAB5A4FU69 1503 aa12.59□□□□□ -0.39
CMTM1-214ENST00000530141 SOCS7O14512 581 aa12.58□□□□□ -0.4
CMTM1-214ENST00000530141 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
CMTM1-214ENST00000530141 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
CMTM1-214ENST00000530141 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
CMTM1-214ENST00000530141 MLECQ14165 292 aa12.55□□□□□ -0.4
CMTM1-214ENST00000530141 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
CMTM1-214ENST00000530141 NEO1Q92859 1461 aa12.54□□□□□ -0.4
CMTM1-214ENST00000530141 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
CMTM1-214ENST00000530141 ZFYVE16Q7Z3T8 1539 aa12.52□□□□□ -0.41
CMTM1-214ENST00000530141 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.41
CMTM1-214ENST00000530141 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
CMTM1-214ENST00000530141 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
CMTM1-214ENST00000530141 FANCAO15360 1455 aa12.5□□□□□ -0.41
CMTM1-214ENST00000530141 DENND4BO75064 1496 aaPredicted RBP12.5□□□□□ -0.41
CMTM1-214ENST00000530141 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
CMTM1-214ENST00000530141 SAMD9Q5K651 1589 aa12.48□□□□□ -0.41
CMTM1-214ENST00000530141 ZMYM4Q5VZL5 1548 aa12.48□□□□□ -0.41
CMTM1-214ENST00000530141 NUP153P49790 1475 aaKnown RBP12.48□□□□□ -0.41
CMTM1-214ENST00000530141 FMN1Q68DA7 1419 aa12.48□□□□□ -0.41
CMTM1-214ENST00000530141 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
CMTM1-214ENST00000530141 HRCP23327 699 aa12.47□□□□□ -0.41
CMTM1-214ENST00000530141 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
CMTM1-214ENST00000530141 PPARGC1BQ86YN6 1023 aaKnown RBP12.47□□□□□ -0.41
CMTM1-214ENST00000530141 AKNAQ7Z591 1439 aa12.46□□□□□ -0.41
CMTM1-214ENST00000530141 PHLDB1Q86UU1 1377 aa12.46□□□□□ -0.41
CMTM1-214ENST00000530141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.46□□□□□ -0.42
CMTM1-214ENST00000530141 CFAP74Q9C0B2 1584 aa12.45□□□□□ -0.42
CMTM1-214ENST00000530141 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
CMTM1-214ENST00000530141 FHOD3Q2V2M9 1422 aa12.45□□□□□ -0.42
CMTM1-214ENST00000530141 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
CMTM1-214ENST00000530141 POGZQ7Z3K3 1410 aa12.44□□□□□ -0.42
CMTM1-214ENST00000530141 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
CMTM1-214ENST00000530141 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
CMTM1-214ENST00000530141 POTEHQ6S545 545 aa12.4□□□□□ -0.42
CMTM1-214ENST00000530141 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
CMTM1-214ENST00000530141 LTBP4Q8N2S1 1624 aa12.4□□□□□ -0.42
CMTM1-214ENST00000530141 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
CMTM1-214ENST00000530141 C3P01024 1663 aa12.38□□□□□ -0.43
CMTM1-214ENST00000530141 UHRF1BP1Q6BDS2 1440 aa12.37□□□□□ -0.43
CMTM1-214ENST00000530141 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
CMTM1-214ENST00000530141 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
CMTM1-214ENST00000530141 LRRC9Q6ZRR7 1453 aa12.35□□□□□ -0.43
CMTM1-214ENST00000530141 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
CMTM1-214ENST00000530141 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
CMTM1-214ENST00000530141 ATP10AO60312 1499 aa12.34□□□□□ -0.43
CMTM1-214ENST00000530141 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
CMTM1-214ENST00000530141 KIF14Q15058 1648 aa12.33□□□□□ -0.43
CMTM1-214ENST00000530141 ABCA6Q8N139 1617 aa12.33□□□□□ -0.43
CMTM1-214ENST00000530141 RRBP1Q9P2E9 1410 aaKnown RBP12.33□□□□□ -0.44
CMTM1-214ENST00000530141 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.44
CMTM1-214ENST00000530141 MAGI2Q86UL8 1455 aa12.33□□□□□ -0.44
CMTM1-214ENST00000530141 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
CMTM1-214ENST00000530141 ATP1B4Q9UN42 357 aaPredicted RBP12.31□□□□□ -0.44
CMTM1-214ENST00000530141 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
CMTM1-214ENST00000530141 PTPRTO14522 1441 aa12.29□□□□□ -0.44
CMTM1-214ENST00000530141 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
CMTM1-214ENST00000530141 MED1Q15648 1581 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-214ENST00000530141 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
CMTM1-214ENST00000530141 MTUS2Q5JR59 1369 aa12.28□□□□□ -0.44
CMTM1-214ENST00000530141 PLCH2O75038 1416 aa12.28□□□□□ -0.44
CMTM1-214ENST00000530141 NCOA1Q15788 1441 aa12.28□□□□□ -0.44
CMTM1-214ENST00000530141 KDM5CP41229 1560 aa12.27□□□□□ -0.44
CMTM1-214ENST00000530141 CAMSAP1Q5T5Y3 1602 aa12.27□□□□□ -0.44
CMTM1-214ENST00000530141 ZNF335Q9H4Z2 1342 aaPredicted RBP12.27□□□□□ -0.45
CMTM1-214ENST00000530141 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.45
CMTM1-214ENST00000530141 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
CMTM1-214ENST00000530141 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
CMTM1-214ENST00000530141 AFAP1Q8N556 730 aa12.25□□□□□ -0.45
CMTM1-214ENST00000530141 MYT1LQ9UL68 1186 aa12.25□□□□□ -0.45
CMTM1-214ENST00000530141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms